FFCP PHASE1:Hg19::chr5:68788594..68788656,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:68788594..68788656,+
|short_description=p1@OCLN
|description=CAGE_peak_1_at_OCLN_5end
|association_with_transcript=0bp_to_ENST00000380766,ENST00000396442,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100506658 | |EntrezGene=100506658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8104 | |HGNC=8104 | ||
|TSSclassifier=strong | |||
|UniProt=Q5U1V4,Q16625 | |UniProt=Q5U1V4,Q16625 | ||
|association_with_transcript=0bp_to_ENST00000380766,ENST00000396442,uc003jwv.3_5end | |||
|cluster_id=chr5:68788594..68788656,+ | |||
|description=CAGE_peak_1_at_OCLN_5end | |||
|id=chr5:68788594..68788656,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.94e-27!254;CL:0000223!4.87e-12!59;CL:0002076!2.99e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.72e-25,253;CL:0000223,2.53e-12,58;CL:0002076,2.79e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.08e-12;30!CL:0000223;7.64e-08;58!UBERON:0006595;2.02e-07;86 | |||
|ontology_enrichment_disease=DOID:0050687!4.67e-27!143;DOID:305!1.67e-26!106;DOID:162!1.18e-16!235;DOID:14566!3.43e-16!239;DOID:299!1.13e-11!25;DOID:7!2.77e-08!39;DOID:1749!7.98e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;9.67e-13;25!DOID:305;4.00e-09;106!DOID:1749;2.24e-07;14!DOID:0050687;9.02e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.61e-28,106;DOID:0050687,7.56e-28,143;DOID:162,2.45e-18,235;DOID:14566,4.15e-18,239;DOID:299,7.83e-13,25;DOID:7,4.81e-08,39;DOID:1749,1.97e-07,14;DOID:0050686,5.35e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0005177!6.48e-18!107;UBERON:0004119!1.06e-16!169;UBERON:0000925!1.06e-16!169;UBERON:0006595!1.06e-16!169;UBERON:0001007!4.11e-16!155;UBERON:0001555!4.11e-16!155;UBERON:0007026!4.11e-16!155;UBERON:0004921!2.30e-15!129;UBERON:0004185!2.30e-15!129;UBERON:0000466!2.47e-15!126;UBERON:0000077!7.73e-13!130;UBERON:0000481!3.82e-12!347;UBERON:0005911!6.07e-12!82;UBERON:0000062!9.03e-12!511;UBERON:0000464!2.65e-11!104;UBERON:0005409!5.97e-11!35;UBERON:0001041!1.10e-10!98;UBERON:0005172!1.68e-10!55;UBERON:0005173!1.68e-10!55;UBERON:0007023!2.15e-10!115;UBERON:0000064!7.06e-10!219;UBERON:0009569!1.27e-09!113;UBERON:0004111!5.58e-09!241;UBERON:0005743!6.20e-09!86;UBERON:0000475!6.35e-09!365;UBERON:0000073!7.42e-09!94;UBERON:0001016!7.42e-09!94;UBERON:0000160!7.76e-09!27;UBERON:0000468!1.33e-08!659;UBERON:0000922!1.90e-08!612;UBERON:0000949!2.75e-08!45;UBERON:0000924!3.36e-08!173;UBERON:0006601!3.36e-08!173;UBERON:0001017!4.53e-08!82;UBERON:0002346!4.73e-08!90;UBERON:0002417!6.25e-08!61;UBERON:0000916!6.25e-08!61;UBERON:0000033!1.25e-07!123;UBERON:0004121!1.41e-07!169;UBERON:0000153!1.90e-07!129;UBERON:0007811!1.90e-07!129;UBERON:0003075!2.42e-07!86;UBERON:0007284!2.42e-07!86;UBERON:0002108!2.44e-07!14;UBERON:0002553!2.63e-07!70;UBERON:0001048!2.66e-07!168;UBERON:0001049!4.19e-07!57;UBERON:0005068!4.19e-07!57;UBERON:0006241!4.19e-07!57;UBERON:0007135!4.19e-07!57;UBERON:0000955!5.11e-07!69;UBERON:0006238!5.11e-07!69;UBERON:0002048!6.50e-07!22;UBERON:0000117!6.50e-07!22;UBERON:0000171!6.50e-07!22;UBERON:0000170!6.50e-07!22;UBERON:0005597!6.50e-07!22;UBERON:0000118!6.50e-07!22;UBERON:0000477!7.09e-07!286;UBERON:0000483!7.15e-07!309;UBERON:0003929!7.16e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.17e-08;49!UBERON:0005409;9.97e-08;22!UBERON:0002048;4.05e-07;22!UBERON:0000117;4.05e-07;22!UBERON:0000171;4.05e-07;22!UBERON:0000170;4.05e-07;22!UBERON:0004921;4.26e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.18e-18,101;UBERON:0011216,2.78e-14,223;UBERON:0004921,2.65e-11,118;UBERON:0004119,3.90e-11,160;UBERON:0000925,3.90e-11,160;UBERON:0006595,3.90e-11,160;UBERON:0001007,5.69e-11,145;UBERON:0001555,5.69e-11,145;UBERON:0007026,5.69e-11,145;UBERON:0005911,8.16e-11,82;UBERON:0007023,3.90e-10,114;UBERON:0005172,4.71e-10,54;UBERON:0005173,4.71e-10,54;UBERON:0009569,1.02e-09,112;UBERON:0000949,1.60e-08,45;UBERON:0004111,1.46e-07,240;UBERON:0002417,1.65e-07,60;UBERON:0000916,1.65e-07,60;UBERON:0001041,1.83e-07,87;UBERON:0002048,3.58e-07,22;UBERON:0000117,3.58e-07,22;UBERON:0000171,3.58e-07,22;UBERON:0000170,3.58e-07,22;UBERON:0005597,3.58e-07,22;UBERON:0000118,3.58e-07,22;UBERON:0005409,5.64e-07,25;UBERON:0000489,7.22e-07,31 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,8.60068777755281,9.76921635161399,0.873765488520689,0.791300934685361,0,0.662794751455832,0.672325146451775,0,0,0,0.984968464614303,1.63200552995402,0.626909442956176,2.28988789704845,0.684372125364421,0.87879847716362,0.229240217243854,0.57470412614962,0.550975469195755,0,0,0.154816123316076,0,0.6024118375565,11.8321283253372,0,0,9.68881449804996,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,5.60508562981536,6.847986204152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,5.19941494402373,3.1042115644759,3.86473057049755,17.6821751921912,3.27865759463288,5.19098219898201,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0.371457501329565,5.16782259153433,0.860234595106124,2.77712401286075,5.08777147731609,2.93649605346934,2.47606237746061,2.29894463190492,1.55050055501597,1.06729878806013,4.35136796594071,2.01414658554573,0,0.732186172644509,2.20597848207521,0,7.85837608899902,5.38870494302808,6.53146586803269,0,1.89853131913626,1.64881569537367,0,0,1.3082821564276,4.47274756525787,0,0.264818361626438,0,0,1.12135520028461,0,0.49333509683432,0.311211035399766,2.2900814251847,0.326923806226917,0.454072282934794,0.576175924479999,5.85803579584492,1.87296046098192,0.570471821544449,1.04614076386261,1.64408298101271,1.29498355494505,0.280901613404497,0.61246251376468,0.122834317311768,0.826606249406124,0,0.247266929278557,0,0,0.673344455816265,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0.89694817844431,1.06778694409284,0.211931901159562,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0,0.368199594569197,0,1.06502877754984,0.302256294682921,0.339121184620975,6.3776081543888,3.00020732649918,6.30970109855808,37.689875194045,42.1444663262323,34.1610192036384,29.7507227894113,34.8202774208367,33.9428943940522,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,2.95262181849859,0,0.8231480226628,0,64.6450677591337,51.1070152672366,39.5829237476541,0,100.72753116681,3.60292401626904,1.86575485194663,4.49607013030478,1.50793458617446,1.38882667737794,4.88712457965487,0,0,4.86907700895323,0.939269553886573,1.29929802984966,0.462985512576611,1.71228737011138,30.0277671224525,24.8960987007513,0,0,0,3.74935335947108,1.51183915378974,3.1190521393325,0.268675568108545,2.03443756959773,1.53353071666084,0,0,0.207328115540772,0.288239906833923,0.50496973370552,0,0,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0.224262168690721,1.30788020649984,0.1466765716419,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,3.31583314765545,0,3.69900067373611,0,0,0,3.83399768786532,3.44585807502342,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0.773288812777695,0,0.637938751653163,1.49801404789436,0,0,0.36807447515742,0,0.813795071099207,0,0.178428988797162,0.630809660135739,0.702848489956279,0,0,0,0,0.553107505625109,2.08520674723399,0.195801157462741,0,0,0,0,2.12189300012382,1.66435439510497,0.30239029332968,0,0.306923946576125,0.280660094433074,0.640695746278505,0,0.160853921143607,0,0,0,0.492762936082855,0,0.116210378459959,88.8316954498423,0.601519410909855,33.6095609616022,0,0.182091168006717,0.655622074797121,10.3775910968705,20.794141018192,5.49044838423799,8.76835347919564,21.1103257785751,0,0.340187410553031,1.51141141271498,3.08454505380579,2.16757150035082,2.00675909541941,23.1937408470985,24.101204258933,5.1491193586101,0.438519753291869,0,7.1806035032589,4.92021968549559,15.6181629438865,31.1183855176121,11.720891496748,13.6965769868176,0,0.650060246036521,0,0.290012154876366,2.00263202249038,0.614014698904518,0.275673144969061,0.644521469209642,0.145016693914229,0.170453254832202,0,9.58652509093673,4.03599141466723,1.53135254993501,35.7086966420091,0,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.571890581771475,0.255897791311334,2.1396949401696,0,0,0,0,0.471249609382746,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,1.31178950409327,0.405820753925408,0,0,0,0.491245205065606,0,0.354761064070598,0.633322905892992,3.95153871551882,0,0,3.07910760721639,1.34060455107157,0,31.0674542563371,0.86101074534246,0,0.443430153536676,2.29723400206959,0,0,0.569647187174163,0,0,0,0,0,5.12755541411871,38.4991942105343,9.80160863924127,0,0,0,7.49303481825465,0,0,0,1.29848776109822,30.3260952362535,0,0,55.1395849598148,0,0,2.42159648629257,16.1821570322324,0,7.06653757909453,6.26293102098765,5.50602167649298,5.27547857585509,0,1.23087398947712,0.811367035427949,0,0,40.6094972685837,0.879049075631364,26.4565937413939,0,13.9226711935142,28.6493381685228,10.0967991483097,9.82914246717543,5.96488588659779,2.53204949538923,2.78271762557265,0,26.6018014241272,4.9811997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| ||
|short_description=p1@OCLN | |||
}} | }} |
Latest revision as of 13:16, 18 September 2015
Short description: | p1@OCLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OCLN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380766, ENST00000396442, uc003jwv.3_5end |
EntrezGene: | OCLN |
HGNC: | 8104 |
UniProt: | Q5U1V4Q16625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.72e-25 | 253 |
endodermal cell | 2.53e-12 | 58 |
endo-epithelial cell | 2.79e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.18e-18 | 101 |
organ system subdivision | 2.78e-14 | 223 |
subdivision of digestive tract | 2.65e-11 | 118 |
endoderm-derived structure | 3.90e-11 | 160 |
endoderm | 3.90e-11 | 160 |
presumptive endoderm | 3.90e-11 | 160 |
digestive system | 5.69e-11 | 145 |
digestive tract | 5.69e-11 | 145 |
primitive gut | 5.69e-11 | 145 |
endo-epithelium | 8.16e-11 | 82 |
adult organism | 3.90e-10 | 114 |
abdomen element | 4.71e-10 | 54 |
abdominal segment element | 4.71e-10 | 54 |
subdivision of trunk | 1.02e-09 | 112 |
endocrine system | 1.60e-08 | 45 |
anatomical conduit | 1.46e-07 | 240 |
abdominal segment of trunk | 1.65e-07 | 60 |
abdomen | 1.65e-07 | 60 |
foregut | 1.83e-07 | 87 |
lung | 3.58e-07 | 22 |
respiratory tube | 3.58e-07 | 22 |
respiration organ | 3.58e-07 | 22 |
pair of lungs | 3.58e-07 | 22 |
lung primordium | 3.58e-07 | 22 |
lung bud | 3.58e-07 | 22 |
gastrointestinal system | 5.64e-07 | 25 |
cavitated compound organ | 7.22e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.61e-28 | 106 |
cell type cancer | 7.56e-28 | 143 |
cancer | 2.45e-18 | 235 |
disease of cellular proliferation | 4.15e-18 | 239 |
adenocarcinoma | 7.83e-13 | 25 |
disease of anatomical entity | 4.81e-08 | 39 |
squamous cell carcinoma | 1.97e-07 | 14 |
organ system cancer | 5.35e-07 | 137 |