FFCP PHASE1:Hg19::chr5:176433693..176433812,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:176433693..176433812,-
|short_description=p1@UIMC1
|description=CAGE_peak_1_at_UIMC1_5end
|association_with_transcript=0bp_to_ENST00000323774,ENST000003772...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51720 | |EntrezGene=51720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30298 | |HGNC=30298 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2T8,D6RDZ5,D6RCF3,D6RCQ3,Q96RL1 | |UniProt=F2Z2T8,D6RDZ5,D6RCF3,D6RCQ3,Q96RL1 | ||
|association_with_transcript=0bp_to_ENST00000323774,ENST00000377220,ENST00000507513,ENST00000510698,ENST00000511320,ENST00000512031,NM_001199297,NM_001199298,uc003mfc.1,uc003mfd.1,uc003mfg.1,uc003mfh.1,uc010jkj.1_5end | |||
|cluster_id=chr5:176433693..176433812,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_UIMC1_5end | |||
|id=chr5:176433693..176433812,- | |||
|ontology_enrichment_celltype=CL:0000037!2.14e-38!172;CL:0000566!2.14e-38!172;CL:0000738!1.09e-35!140;CL:0002032!1.75e-35!165;CL:0000837!1.75e-35!165;CL:0000988!1.12e-33!182;CL:0002087!3.61e-29!119;CL:0002031!9.16e-29!124;CL:0002057!2.30e-20!42;CL:0000860!3.82e-20!45;CL:0000763!2.02e-19!112;CL:0000049!2.02e-19!112;CL:0000766!3.91e-16!76;CL:0000542!3.13e-15!53;CL:0000051!3.13e-15!53;CL:0000838!3.34e-15!52;CL:0002009!2.32e-13!65;CL:0000557!3.34e-13!71;CL:0000839!4.84e-13!70;CL:0002194!1.17e-12!63;CL:0000576!1.17e-12!63;CL:0000040!1.17e-12!63;CL:0000559!1.17e-12!63;CL:0000945!5.62e-10!24;CL:0000826!5.62e-10!24;CL:0000236!9.80e-09!14;CL:0000791!2.39e-07!18;CL:0000789!2.39e-07!18;CL:0002420!2.39e-07!18;CL:0002419!2.39e-07!18;CL:0000790!2.39e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-16;33!CL:0002057;2.54e-16;33!CL:0000576;1.12e-12;48!CL:0002087;4.10e-11;104!CL:0000945;6.81e-10;24!CL:0000542;2.15e-09;53!CL:0000473;2.70e-09;39!CL:0000234;2.70e-09;39!CL:0000236;1.17e-08;13!CL:0000766;1.54e-08;69!CL:0000738;5.45e-08;136!CL:0000791;2.28e-07;18!CL:0000789;2.28e-07;18!CL:0002419;2.28e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.93e-39,168;CL:0000738,2.57e-36,136;CL:0002032,5.83e-36,161;CL:0000837,5.83e-36,161;CL:0000988,1.22e-34,177;CL:0002087,8.56e-30,115;CL:0002031,2.42e-29,120;CL:0000860,2.30e-20,42;CL:0002057,2.30e-20,42;CL:0000763,7.83e-20,108;CL:0000049,7.83e-20,108;CL:0000766,1.08e-16,72;CL:0000542,3.13e-15,53;CL:0000051,3.13e-15,53;CL:0000838,3.34e-15,52;CL:0000473,2.02e-14,48;CL:0000234,2.02e-14,48;CL:0002009,6.68e-14,61;CL:0000557,1.13e-13,67;CL:0000839,1.63e-13,66;CL:0002194,3.50e-13,59;CL:0000576,3.50e-13,59;CL:0000040,3.50e-13,59;CL:0000559,3.50e-13,59;CL:0000945,5.62e-10,24;CL:0000826,5.62e-10,24;CL:0000236,9.80e-09,14;CL:0000791,2.39e-07,18;CL:0000789,2.39e-07,18;CL:0002420,2.39e-07,18;CL:0002419,2.39e-07,18;CL:0000790,2.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.98e-15;42!CL:0000051;2.15e-09;53!CL:0000790;2.28e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-17!102;UBERON:0003061!2.69e-17!102;UBERON:0002193!2.46e-14!112;UBERON:0002371!1.26e-10!80;UBERON:0001474!3.68e-10!86;UBERON:0007023!1.46e-08!115;UBERON:0000178!2.76e-07!15;UBERON:0000179!2.76e-07!15;UBERON:0000463!2.76e-07!15;UBERON:0004765!3.77e-07!101;UBERON:0001434!3.77e-07!101;UBERON:0002405!7.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-07;15!UBERON:0000179;2.63e-07;15!UBERON:0000463;2.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-17,98;UBERON:0003061,1.05e-17,98;UBERON:0002193,1.30e-14,108;UBERON:0002371,6.32e-11,76;UBERON:0001474,2.05e-10,82;UBERON:0002405,8.39e-10,93;UBERON:0007023,2.39e-08,114;UBERON:0004765,6.96e-08,90;UBERON:0000178,2.76e-07,15;UBERON:0000179,2.76e-07,15;UBERON:0000463,2.76e-07,15 | |||
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| ||
|short_description=p1@UIMC1 | |||
}} | }} |
Latest revision as of 05:26, 17 September 2015
Short description: | p1@UIMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UIMC1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000323774, ENST00000377220, ENST00000507513, ENST00000510698, ENST00000511320, ENST00000512031, NM_001199297, NM_001199298, uc003mfc.1, uc003mfd.1, uc003mfg.1, uc003mfh.1, uc010jkj.1_5end |
EntrezGene: | UIMC1 |
HGNC: | 30298 |
UniProt: | F2Z2T8D6RDZ5D6RCF3D6RCQ3Q96RL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-17 | 98 |
blood island | 1.05e-17 | 98 |
hemolymphoid system | 1.30e-14 | 108 |
bone marrow | 6.32e-11 | 76 |
bone element | 2.05e-10 | 82 |
immune system | 8.39e-10 | 93 |
adult organism | 2.39e-08 | 114 |
skeletal element | 6.96e-08 | 90 |
blood | 2.76e-07 | 15 |
haemolymphatic fluid | 2.76e-07 | 15 |
organism substance | 2.76e-07 | 15 |