FFCP PHASE1:Hg19::chr10:102792137..102792186,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81855 | |EntrezGene=81855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16087 | |HGNC=16087 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_uc001ksq.2,uc010qpx.1_5end | |association_with_transcript=66bp_to_uc001ksq.2,uc010qpx.1_5end | ||
|cluster_id=chr10:102792137..102792186,+ | |||
|description=CAGE_peak_1_at_SFXN3_5end | |description=CAGE_peak_1_at_SFXN3_5end | ||
|id=chr10:102792137..102792186,+ | |id=chr10:102792137..102792186,+ |
Latest revision as of 22:38, 15 September 2015
Short description: | p1@SFXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFXN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_uc001ksq.2, uc010qpx.1_5end |
EntrezGene: | SFXN3 |
HGNC: | 16087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SFXN3 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.95e-19 | 121 |
multi fate stem cell | 8.30e-16 | 427 |
somatic stem cell | 2.71e-15 | 433 |
stem cell | 1.39e-13 | 441 |
fibroblast | 1.66e-13 | 76 |
endothelial cell | 9.22e-13 | 36 |
smooth muscle cell | 1.32e-12 | 43 |
smooth muscle myoblast | 1.32e-12 | 43 |
meso-epithelial cell | 1.63e-11 | 45 |
muscle precursor cell | 6.97e-11 | 58 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
vasculature | 7.22e-22 | 78 |
vascular system | 7.22e-22 | 78 |
mesoderm | 6.83e-20 | 315 |
mesoderm-derived structure | 6.83e-20 | 315 |
presumptive mesoderm | 6.83e-20 | 315 |
vessel | 1.41e-19 | 68 |
musculoskeletal system | 3.25e-19 | 167 |
lateral plate mesoderm | 4.66e-19 | 203 |
epithelial tube open at both ends | 4.25e-17 | 59 |
blood vessel | 4.25e-17 | 59 |
Showing 1 to 10 of 62 entries