FFCP PHASE1:Hg19::chr5:40798473..40798496,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:40798473..40798496,-
|short_description=p4@PRKAA1
|description=CAGE_peak_4_at_PRKAA1_5end
|association_with_transcript=0bp_to_ENST00000354209_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5562 | |EntrezGene=5562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9376 | |HGNC=9376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000354209_5end | |||
|cluster_id=chr5:40798473..40798496,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_PRKAA1_5end | |||
|id=chr5:40798473..40798496,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.14e-18!32;UBERON:0002619!4.77e-18!22;UBERON:0001950!4.53e-17!20;UBERON:0001893!7.75e-17!34;UBERON:0000956!1.36e-15!25;UBERON:0000203!1.36e-15!25;UBERON:0002791!2.29e-15!33;UBERON:0002020!8.09e-15!34;UBERON:0003528!8.09e-15!34;UBERON:0002780!2.38e-13!41;UBERON:0001890!2.38e-13!41;UBERON:0006240!2.38e-13!41;UBERON:0003080!6.04e-13!42;UBERON:0002616!1.73e-09!59;UBERON:0001872!2.46e-09!5;UBERON:0003056!5.34e-09!61;UBERON:0001049!1.35e-08!57;UBERON:0005068!1.35e-08!57;UBERON:0006241!1.35e-08!57;UBERON:0007135!1.35e-08!57;UBERON:0000955!2.15e-08!69;UBERON:0006238!2.15e-08!69;UBERON:0001017!2.47e-08!82;UBERON:0005743!9.65e-08!86;UBERON:0000073!2.01e-07!94;UBERON:0001016!2.01e-07!94;UBERON:0003075!7.16e-07!86;UBERON:0007284!7.16e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0002021;3.35e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0002021,3.22e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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|short_description=p4@PRKAA1 | |||
}} | }} |
Latest revision as of 22:12, 17 September 2015
Short description: | p4@PRKAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKAA1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000354209_5end |
EntrezGene: | PRKAA1 |
HGNC: | 9376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
occipital lobe | 3.22e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |