FFCP PHASE1:Hg19::chr8:124194961..124194972,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:124194961..124194972,+
|short_description=p4@FAM83A
|description=CAGE_peak_4_at_FAM83A_5end
|association_with_transcript=40bp_to_ENST00000276699,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84985 | |EntrezGene=84985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28210 | |HGNC=28210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000276699,ENST00000522648_5end | |||
|cluster_id=chr8:124194961..124194972,+ | |||
|coexpression_cluster_id=C1072 | |||
|description=CAGE_peak_4_at_FAM83A_5end | |||
|id=chr8:124194961..124194972,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.79e-29!254;CL:0002368!3.90e-17!13;CL:0002076!8.42e-15!43;CL:0002159!1.25e-11!13;CL:0002202!3.44e-10!9;CL:0002632!3.44e-10!9;CL:0000076!3.92e-10!62;CL:0000223!3.36e-09!59;CL:0000244!2.02e-08!4;CL:0000731!2.02e-08!4;CL:0000063!5.43e-08!578;CL:0002621!4.14e-07!3;CL:0000068!6.67e-07!3;CL:0000069!6.67e-07!3;CL:0000307!6.67e-07!3;CL:0000377!6.67e-07!3;CL:0002327!7.98e-07!4;CL:0002328!8.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.44e-25;13!CL:0002159;8.51e-15;14!CL:0002076;9.99e-14;42!CL:0000307;1.13e-13;3!CL:0000362;2.71e-12;9!CL:0002202;5.72e-12;9!CL:0002632;5.72e-12;9!CL:0000575;5.87e-10;2!CL:0000317;1.81e-09;2!CL:1000448;1.81e-09;2!CL:0002308;1.81e-09;2!CL:0002140;1.81e-09;2!CL:0000312;6.09e-09;5!CL:0000240;1.63e-07;6!CL:0000311;1.63e-07;6!CL:0000079;1.63e-07;6!CL:0000237;1.63e-07;6!CL:0002621;4.01e-07;3!CL:0002231;7.16e-07;3!CL:0002328;8.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.49e-25,13;CL:0002076,2.38e-17,42;CL:0002159,5.46e-15,14;CL:0000066,1.31e-14,253;CL:0000068,1.92e-13,3;CL:0000069,1.92e-13,3;CL:0000307,1.92e-13,3;CL:0000377,1.92e-13,3;CL:0000362,2.17e-12,9;CL:0002202,1.01e-11,9;CL:0002632,1.01e-11,9;CL:0000223,1.02e-11,58;CL:0000575,3.50e-10,2;CL:0000317,1.22e-09,2;CL:1000448,1.22e-09,2;CL:0002308,1.22e-09,2;CL:0002140,1.22e-09,2;CL:0000076,4.84e-09,63;CL:0000312,6.02e-09,5;CL:0000240,1.61e-07,6;CL:0000311,1.61e-07,6;CL:0000079,1.61e-07,6;CL:0000237,1.61e-07,6;CL:0000036,1.61e-07,6;CL:0000357,1.61e-07,6;CL:0000114,1.61e-07,6;CL:0002077,3.56e-07,34;CL:0002621,3.61e-07,3;CL:0002231,9.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.13e-13;3!CL:0000223;1.13e-08;58!CL:0000357;1.63e-07;6!CL:0000114;1.63e-07;6 | |||
|ontology_enrichment_disease=DOID:305!7.54e-15!106;DOID:1749!1.41e-11!14;DOID:0050687!1.51e-10!143;DOID:162!6.17e-10!235;DOID:1036!1.41e-09!8;DOID:14566!1.90e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.14e-15;8!DOID:1749;2.21e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.08e-15,8;DOID:1749,2.06e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000065!2.84e-16!53;UBERON:0001004!4.86e-16!72;UBERON:0004119!3.25e-14!169;UBERON:0000925!3.25e-14!169;UBERON:0006595!3.25e-14!169;UBERON:0001737!6.15e-14!9;UBERON:0008947!9.87e-14!38;UBERON:0003258!9.87e-14!38;UBERON:0000072!6.37e-13!46;UBERON:0000365!5.93e-10!5;UBERON:0001557!1.47e-08!19;UBERON:0001007!1.93e-08!155;UBERON:0001555!1.93e-08!155;UBERON:0007026!1.93e-08!155;UBERON:0005910!3.33e-08!6;UBERON:0007196!9.57e-08!14;UBERON:0001558!9.57e-08!14;UBERON:0000077!1.53e-07!130;UBERON:0001949!4.14e-07!3;UBERON:0005911!6.41e-07!82;UBERON:0001041!6.92e-07!98;UBERON:0001911!7.98e-07!4;UBERON:0005333!7.98e-07!4;UBERON:0008425!7.98e-07!4;UBERON:0005311!7.98e-07!4;UBERON:0004815!8.93e-07!3;UBERON:0002031!8.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.81e-09;2!UBERON:0007771;1.81e-09;2!UBERON:0003297;1.81e-09;2!UBERON:0001821;1.81e-09;2!UBERON:0003487;1.81e-09;2!UBERON:0001820;1.81e-09;2!UBERON:0001003;2.96e-07;15!UBERON:0007376;2.96e-07;15!UBERON:0001949;4.01e-07;3!UBERON:0007196;4.54e-07;15!UBERON:0001558;4.54e-07;15!UBERON:0004815;8.53e-07;3!UBERON:0002031;8.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.22e-09,2;UBERON:0007771,1.22e-09,2;UBERON:0003297,1.22e-09,2;UBERON:0001821,1.22e-09,2;UBERON:0003487,1.22e-09,2;UBERON:0001820,1.22e-09,2;UBERON:0005089,1.22e-09,2;UBERON:0005088,1.22e-09,2;UBERON:0001003,2.60e-07,15;UBERON:0007376,2.60e-07,15;UBERON:0007383,2.60e-07,15;UBERON:0001949,3.61e-07,3;UBERON:0007196,6.27e-07,15;UBERON:0001558,6.27e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,2.10844143144775,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,4.73583874780305,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,0.818238361772504,4.58887352622406,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,2.63400684980701,2.24803506515239,7.33861498604905,0.277765335475589,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0.850650583454319,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80962293576241,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.784306353074702,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0,0,0,0,1.98341898433174,1.53752053892085,1.65896526242959,3.33820676823315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,2.68120910214315,1.08890984861323,0,2.58303223602738,3.36942951335251,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,6.15436994738562,0,0,0,0,0,0,0,0,1.19372242368845,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,1.07412704805365,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0.461701551022782,0,0,0,0,0.957003479195758,0,0,0,0,0.332423363800313,6.76786981851542,7.25431376975636,6.37722030508202,5.50285824900137,0.635746315921515,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,1.65412492502765,0,0.171986032471617,0.677294319023596,1.38869702463753,1.23173185579814,0.484945082442097,0,0.225980740780532,0,0,0,0,0.480952921509202,0,0,0,0,0,0.14405479798815,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,8.37343711643257,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.926404341482917,0,2.47364804324233,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,1.03499260351932,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,1.77290761325952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,1.2498775702396,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.5388164241167,0.286888821570705,0,0.651226148887796,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p4@FAM83A | |||
}} | }} |
Latest revision as of 00:22, 16 September 2015
Short description: | p4@FAM83A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM83A_5end |
Coexpression cluster: | C1072_leukemia_acute_chronic_Prostate_Keratinocyte_mesothelioma_Gingival |
Association with transcript: | 40bp_to_ENST00000276699, ENST00000522648_5end |
EntrezGene: | FAM83A |
HGNC: | 28210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 1.22e-09 | 2 |
epidermis gland | 1.22e-09 | 2 |
gland of integumental system | 1.22e-09 | 2 |
sebaceous gland | 1.22e-09 | 2 |
skin sebaceous gland | 1.22e-09 | 2 |
sweat gland | 1.22e-09 | 2 |
sweat gland placode | 1.22e-09 | 2 |
sebaceous gland placode | 1.22e-09 | 2 |
skin epidermis | 2.60e-07 | 15 |
outer epithelium | 2.60e-07 | 15 |
enveloping layer of ectoderm | 2.60e-07 | 15 |
gingival epithelium | 3.61e-07 | 3 |
tracheobronchial tree | 6.27e-07 | 15 |
lower respiratory tract | 6.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.08e-15 | 8 |
squamous cell carcinoma | 2.06e-07 | 14 |