FFCP PHASE1:Hg19::chr5:96294118..96294125,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:96294118..96294125,+
|short_description=p21@LNPEP
|description=CAGE_peak_21_at_LNPEP_5end
|association_with_transcript=-29bp_to_ENST00000395770_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4012 | |EntrezGene=4012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6656 | |HGNC=6656 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000395770_5end | |||
|cluster_id=chr5:96294118..96294125,+ | |||
|description=CAGE_peak_21_at_LNPEP_5end | |||
|id=chr5:96294118..96294125,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.15e-13!119;CL:0000875!6.48e-13!3;CL:0002396!6.48e-13!3;CL:0002031!1.97e-11!124;CL:0000738!1.46e-10!140;CL:0000815!1.48e-09!2;CL:0000792!1.48e-09!2;CL:0002677!1.48e-09!2;CL:0000037!2.19e-09!172;CL:0000566!2.19e-09!172;CL:0002032!4.31e-09!165;CL:0000837!4.31e-09!165;CL:0000988!1.49e-08!182;CL:0002393!2.44e-07!9;CL:0002397!2.44e-07!9;CL:0000838!3.13e-07!52;CL:0000542!4.70e-07!53;CL:0000051!4.70e-07!53;CL:0000136!8.34e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002127;5.12e-50;1!CL:0000911;5.12e-50;1!CL:0000814;5.12e-50;1!CL:0000136;2.43e-16;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.58e-50,1;CL:0000914,6.58e-50,1;CL:0000911,6.58e-50,1;CL:0000814,6.58e-50,1;CL:0002042,6.58e-50,1;CL:0002039,6.58e-50,1;CL:0002040,6.58e-50,1;CL:0002041,6.58e-50,1;CL:0000893,9.18e-26,2;CL:0002489,9.18e-26,2;CL:0000809,9.18e-26,2;CL:0000808,9.18e-26,2;CL:0000894,9.18e-26,2;CL:0000806,9.18e-26,2;CL:0000807,9.18e-26,2;CL:0000805,9.18e-26,2;CL:0002425,9.18e-26,2;CL:0000136,2.58e-14,15 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.12e-50;1!CL:0002425;8.10e-26;2!UBERON:0004872;2.26e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.36e-08!112;UBERON:0002390!3.45e-07!102;UBERON:0003061!3.45e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.21e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.13e-13,4;UBERON:0004340,1.13e-13,4;UBERON:0002370,1.29e-13,4;UBERON:0005058,1.29e-13,4;UBERON:0009113,1.29e-13,4;UBERON:0003295,1.29e-13,4;UBERON:0005562,1.29e-13,4;UBERON:0003351,1.57e-09,6;UBERON:0003124,2.18e-08,7;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000077,7.40e-08,29 | |||
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| ||
|short_description=p21@LNPEP | |||
}} | }} |
Latest revision as of 09:49, 19 September 2015
Short description: | p21@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000395770_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.58e-50 | 1 |
immature NK T cell | 6.58e-50 | 1 |
effector T cell | 6.58e-50 | 1 |
mature NK T cell | 6.58e-50 | 1 |
immature NK T cell stage IV | 6.58e-50 | 1 |
immature NK T cell stage I | 6.58e-50 | 1 |
immature NK T cell stage II | 6.58e-50 | 1 |
immature NK T cell stage III | 6.58e-50 | 1 |
thymocyte | 9.18e-26 | 2 |
double negative thymocyte | 9.18e-26 | 2 |
double-positive, alpha-beta thymocyte | 9.18e-26 | 2 |
DN4 thymocyte | 9.18e-26 | 2 |
DN1 thymic pro-T cell | 9.18e-26 | 2 |
DN2 thymocyte | 9.18e-26 | 2 |
DN3 thymocyte | 9.18e-26 | 2 |
immature single positive thymocyte | 9.18e-26 | 2 |
early T lineage precursor | 9.18e-26 | 2 |
fat cell | 2.58e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.13e-13 | 4 |
allantois | 1.13e-13 | 4 |
thymus | 1.29e-13 | 4 |
hemolymphoid system gland | 1.29e-13 | 4 |
thymic region | 1.29e-13 | 4 |
pharyngeal gland | 1.29e-13 | 4 |
thymus primordium | 1.29e-13 | 4 |
pharyngeal epithelium | 1.57e-09 | 6 |
chorion | 2.18e-08 | 7 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
mixed endoderm/mesoderm-derived structure | 7.40e-08 | 29 |