FFCP PHASE1:Hg19::chr18:53089493..53089517,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=205bp_to_NM_001243233,uc010xdw.1_5end | |association_with_transcript=205bp_to_NM_001243233,uc010xdw.1_5end | ||
|cluster_id=chr18:53089493..53089517,- | |||
|coexpression_cluster_id=C2465 | |coexpression_cluster_id=C2465 | ||
|description=CAGE_peak_15_at_TCF4_5end | |description=CAGE_peak_15_at_TCF4_5end |
Latest revision as of 21:03, 19 September 2015
Short description: | p15@TCF4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TCF4_5end |
Coexpression cluster: | C2465_small_peripheral_acute_lymphoma_diffuse_Neural_merkel |
Association with transcript: | 205bp_to_NM_001243233, uc010xdw.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p15@TCF4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.51e-09 | 6 |
endothelial cell of lymphatic vessel | 3.51e-09 | 6 |
vascular lymphangioblast | 3.51e-09 | 6 |
neuronal stem cell | 2.76e-07 | 8 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-14 | 114 |
nervous system | 1.31e-14 | 89 |
central nervous system | 3.84e-12 | 81 |
ectoderm-derived structure | 6.03e-12 | 171 |
ectoderm | 6.03e-12 | 171 |
presumptive ectoderm | 6.03e-12 | 171 |
organ system subdivision | 2.02e-11 | 223 |
neural tube | 2.95e-10 | 56 |
neural rod | 2.95e-10 | 56 |
future spinal cord | 2.95e-10 | 56 |
Showing 1 to 10 of 34 entries