FFCP PHASE1:Hg19::chr11:65407359..65407399,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=16bp_to_uc010rom.1_5end | |||
|cluster_id=chr11:65407359..65407399,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_4_at_SIPA1_5end | |||
|id=chr11:65407359..65407399,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.95e-58!140;CL:0002087!4.64e-54!119;CL:0000037!3.20e-48!172;CL:0000566!3.20e-48!172;CL:0002031!2.79e-44!124;CL:0000988!9.37e-44!182;CL:0002032!5.76e-43!165;CL:0000837!5.76e-43!165;CL:0000542!9.52e-43!53;CL:0000051!9.52e-43!53;CL:0000838!3.93e-42!52;CL:0002057!7.61e-22!42;CL:0000791!8.80e-22!18;CL:0000789!8.80e-22!18;CL:0002420!8.80e-22!18;CL:0002419!8.80e-22!18;CL:0000790!8.80e-22!18;CL:0000945!1.20e-20!24;CL:0000826!1.20e-20!24;CL:0000860!1.18e-19!45;CL:0000084!1.75e-18!25;CL:0000827!1.75e-18!25;CL:0000766!2.40e-17!76;CL:0000236!2.21e-14!14;CL:0000625!7.56e-14!11;CL:0002194!1.35e-12!63;CL:0000576!1.35e-12!63;CL:0000040!1.35e-12!63;CL:0000559!1.35e-12!63;CL:0002009!6.69e-12!65;CL:0000094!7.33e-12!8;CL:0000763!1.39e-10!112;CL:0000049!1.39e-10!112;CL:0000839!2.33e-10!70;CL:0000557!4.44e-10!71;CL:0000134!5.84e-10!358;CL:0002320!2.84e-09!365;CL:0000624!6.30e-09!6;CL:0000081!5.54e-08!11;CL:0000219!6.07e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.50e-30;18!CL:0000789;2.50e-30;18!CL:0002419;2.50e-30;18!CL:0000542;2.04e-24;53!CL:0000084;8.93e-23;25!CL:0000625;7.12e-21;11!CL:0000236;5.83e-18;13!CL:0000094;8.92e-18;8!CL:0000945;3.66e-16;24!CL:0002087;2.69e-14;104!CL:0000624;3.55e-13;6!CL:0000081;2.03e-12;11!CL:0000738;1.78e-10;136!CL:0000860;3.22e-09;33!CL:0002057;3.22e-09;33!CL:0000623;5.34e-08;3!CL:0000767;1.14e-07;3!CL:0000775;1.34e-07;3!CL:0000226;1.66e-07;3!CL:0000842;1.66e-07;3!CL:0000898;2.15e-07;3!CL:0000766;3.96e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.76e-54,136;CL:0002087,3.79e-45,115;CL:0000838,2.56e-43,52;CL:0000542,2.79e-42,53;CL:0000051,2.79e-42,53;CL:0000037,2.68e-40,168;CL:0000988,2.80e-37,177;CL:0002031,5.23e-37,120;CL:0002032,5.97e-35,161;CL:0000837,5.97e-35,161;CL:0000791,2.29e-30,18;CL:0000789,2.29e-30,18;CL:0002420,2.29e-30,18;CL:0002419,2.29e-30,18;CL:0000790,2.29e-30,18;CL:0000084,1.01e-22,25;CL:0000827,1.01e-22,25;CL:0000625,6.36e-21,11;CL:0000236,1.71e-19,14;CL:0000094,8.68e-18,8;CL:0000945,3.53e-16,24;CL:0000826,3.53e-16,24;CL:0000624,3.64e-13,6;CL:0000766,4.06e-13,72;CL:0000081,1.99e-12,11;CL:0000860,1.34e-10,42;CL:0002057,1.34e-10,42;CL:0000134,1.27e-09,354;CL:0002320,4.07e-09,361;CL:0000473,1.05e-08,48;CL:0000234,1.05e-08,48;CL:0000623,5.35e-08,3;CL:0000825,5.35e-08,3;CL:0000767,1.15e-07,3;CL:0000775,1.30e-07,3;CL:0000226,1.76e-07,3;CL:0000842,1.76e-07,3;CL:0000898,2.26e-07,3;CL:0000219,2.28e-07,386;CL:0002194,5.45e-07,59;CL:0000576,5.45e-07,59;CL:0000040,5.45e-07,59;CL:0000559,5.45e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;2.50e-30;18!CL:0000051;2.04e-24;53!CL:0002057;5.01e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-19!102;UBERON:0003061!2.21e-19!102;UBERON:0002193!5.80e-18!112;UBERON:0000178!2.36e-10!15;UBERON:0000179!2.36e-10!15;UBERON:0000463!2.36e-10!15;UBERON:0002371!3.57e-09!80;UBERON:0002384!9.81e-09!375;UBERON:0002405!3.27e-08!115;UBERON:0001474!7.05e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.57e-14;15!UBERON:0000179;8.57e-14;15!UBERON:0000463;8.57e-14;15!UBERON:0002390;4.51e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.01e-14,98;UBERON:0003061,2.01e-14,98;UBERON:0000178,8.60e-14,15;UBERON:0000179,8.60e-14,15;UBERON:0000463,8.60e-14,15;UBERON:0002193,3.37e-13,108;UBERON:0002384,1.96e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57817861960044,5.25443772479653,6.61170563034906,28.3222279331211,44.9080395773739,14.3978994683951,0,0,0,0.697204805222715,0.568676929949686,0.587200878669695,6.64794490238253,13.6370224279696,9.54847831149748,0,0,0,0.436194716338694,1.51150377475524,1.21292030593908,0.697287110717054,1.6446715520873,0.619412741790207,1.1507695692886,1.2808035326455,0.47296445977717,1.03423704220986,1.93645405075148,1.35426486594342,0.376484679085209,0.272906150057846,0.898893937780338,2.14258724659632,2.88836124368484,1.91801137739712,0.329851300186716,1.39624560335142,0.852449501065388,0.580418477257168,1.70215567407342,0.622822248995575,1.25624332628372,0.521482918420201,0.217188844705117,0,2.20966581592539,1.26584954976354,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,8.79981222306614,5.46138611262132,3.55803701545422,6.40095333849761,9.20910770182829,8.04653415936277,5.2883589822789,9.54053754535364,34.7219911156764,39.3448916878529,38.6095960406481,2.64342657158052,21.2993253932984,0.263384084775077,10.4256178160332,16.8994627982141,26.9337963689357,1.67186495390678,11.4072793321757,9.46895611469466,7.79306913631645,2.00538822393312,11.1950244840438,3.98761010250518,3.24964636518019,1.0247305578054,1.95089021339817,0.822189523018381,1.65810010671509,2.31842468588042,14.3837966267199,6.95606153033254,5.22677619024884,0.906474741580529,26.0589935649306,16.1504899376836,14.4221224451117,6.37130828648194,5.20866763085135,2.85135613334512,1.6563263098555,2.30375900077953,11.2437653897111,3.55165878066025,4.92676798152628,60.6836297106445,79.9646185392687,36.0612765668169,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,4.5313218618015,4.0039643754609,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.7121669744253,54.2892369807656,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,64.823120106434,61.4538588349624,47.7436094960664,0,0,0,0,0,41.9443933410422,11.966458368161,27.3514238867783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1279060375852,11.2171384425681,33.0855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,4.56702848308952,1.52927441428475,1.70894156152249,3.09701308095126,1.23408681925858,0.648473311192717,2.16012574895246,3.17250070517708,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0.111443384277478,0,0,0.593929361665277,0,0,0,0,0.16480387422676,0,0.19924798825107,1.65770349318689,0,0,0.984678443688556,0,0,0,0,0.295930216910801,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,2.41981432097328,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,1.24271716604159,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.177404740325278,2.41991373867136,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.4226557275834,0,2.53756578545605,2.8361470708374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,1.42095601639213,1.05527014302958,0,0,0.202117188958219,0.217716747896961,0,2.6940821205835,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,2.01273793591026,0.641136984606466 | |||
|short_description=p4@SIPA1 | |||
}} |
Latest revision as of 10:29, 19 September 2015
Short description: | p4@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIPA1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 16bp_to_uc010rom.1_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.01e-14 | 98 |
blood island | 2.01e-14 | 98 |
blood | 8.60e-14 | 15 |
haemolymphatic fluid | 8.60e-14 | 15 |
organism substance | 8.60e-14 | 15 |
hemolymphoid system | 3.37e-13 | 108 |
connective tissue | 1.96e-08 | 371 |