FFCP PHASE1:Hg19::chr1:2359111..2359148,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:2359111..2359148,+ | |||
|coexpression_cluster_id=C564 | |coexpression_cluster_id=C564 | ||
|description=CAGE_peak_at_chr1:2359111..2359148,+ | |description=CAGE_peak_at_chr1:2359111..2359148,+ |
Latest revision as of 05:21, 28 July 2015
Short description: | p@chr1:2359111..2359148, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2359111..2359148, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr1:2359111..2359148+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.34e-41 | 14 |
respiratory epithelial cell | 1.89e-36 | 13 |
endo-epithelial cell | 5.57e-29 | 42 |
epithelial cell of tracheobronchial tree | 3.74e-24 | 9 |
epithelial cell of lower respiratory tract | 3.74e-24 | 9 |
transitional epithelial cell | 5.68e-24 | 4 |
urothelial cell | 5.68e-24 | 4 |
ecto-epithelial cell | 1.05e-22 | 34 |
endodermal cell | 4.03e-20 | 58 |
duct epithelial cell | 2.40e-19 | 3 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
---|---|---|
urothelium | 3.17e-19 | 5 |
lower respiratory tract epithelium | 6.34e-19 | 3 |
epithelium of bronchus | 6.34e-19 | 3 |
gingival epithelium | 1.47e-18 | 3 |
transitional epithelium | 4.69e-16 | 6 |
tracheobronchial tree | 2.83e-14 | 15 |
lower respiratory tract | 2.83e-14 | 15 |
skin epidermis | 5.17e-14 | 15 |
outer epithelium | 5.17e-14 | 15 |
enveloping layer of ectoderm | 5.17e-14 | 15 |
Showing 1 to 10 of 49 entries