FFCP PHASE1:Hg19::chr10:112679353..112679382,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8036 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15454 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000489390_5end | |||
|cluster_id=chr10:112679353..112679382,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_SHOC2_5end | |||
|id=chr10:112679353..112679382,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.80e-44!140;CL:0002031!6.18e-37!124;CL:0000037!8.29e-35!172;CL:0000566!8.29e-35!172;CL:0002087!1.82e-33!119;CL:0002032!1.86e-33!165;CL:0000837!1.86e-33!165;CL:0000988!5.25e-31!182;CL:0000766!1.52e-30!76;CL:0000557!3.12e-27!71;CL:0000839!7.02e-26!70;CL:0002009!1.94e-23!65;CL:0000860!9.74e-23!45;CL:0002057!1.24e-22!42;CL:0002194!1.59e-22!63;CL:0000576!1.59e-22!63;CL:0000040!1.59e-22!63;CL:0000559!1.59e-22!63;CL:0000763!1.28e-21!112;CL:0000049!1.28e-21!112;CL:0000134!2.79e-19!358;CL:0002320!8.53e-18!365;CL:0000219!4.33e-14!390;CL:0000048!4.40e-11!430;CL:0000542!7.39e-11!53;CL:0000051!7.39e-11!53;CL:0000838!1.92e-10!52;CL:0000034!2.66e-10!444;CL:0000723!4.18e-10!436;CL:0000945!7.23e-10!24;CL:0000826!7.23e-10!24;CL:0000236!2.23e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.11e-18;33!CL:0002057;6.11e-18;33!CL:0000576;2.14e-15;48!CL:0000473;1.13e-14;39!CL:0000234;1.13e-14;39!CL:0000766;2.49e-13;69!CL:0002087;2.99e-11;104!CL:0000945;8.94e-10;24!CL:0000738;9.32e-10;136!CL:0000236;2.32e-07;13!CL:0000542;6.17e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.21e-44,136;CL:0002031,1.71e-36,120;CL:0000037,3.29e-34,168;CL:0002087,5.09e-33,115;CL:0002032,7.15e-33,161;CL:0000837,7.15e-33,161;CL:0000988,3.27e-31,177;CL:0000766,2.34e-30,72;CL:0000557,5.00e-27,67;CL:0000839,1.18e-25,66;CL:0002009,3.28e-23,61;CL:0000860,1.24e-22,42;CL:0002057,1.24e-22,42;CL:0002194,2.69e-22,59;CL:0000576,2.69e-22,59;CL:0000040,2.69e-22,59;CL:0000559,2.69e-22,59;CL:0000473,3.84e-22,48;CL:0000234,3.84e-22,48;CL:0000763,3.94e-21,108;CL:0000049,3.94e-21,108;CL:0000134,3.05e-19,354;CL:0002320,9.50e-18,361;CL:0000219,5.12e-14,386;CL:0000048,4.18e-11,427;CL:0000542,7.38e-11,53;CL:0000051,7.38e-11,53;CL:0000838,1.91e-10,52;CL:0000034,2.56e-10,441;CL:0000723,4.00e-10,433;CL:0000945,7.22e-10,24;CL:0000826,7.22e-10,24;CL:0000236,2.23e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-16;42!CL:0000051;6.17e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-29!102;UBERON:0003061!1.12e-29!102;UBERON:0002193!2.59e-26!112;UBERON:0002371!1.60e-24!80;UBERON:0001474!1.26e-21!86;UBERON:0004765!1.30e-20!101;UBERON:0001434!1.30e-20!101;UBERON:0002384!4.26e-17!375;UBERON:0002405!2.47e-16!115;UBERON:0002204!5.19e-08!167;UBERON:0007023!6.77e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.71e-29,98;UBERON:0003061,2.71e-29,98;UBERON:0002193,7.36e-26,108;UBERON:0002371,3.32e-24,76;UBERON:0002405,8.20e-22,93;UBERON:0001474,3.11e-21,82;UBERON:0001434,2.72e-19,100;UBERON:0004765,5.77e-19,90;UBERON:0002384,4.82e-17,371;UBERON:0002204,2.07e-07,167;UBERON:0007023,9.78e-07,114 | |||
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| |||
|short_description=p1@SHOC2 | |||
}} |
Latest revision as of 09:34, 16 September 2015
Short description: | p1@SHOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHOC2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000489390_5end |
EntrezGene: | SHOC2 |
HGNC: | 15454 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.71e-29 | 98 |
blood island | 2.71e-29 | 98 |
hemolymphoid system | 7.36e-26 | 108 |
bone marrow | 3.32e-24 | 76 |
immune system | 8.20e-22 | 93 |
bone element | 3.11e-21 | 82 |
skeletal system | 2.72e-19 | 100 |
skeletal element | 5.77e-19 | 90 |
connective tissue | 4.82e-17 | 371 |
musculoskeletal system | 2.07e-07 | 167 |
adult organism | 9.78e-07 | 114 |