FFCP PHASE1:Hg19::chr3:196911095..196911116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=1739 | |EntrezGene=1739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2900 | |HGNC=2900 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PG21,B4DF78,B4DGU1,B4DGZ8,E7EWL7,Q12959 | |UniProt=E9PG21,B4DF78,B4DGU1,B4DGZ8,E7EWL7,Q12959 | ||
|association_with_transcript=-93bp_to_ENST00000452595,NM_001204387,NM_001204388,uc010ian.2,uc011bub.1,uc011buc.1_5end | |association_with_transcript=-93bp_to_ENST00000452595,NM_001204387,NM_001204388,uc010ian.2,uc011bub.1,uc011buc.1_5end | ||
|cluster_id=chr3:196911095..196911116,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_20_at_DLG1_5end | |description=CAGE_peak_20_at_DLG1_5end | ||
Latest revision as of 16:42, 17 September 2015
| Short description: | p20@DLG1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_20_at_DLG1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -93bp_to_ENST00000452595, NM_001204387, NM_001204388, uc010ian.2, uc011bub.1, uc011buc.1_5end |
| EntrezGene: | DLG1 |
| HGNC: | 2900 |
| UniProt: | E9PG21B4DF78B4DGU1B4DGZ8E7EWL7Q12959 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p20@DLG1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 1.45e-107 | 20 |
| regional part of cerebral cortex | 5.67e-98 | 22 |
| cerebral cortex | 2.39e-86 | 25 |
| pallium | 2.39e-86 | 25 |
| cerebral hemisphere | 1.83e-84 | 32 |
| telencephalon | 1.84e-79 | 34 |
| brain grey matter | 3.41e-79 | 34 |
| gray matter | 3.41e-79 | 34 |
| regional part of telencephalon | 1.35e-75 | 32 |
| regional part of forebrain | 1.05e-65 | 41 |
Showing 1 to 10 of 66 entries
