FFCP PHASE1:Hg19::chr5:10442062..10442111,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:10442062..10442111,+
|short_description=p2@ROPN1L
|description=CAGE_peak_2_at_ROPN1L_5end
|association_with_transcript=0bp_to_ENST00000515762_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83853 | |EntrezGene=83853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24060 | |HGNC=24060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000515762_5end | |||
|cluster_id=chr5:10442062..10442111,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_ROPN1L_5end | |||
|id=chr5:10442062..10442111,+ | |||
|ontology_enrichment_celltype=CL:0000094!4.74e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.02e-29;8!CL:0000081;3.80e-21;11!CL:0000775;8.46e-21;3!CL:0000771;2.63e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.18e-29,8;CL:0000081,3.94e-21,11;CL:0000775,8.47e-21,3;CL:0000771,2.46e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-14!115;UBERON:0001049!1.49e-10!57;UBERON:0005068!1.49e-10!57;UBERON:0006241!1.49e-10!57;UBERON:0007135!1.49e-10!57;UBERON:0000955!2.57e-09!69;UBERON:0006238!2.57e-09!69;UBERON:0001017!2.85e-09!82;UBERON:0005743!2.02e-08!86;UBERON:0002616!3.85e-08!59;UBERON:0000073!7.04e-08!94;UBERON:0001016!7.04e-08!94;UBERON:0002780!1.61e-07!41;UBERON:0001890!1.61e-07!41;UBERON:0006240!1.61e-07!41;UBERON:0003080!3.21e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.82e-14;2!UBERON:0001896;9.51e-10;3!UBERON:0005290;9.51e-10;3!UBERON:0002171;5.51e-08;1!UBERON:0006518;5.51e-08;1!UBERON:0008949;5.51e-08;1!UBERON:0000101;5.51e-08;1!UBERON:0002167;5.51e-08;1!UBERON:0001301;6.52e-08;1!UBERON:0002336;1.44e-07;1!UBERON:0005795;1.44e-07;1!UBERON:0002084;1.44e-07;1!UBERON:0011215;1.44e-07;1!UBERON:0001018;1.44e-07;1!UBERON:0002082;1.44e-07;1!UBERON:0002473;1.44e-07;1!UBERON:0005340;1.44e-07;1!UBERON:0003544;1.44e-07;1!UBERON:0005970;1.44e-07;1!UBERON:0002316;1.44e-07;1!UBERON:0001020;1.44e-07;1!UBERON:0002437;1.44e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.77e-14,2;UBERON:0001896,9.72e-10,3;UBERON:0005290,9.72e-10,3;UBERON:0010096,9.72e-10,3;UBERON:0007023,1.93e-08,114;UBERON:0002171,5.70e-08,1;UBERON:0006518,5.70e-08,1;UBERON:0008949,5.70e-08,1;UBERON:0000101,5.70e-08,1;UBERON:0002167,5.70e-08,1;UBERON:0001301,6.97e-08,1;UBERON:0002336,1.44e-07,1;UBERON:0011215,1.44e-07,1;UBERON:0001018,1.44e-07,1;UBERON:0002473,1.44e-07,1;UBERON:0005340,1.44e-07,1;UBERON:0003544,1.44e-07,1;UBERON:0005970,1.44e-07,1;UBERON:0002316,1.44e-07,1;UBERON:0001020,1.44e-07,1;UBERON:0002437,1.44e-07,1;UBERON:0002084,1.54e-07,1;UBERON:0002082,1.54e-07,1;UBERON:0010226,1.54e-07,1 | |||
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| ||
|short_description=p2@ROPN1L | |||
}} | }} |
Latest revision as of 14:19, 19 September 2015
Short description: | p2@ROPN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ROPN1L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000515762_5end |
EntrezGene: | ROPN1L |
HGNC: | 24060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.18e-29 | 8 |
blood cell | 3.94e-21 | 11 |
neutrophil | 8.47e-21 | 3 |
eosinophil | 2.46e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.77e-14 | 2 |
medulla oblongata | 9.72e-10 | 3 |
myelencephalon | 9.72e-10 | 3 |
future myelencephalon | 9.72e-10 | 3 |
adult organism | 1.93e-08 | 114 |
lower lobe of right lung | 5.70e-08 | 1 |
right lung lobe | 5.70e-08 | 1 |
lower lobe of lung | 5.70e-08 | 1 |
lobe of lung | 5.70e-08 | 1 |
right lung | 5.70e-08 | 1 |
epididymis | 6.97e-08 | 1 |
corpus callosum | 1.44e-07 | 1 |
central nervous system cell part cluster | 1.44e-07 | 1 |
axon tract | 1.44e-07 | 1 |
intercerebral commissure | 1.44e-07 | 1 |
dorsal telencephalic commissure | 1.44e-07 | 1 |
brain white matter | 1.44e-07 | 1 |
brain commissure | 1.44e-07 | 1 |
white matter | 1.44e-07 | 1 |
nervous system commissure | 1.44e-07 | 1 |
cerebral hemisphere white matter | 1.44e-07 | 1 |
heart left ventricle | 1.54e-07 | 1 |
cardiac ventricle | 1.54e-07 | 1 |
future cardiac ventricle | 1.54e-07 | 1 |