FFCP PHASE1:Hg19::chr10:11222326..11222339,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:11222326..11222339,- | |||
|coexpression_cluster_id=C520 | |||
|description=CAGE_peak_at_chr10:11222326..11222339,- | |||
|id=chr10:11222326..11222339,- | |||
|ontology_enrichment_celltype=CL:0000037!2.77e-75!172;CL:0000566!2.77e-75!172;CL:0000988!1.05e-69!182;CL:0002032!1.76e-69!165;CL:0000837!1.76e-69!165;CL:0000738!1.59e-68!140;CL:0002031!2.31e-62!124;CL:0002087!1.06e-59!119;CL:0000766!1.32e-59!76;CL:0000763!6.69e-59!112;CL:0000049!6.69e-59!112;CL:0000557!2.22e-56!71;CL:0000839!3.64e-55!70;CL:0002057!4.79e-54!42;CL:0002009!6.56e-50!65;CL:0002194!1.01e-49!63;CL:0000576!1.01e-49!63;CL:0000040!1.01e-49!63;CL:0000559!1.01e-49!63;CL:0000860!1.44e-49!45;CL:0000134!2.33e-23!358;CL:0002320!2.04e-22!365;CL:0000219!4.23e-19!390;CL:0000048!8.02e-16!430;CL:0002393!1.03e-15!9;CL:0002397!1.03e-15!9;CL:0000723!2.96e-15!436;CL:0000034!3.39e-15!444;CL:0000624!6.36e-11!6;CL:0000838!1.15e-10!52;CL:0000542!2.37e-10!53;CL:0000051!2.37e-10!53;CL:0002274!2.83e-09!5;CL:0000457!2.83e-09!5;CL:0002191!2.83e-09!5;CL:0000097!2.83e-09!5;CL:0000831!2.83e-09!5;CL:0002028!2.83e-09!5;CL:0000084!8.14e-08!25;CL:0000827!8.14e-08!25;CL:0000623!3.35e-07!3;CL:0000825!3.35e-07!3;CL:0000791!4.97e-07!18;CL:0000789!4.97e-07!18;CL:0002420!4.97e-07!18;CL:0002419!4.97e-07!18;CL:0000790!4.97e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.76e-32;33!CL:0002057;4.76e-32;33!CL:0000576;1.01e-25;48!CL:0000473;4.76e-25;39!CL:0000234;4.76e-25;39!CL:0000766;8.08e-25;69!CL:0002393;8.36e-16;6!CL:0002397;8.36e-16;6!CL:0000623;2.88e-13;3!CL:0002087;3.73e-13;104!CL:0000767;4.14e-12;3!CL:0000097;8.64e-12;5!CL:0000738;1.01e-10;136!CL:0000624;1.43e-10;6!CL:0000791;8.06e-10;18!CL:0000789;8.06e-10;18!CL:0002419;8.06e-10;18!CL:0000763;1.32e-09;100!CL:0000988;3.76e-08;177!CL:0000094;8.92e-08;8!CL:0000084;8.81e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.30e-54,136;CL:0000766,7.14e-52,72;CL:0000860,1.01e-50,42;CL:0002057,1.01e-50,42;CL:0000473,3.07e-47,48;CL:0000234,3.07e-47,48;CL:0000037,1.96e-46,168;CL:0002031,2.18e-46,120;CL:0002087,8.01e-44,115;CL:0000988,1.46e-43,177;CL:0000839,1.95e-43,66;CL:0000557,1.10e-42,67;CL:0002032,2.88e-42,161;CL:0000837,2.88e-42,161;CL:0002194,1.88e-36,59;CL:0000576,1.88e-36,59;CL:0000040,1.88e-36,59;CL:0000559,1.88e-36,59;CL:0002009,4.62e-35,61;CL:0000763,3.59e-34,108;CL:0000049,3.59e-34,108;CL:0002393,1.51e-19,9;CL:0002397,1.51e-19,9;CL:0000134,1.32e-16,354;CL:0002320,4.43e-16,361;CL:0000219,3.18e-14,386;CL:0000623,2.88e-13,3;CL:0000825,2.88e-13,3;CL:0000767,3.12e-12,3;CL:0000034,5.06e-12,441;CL:0000048,5.92e-12,427;CL:0000097,9.44e-12,5;CL:0002028,9.44e-12,5;CL:0000723,1.22e-11,433;CL:0000624,1.62e-10,6;CL:0000791,8.47e-10,18;CL:0000789,8.47e-10,18;CL:0002420,8.47e-10,18;CL:0002419,8.47e-10,18;CL:0000790,8.47e-10,18;CL:0000838,3.19e-08,52;CL:0000542,5.07e-08,53;CL:0000051,5.07e-08,53;CL:0000094,7.59e-08,8;CL:0000084,9.11e-07,25;CL:0000827,9.11e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;5.98e-36;42!CL:0000049;5.64e-10;108!CL:0000790;8.06e-10;18 | |||
|ontology_enrichment_disease=DOID:8692!2.08e-09!31;DOID:1240!8.95e-09!39;DOID:2531!2.58e-08!51;DOID:0060083!2.58e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.62e-50!80;UBERON:0002390!6.00e-50!102;UBERON:0003061!6.00e-50!102;UBERON:0001474!7.93e-46!86;UBERON:0002193!2.35e-45!112;UBERON:0004765!4.38e-38!101;UBERON:0001434!4.38e-38!101;UBERON:0002405!6.89e-37!115;UBERON:0002384!3.95e-21!375;UBERON:0002204!1.54e-17!167;UBERON:0003081!6.57e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-39,76;UBERON:0001474,3.45e-36,82;UBERON:0002390,8.75e-36,98;UBERON:0003061,8.75e-36,98;UBERON:0002405,2.77e-33,93;UBERON:0004765,2.51e-32,90;UBERON:0002193,9.72e-32,108;UBERON:0001434,2.31e-28,100;UBERON:0002384,2.32e-15,371;UBERON:0002204,4.86e-14,167;UBERON:0003081,3.65e-13,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.393553906568396,5.50709987588466,1.91914699048606,6.03782880932696,0,0,0,0,0,2.64240395401362,4.9859586767869,7.82123345133553,4.99125002646459,0.223915474239924,0,0,0.290796477559129,0.755751887377619,0,1.39457422143411,2.05583944010913,1.23882548358041,3.45230870786581,5.89169625016932,10.4052181150977,1.03423704220986,2.5819387343353,2.70852973188684,0.376484679085209,0.272906150057846,2.02251136000576,12.2433556948361,9.30694178520671,8.95071976118658,0.989553900560148,5.78444607102732,8.09827026012119,0,0,0.622822248995575,3.01498398308092,5.21482918420201,13.031330682307,0,0.736555271975129,0.316462387440884,0.633765858935825,2.12604299965044,1.25795187305026,0.898629049171961,0.450530678524519,0.16072558669708,1.42506371870624,1.19350006319454,0.730656615058536,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,1.12101712596307,0,3.14735632182133,7.07419372948497,10.6912779479745,0,0.651844533267181,1.4203434172042,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.889719378972363,0.267540828089713,0,0,1.14966148080576,1.71813722741315,1.01207876807801,0,0,0,0,0,0,0,0,10.8867641341356,6.95344509037119,7.24122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,1.47798971368783,1.05658120815871,3.31724984865235,1.15295962733569,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,11.6248148519137,14.0157923658686,11.9359023740166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.432807638929335,0,0,1.99579371432817,0,0.635020748171649,0.649243880549111,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0.403599414382095,0,0,0.921722292925374,0.894704431569664,0.834245708559542,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:11222326..11222339,- | |||
}} |
Latest revision as of 10:23, 23 July 2015
Short description: | p@chr10:11222326..11222339, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11222326..11222339, - |
Coexpression cluster: | C520_Natural_CD14_CD8_Basophils_CD4_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-39 | 76 |
bone element | 3.45e-36 | 82 |
hematopoietic system | 8.75e-36 | 98 |
blood island | 8.75e-36 | 98 |
immune system | 2.77e-33 | 93 |
skeletal element | 2.51e-32 | 90 |
hemolymphoid system | 9.72e-32 | 108 |
skeletal system | 2.31e-28 | 100 |
connective tissue | 2.32e-15 | 371 |
musculoskeletal system | 4.86e-14 | 167 |
lateral plate mesoderm | 3.65e-13 | 203 |