FFCP PHASE1:Hg19::chr1:165873233..165873247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=7371 | |EntrezGene=7371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=12562 | |HGNC=12562 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000475333_5end | |association_with_transcript=-55bp_to_ENST00000475333_5end | ||
|cluster_id=chr1:165873233..165873247,+ | |||
|coexpression_cluster_id=C1109 | |coexpression_cluster_id=C1109 | ||
|description=CAGE_peak_6_at_UCK2_5end | |description=CAGE_peak_6_at_UCK2_5end |
Latest revision as of 10:22, 18 September 2015
Short description: | p6@UCK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UCK2_5end |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | -55bp_to_ENST00000475333_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@UCK2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.45e-27 | 13 |
transitional epithelial cell | 1.15e-24 | 4 |
urothelial cell | 1.15e-24 | 4 |
endo-epithelial cell | 3.21e-24 | 42 |
epithelial cell of Malassez | 7.24e-19 | 3 |
gingival epithelial cell | 1.56e-18 | 3 |
endodermal cell | 9.77e-17 | 58 |
general ecto-epithelial cell | 1.12e-14 | 14 |
mammary gland epithelial cell | 4.41e-13 | 4 |
sebum secreting cell | 9.00e-13 | 2 |
Showing 1 to 10 of 27 entries
Ontology term | p-value | n |
---|---|---|
urothelium | 8.99e-20 | 5 |
gingival epithelium | 1.56e-18 | 3 |
transitional epithelium | 1.67e-16 | 6 |
jaw skeleton | 2.77e-14 | 4 |
splanchnocranium | 2.77e-14 | 4 |
mammary gland | 4.41e-13 | 4 |
mammary bud | 4.41e-13 | 4 |
mammary ridge | 4.41e-13 | 4 |
mammary placode | 4.41e-13 | 4 |
skin gland | 9.00e-13 | 2 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.62e-12 | 2 |
epithelioid sarcoma | 5.45e-07 | 1 |
liver cancer | 7.73e-07 | 1 |
Showing 1 to 3 of 3 entries