FFCP PHASE1:Hg19::chr10:60933351..60933363,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:60933351..60933363,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr10:60933351..60933363,+ | |||
|id=chr10:60933351..60933363,+ | |||
|ontology_enrichment_celltype=CL:0002231!1.87e-15!3;CL:0000223!2.93e-15!59;CL:0002076!8.94e-14!43;CL:0000080!1.99e-08!6;CL:0002166!8.24e-08!3;CL:0002621!2.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.29e-13;2!CL:0002166;1.60e-09;3!CL:0002231;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.21e-13,2;CL:0002166,1.41e-09,3;CL:0002231,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.61e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;8.64e-26;1!DOID:0060061;8.64e-26;1!DOID:8691;8.64e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.79e-26,1;DOID:0060061,9.79e-26,1;DOID:8691,9.79e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001046!1.36e-08!19;UBERON:0000162!2.22e-08!14;UBERON:0001353!2.22e-08!14;UBERON:0000163!2.22e-08!14;UBERON:0006866!2.22e-08!14;UBERON:0000164!2.22e-08!14;UBERON:0000931!2.22e-08!14;UBERON:0004122!8.39e-08!15;UBERON:0000161!1.60e-07!35;UBERON:0001949!2.06e-07!3;UBERON:0005911!2.70e-07!82;UBERON:0002367!3.07e-07!11;UBERON:0010147!3.07e-07!11;UBERON:0009846!3.07e-07!11;UBERON:0003353!3.07e-07!11;UBERON:0004902!3.07e-07!11;UBERON:0003820!3.07e-07!11;UBERON:0009847!3.07e-07!11;UBERON:0003929!3.19e-07!54;UBERON:0004119!7.16e-07!169;UBERON:0000925!7.16e-07!169;UBERON:0006595!7.16e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.52e-23;10!UBERON:0000478;4.24e-17;24!UBERON:0000178;1.02e-15;15!UBERON:0000179;1.02e-15;15!UBERON:0000463;1.02e-15;15!UBERON:0006955;1.29e-13;2!UBERON:0004801;1.29e-13;2!UBERON:0002390;8.43e-08;32!UBERON:0001987;1.59e-07;4!UBERON:0001708;1.86e-07;4!UBERON:0008895;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.52e-23,10;UBERON:0000358,3.52e-23,10;UBERON:0000307,3.52e-23,10;UBERON:0000091,3.52e-23,10;UBERON:0000087,3.52e-23,10;UBERON:0007010,3.52e-23,10;UBERON:0007806,3.52e-23,10;UBERON:0008780,3.52e-23,10;UBERON:0005728,3.52e-23,10;UBERON:0000478,4.25e-17,24;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15;UBERON:0006955,1.21e-13,2;UBERON:0004801,1.21e-13,2;UBERON:0001987,1.59e-07,4;UBERON:0004340,1.59e-07,4;UBERON:0001708,1.69e-07,4;UBERON:0008895,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.00253235151642,0.276242966807689,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,6.8199859596543,4.94255755786011,5.63878527329459,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,1.48000651186684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.659326867049332,0.876246070104404,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83847584520444,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:60933351..60933363,+ | |||
}} |
Latest revision as of 14:21, 23 July 2015
Short description: | p@chr10:60933351..60933363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:60933351..60933363, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.21e-13 | 2 |
epithelial cell of Malassez | 1.41e-09 | 3 |
epithelial cell of prostate | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.52e-23 | 10 |
blastocyst | 3.52e-23 | 10 |
blastula | 3.52e-23 | 10 |
bilaminar disc | 3.52e-23 | 10 |
inner cell mass | 3.52e-23 | 10 |
cleaving embryo | 3.52e-23 | 10 |
connecting stalk | 3.52e-23 | 10 |
inner cell mass derived epiblast | 3.52e-23 | 10 |
extraembryonic mesoderm | 3.52e-23 | 10 |
extraembryonic structure | 4.25e-17 | 24 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |
uterine epithelium | 1.21e-13 | 2 |
cervix epithelium | 1.21e-13 | 2 |
placenta | 1.59e-07 | 4 |
allantois | 1.59e-07 | 4 |
jaw skeleton | 1.69e-07 | 4 |
splanchnocranium | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.79e-26 | 1 |
cutaneous T cell lymphoma | 9.79e-26 | 1 |
mycosis fungoides | 9.79e-26 | 1 |