FFCP PHASE1:Hg19::chr10:64564798..64564848,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23506 | |||
|TSSclassifier=strong | |||
|UniProt=Q96SZ5,B3KXN9 | |||
|association_with_transcript=282bp_to_ENST00000373783,NM_032804,uc001jmg.2_5end | |||
|cluster_id=chr10:64564798..64564848,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_4_at_ADO_5end | |||
|id=chr10:64564798..64564848,+ | |||
|ontology_enrichment_celltype=CL:0000557!9.63e-08!71;CL:0002009!9.20e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.53e-07;39!CL:0000234;9.53e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.30e-09,67;CL:0002194,4.52e-09,59;CL:0000576,4.52e-09,59;CL:0000040,4.52e-09,59;CL:0000559,4.52e-09,59;CL:0000839,7.69e-09,66;CL:0002009,1.80e-08,61;CL:0000766,2.64e-07,72;CL:0000473,8.53e-07,48;CL:0000234,8.53e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.11e-13!86;UBERON:0001017!9.46e-13!82;UBERON:0000073!8.08e-12!94;UBERON:0001016!8.08e-12!94;UBERON:0001049!8.67e-11!57;UBERON:0005068!8.67e-11!57;UBERON:0006241!8.67e-11!57;UBERON:0007135!8.67e-11!57;UBERON:0000955!1.59e-10!69;UBERON:0006238!1.59e-10!69;UBERON:0002616!1.37e-09!59;UBERON:0003080!3.07e-08!42;UBERON:0002780!3.30e-08!41;UBERON:0001890!3.30e-08!41;UBERON:0006240!3.30e-08!41;UBERON:0007023!4.62e-08!115;UBERON:0000062!5.53e-08!511;UBERON:0001893!1.85e-07!34;UBERON:0002020!2.16e-07!34;UBERON:0003528!2.16e-07!34;UBERON:0002791!3.22e-07!33;UBERON:0000153!4.09e-07!129;UBERON:0007811!4.09e-07!129;UBERON:0000033!4.59e-07!123;UBERON:0004121!9.88e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-10,81;UBERON:0001016,1.38e-09,89;UBERON:0001049,1.77e-09,56;UBERON:0005068,1.77e-09,56;UBERON:0006241,1.77e-09,56;UBERON:0007135,1.77e-09,56;UBERON:0000955,3.79e-08,68;UBERON:0006238,3.79e-08,68;UBERON:0000073,1.20e-07,53;UBERON:0002616,1.20e-07,53;UBERON:0002371,1.89e-07,76 | |||
|phase1_expression=0.363356758541113,0.856402095563933,1.26858963686374,2.00146596706261,1.78784437770915,0.872338524100369,0,1.89515962028049,1.04474251279935,0,0,0.218441372130172,0,0.618831764800233,0.662794751455832,1.34465029290355,0.602694528023977,0.730310090387373,0,0.61560529038394,0.408001382488506,0.940364164434263,1.71741592278634,1.23186982565596,1.25542639594803,1.45185470921107,2.46301768349837,2.44003422072406,0,0.383829398097213,0.77408061658038,0,0,0.369754010166788,0,0.284338464974843,0.293600439334847,1.66198622559563,0.601633342410425,0.651032612147555,1.11957737119962,3.88672399222775,1.80302897343931,1.45398238779565,0.755751887377619,1.4555043671269,2.32429036905685,1.6446715520873,3.40677007984614,3.45230870786581,2.56160706529101,1.41889337933151,0.344745680736619,0.645484683583826,1.35426486594342,1.31769637679823,0.818718450173537,1.12361742222542,0,0.320929027076094,0,2.30895910130701,1.79517291859469,1.27867425159808,0.580418477257168,1.70215567407342,0,2.51248665256743,0.521482918420201,1.73751075764093,1.21079900526674,0,0.632924774881769,0.211255286311942,0.425208599930087,0.419317291016752,0.336985893439485,0.600707571366025,0.16072558669708,0.570025487482497,1.39241674039363,0.182664153764634,3.51992488922645,1.63841583378639,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0.501559486172034,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0.552700035571697,0,0.296573126324121,0,0,0.226618685395132,0,0.34362744548263,0,0.637130828648193,0,0,0,0,0,0,0,0,0.534880391567015,0,0,2.01210257911091,0.255725123687061,1.0843174571537,0,1.30361867064741,1.5905718941022,0.486634870302636,0.472674085820339,0,0.43917392846563,1.89919659471683,0,1.85392221392215,15.2537275017701,16.5423250434304,24.1983488144335,0.238490624305342,0,0,0,0,0,0,0,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,4.96971951695318,0.759783069987479,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0.49333509683432,1.24484414159907,0.538842688278752,0.163461903113459,0.605429710579726,4.03323147135999,0.70296429550139,0,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.61246251376468,0,0.516628905878827,1.18800285728205,1.23633464639278,0.910161361938026,0,0.505008341862199,0.750711119231785,0.554128230968366,0.438977620880838,0.612975591598039,1.65261864797256,0.340296549480063,0.538168907066586,1.06778694409284,0.635795703478686,0.300091096084402,0.309157587715317,0.772921620136887,0.18611685633159,0.506328996723799,0.487185025805993,0,1.01254888506529,0.646584227275248,0.710019185033229,0.503760491138201,0.67824236924195,0.57978255948989,0,0,2.92736894711029,2.38553582978673,1.51052125730374,0.932949495138334,2.77552935963191,1.82488679537915,0,2.57296375277154,1.38134921352481,1.39310378409594,0,0.709840800239063,0.842923450390509,0.723033089650446,0.661763836394364,0.435758888184812,0,0.539325232640658,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0.614942192715568,0,0.548751427043128,0,0.100528972411631,0.370353780634118,0.325808305310325,1.03993478527958,0,1.507095264676,0.939269553886573,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0.738651018262192,8.65815781015179,4.7561971932393,0,0.335964256397719,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,0.985326475791887,1.05658120815871,1.03664057770386,0.576479813667846,1.38866676769018,1.0159663086747,1.90994212779139,1.17217447210047,5.13217338068116,0.719792448923265,0.901029173531752,1.14330573052231,0.224262168690721,0,0.2933531432838,1.16344544182,3.57656445851882,1.690605505112,0.797814349754612,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,13.378615870531,5.52482800575339,6.32501818449095,0.239624855491583,0,2.85273810081437,1.01346914667305,0.821905290201534,0.716243852959582,0.784596007954691,0.591092280605782,0.646882724578552,0,1.27047312111232,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.858840442033979,1.50051156317903,0.813795071099207,0.831883446123229,0.535286966391485,1.41932173530541,0.937131319941706,0.601892199455438,2.27407504055985,0,0,0.368738337083406,0.521301686808497,0.783204629850962,0.343143423810856,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0.30239029332968,1.24053903909388,1.2276957863045,0.841980283299221,1.15325234330131,0,2.89537058058494,2.96836132889982,1.54209693802656,1.06537035187876,1.88892458831761,1.03850885836724,2.5566283261191,1.20859449591622,0.802025881213139,0.276242966807689,0.229628896329213,0.728364672026868,0.786746489756545,0.902399225814824,0.385076685522074,0,0,0.844413031143006,1.13733384070897,0.510281115829547,0.215915916102139,0,0.812839312631559,0.501689773854853,0.254876273045038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| |||
|short_description=p4@ADO | |||
}} |
Latest revision as of 19:58, 18 September 2015
Short description: | p4@ADO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADO_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 282bp_to_ENST00000373783, NM_032804, uc001jmg.2_5end |
EntrezGene: | ADO |
HGNC: | 23506 |
UniProt: | Q96SZ5B3KXN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.30e-09 | 67 |
monopoietic cell | 4.52e-09 | 59 |
monocyte | 4.52e-09 | 59 |
monoblast | 4.52e-09 | 59 |
promonocyte | 4.52e-09 | 59 |
myeloid lineage restricted progenitor cell | 7.69e-09 | 66 |
macrophage dendritic cell progenitor | 1.80e-08 | 61 |
myeloid leukocyte | 2.64e-07 | 72 |
defensive cell | 8.53e-07 | 48 |
phagocyte | 8.53e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.14e-10 | 81 |
nervous system | 1.38e-09 | 89 |
neural tube | 1.77e-09 | 56 |
neural rod | 1.77e-09 | 56 |
future spinal cord | 1.77e-09 | 56 |
neural keel | 1.77e-09 | 56 |
brain | 3.79e-08 | 68 |
future brain | 3.79e-08 | 68 |
regional part of nervous system | 1.20e-07 | 53 |
regional part of brain | 1.20e-07 | 53 |
bone marrow | 1.89e-07 | 76 |