FFCP PHASE1:Hg19::chr5:321810..321877,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:321810..321877,+
|short_description=p1@AHRR
|description=CAGE_peak_1_at_AHRR_5end
|association_with_transcript=0bp_to_ENST00000514523_5end
|EntrezGene=574...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57491 | |EntrezGene=57491 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=346 | |HGNC=346 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHE0 | |UniProt=E5RHE0 | ||
|association_with_transcript=0bp_to_ENST00000514523_5end | |||
|cluster_id=chr5:321810..321877,+ | |||
|description=CAGE_peak_1_at_AHRR_5end | |||
|id=chr5:321810..321877,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.18e-31!180;CL:0000057!2.49e-20!75;CL:0002620!3.65e-12!23;CL:0000548!3.27e-11!679;CL:0000004!3.27e-11!679;CL:0000255!3.27e-11!679;CL:0000048!8.51e-11!430;CL:0000012!1.42e-10!682;CL:0002371!2.11e-10!591;CL:0000222!3.26e-10!119;CL:0000723!4.43e-10!436;CL:0000144!2.22e-09!625;CL:0000034!6.50e-09!444;CL:0000183!1.17e-08!59;CL:0000680!1.30e-08!57;CL:0000056!1.30e-08!57;CL:0000355!1.30e-08!57;CL:0000187!5.71e-08!54;CL:0000192!7.84e-07!42;CL:0000514!7.84e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.41e-13;23!CL:0000057;4.51e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.70e-21,76;CL:0000048,3.10e-15,427;CL:0000723,2.76e-14,433;CL:0002620,7.77e-13,23;CL:0000034,1.17e-12,441;CL:0000222,2.65e-10,121;CL:0000219,1.60e-09,386;CL:0002320,3.34e-09,361;CL:0000680,5.93e-09,58;CL:0000056,5.93e-09,58;CL:0000355,5.93e-09,58;CL:0000187,2.83e-08,55;CL:0000134,5.06e-08,354;CL:0000192,4.65e-07,43;CL:0000514,4.65e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.09e-14!167;UBERON:0000914!4.97e-12!83;UBERON:0002329!4.97e-12!83;UBERON:0003077!4.97e-12!83;UBERON:0003059!4.97e-12!83;UBERON:0007282!4.97e-12!83;UBERON:0009618!4.97e-12!83;UBERON:0007285!4.97e-12!83;UBERON:0002097!6.35e-11!40;UBERON:0004290!1.80e-10!70;UBERON:0002199!4.05e-10!45;UBERON:0002416!4.05e-10!45;UBERON:0000926!3.17e-08!448;UBERON:0004120!3.17e-08!448;UBERON:0006603!3.17e-08!448;UBERON:0003102!4.66e-08!95;UBERON:0000486!6.99e-08!82;UBERON:0001134!1.71e-07!61;UBERON:0002036!1.71e-07!61;UBERON:0003082!1.71e-07!61;UBERON:0002385!4.63e-07!63;UBERON:0001015!4.63e-07!63;UBERON:0000383!4.63e-07!63;UBERON:0001637!7.41e-07!42;UBERON:0003509!7.41e-07!42;UBERON:0004572!7.41e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.26e-09;41!UBERON:0002199;3.75e-07;46!UBERON:0002416;3.75e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.73e-15,167;UBERON:0002097,7.94e-12,41;UBERON:0007503,6.62e-11,78;UBERON:0002199,7.31e-11,46;UBERON:0002416,7.31e-11,46;UBERON:0007524,1.10e-10,73;UBERON:0002329,1.19e-10,71;UBERON:0003059,1.19e-10,71;UBERON:0007282,1.19e-10,71;UBERON:0004290,1.19e-10,71;UBERON:0009618,1.19e-10,71;UBERON:0003077,3.51e-10,72;UBERON:0007285,3.51e-10,72;UBERON:0002384,4.13e-10,371;UBERON:0000486,6.89e-08,83;UBERON:0001134,1.50e-07,62;UBERON:0002036,1.50e-07,62;UBERON:0003082,1.50e-07,62;UBERON:0001434,2.24e-07,100;UBERON:0001637,3.96e-07,42;UBERON:0003509,3.96e-07,42;UBERON:0004572,3.96e-07,42;UBERON:0003102,4.61e-07,99;UBERON:0000926,5.78e-07,315;UBERON:0004120,5.78e-07,315;UBERON:0006603,5.78e-07,315;UBERON:0002385,8.95e-07,64;UBERON:0001015,8.95e-07,64;UBERON:0000383,8.95e-07,64 | |||
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| ||
|short_description=p1@AHRR | |||
}} | }} |
Latest revision as of 15:22, 17 September 2015
Short description: | p1@AHRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AHRR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000514523_5end |
EntrezGene: | AHRR |
HGNC: | 346 |
UniProt: | E5RHE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.70e-21 | 76 |
multi fate stem cell | 3.10e-15 | 427 |
somatic stem cell | 2.76e-14 | 433 |
skin fibroblast | 7.77e-13 | 23 |
stem cell | 1.17e-12 | 441 |
mesodermal cell | 2.65e-10 | 121 |
motile cell | 1.60e-09 | 386 |
connective tissue cell | 3.34e-09 | 361 |
muscle precursor cell | 5.93e-09 | 58 |
myoblast | 5.93e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-09 | 58 |
muscle cell | 2.83e-08 | 55 |
mesenchymal cell | 5.06e-08 | 354 |
smooth muscle cell | 4.65e-07 | 43 |
smooth muscle myoblast | 4.65e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.73e-15 | 167 |
skin of body | 7.94e-12 | 41 |
epithelial vesicle | 6.62e-11 | 78 |
integument | 7.31e-11 | 46 |
integumental system | 7.31e-11 | 46 |
dense mesenchyme tissue | 1.10e-10 | 73 |
somite | 1.19e-10 | 71 |
presomitic mesoderm | 1.19e-10 | 71 |
presumptive segmental plate | 1.19e-10 | 71 |
dermomyotome | 1.19e-10 | 71 |
trunk paraxial mesoderm | 1.19e-10 | 71 |
paraxial mesoderm | 3.51e-10 | 72 |
presumptive paraxial mesoderm | 3.51e-10 | 72 |
connective tissue | 4.13e-10 | 371 |
multilaminar epithelium | 6.89e-08 | 83 |
skeletal muscle tissue | 1.50e-07 | 62 |
striated muscle tissue | 1.50e-07 | 62 |
myotome | 1.50e-07 | 62 |
skeletal system | 2.24e-07 | 100 |
artery | 3.96e-07 | 42 |
arterial blood vessel | 3.96e-07 | 42 |
arterial system | 3.96e-07 | 42 |
surface structure | 4.61e-07 | 99 |
mesoderm | 5.78e-07 | 315 |
mesoderm-derived structure | 5.78e-07 | 315 |
presumptive mesoderm | 5.78e-07 | 315 |
muscle tissue | 8.95e-07 | 64 |
musculature | 8.95e-07 | 64 |
musculature of body | 8.95e-07 | 64 |