FFCP PHASE1:Hg19::chr12:118797475..118797527,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18133 | |||
|TSSclassifier=strong | |||
|UniProt=F5H7G4,F5H005 | |||
|association_with_transcript=0bp_to_ENST00000419821,ENST00000541786,ENST00000541878_5end | |||
|cluster_id=chr12:118797475..118797527,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_TAOK3_5end | |||
|id=chr12:118797475..118797527,- | |||
|ontology_enrichment_celltype=CL:0000037!2.79e-62!172;CL:0000566!2.79e-62!172;CL:0000988!2.16e-57!182;CL:0002032!6.23e-57!165;CL:0000837!6.23e-57!165;CL:0000738!1.08e-44!140;CL:0002031!3.45e-37!124;CL:0002087!6.33e-37!119;CL:0000542!3.79e-36!53;CL:0000051!3.79e-36!53;CL:0000838!1.36e-35!52;CL:0000763!2.08e-22!112;CL:0000049!2.08e-22!112;CL:0000945!1.20e-17!24;CL:0000826!1.20e-17!24;CL:0000084!5.24e-17!25;CL:0000827!5.24e-17!25;CL:0000791!3.26e-14!18;CL:0000789!3.26e-14!18;CL:0002420!3.26e-14!18;CL:0002419!3.26e-14!18;CL:0000790!3.26e-14!18;CL:0000236!3.97e-11!14;CL:0000766!1.10e-09!76;CL:0000625!1.18e-09!11;CL:0000839!2.02e-08!70;CL:0000557!2.85e-08!71;CL:0000134!4.32e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.22e-26;53!CL:0000945;3.98e-23;24!CL:0000084;5.74e-21;25!CL:0000791;1.78e-18;18!CL:0000789;1.78e-18;18!CL:0002419;1.78e-18;18!CL:0000236;7.50e-14;13!CL:0000625;2.19e-12;11!CL:0000988;1.47e-10;177!CL:0002087;5.76e-10;104!CL:0000738;7.68e-10;136!CL:0000624;5.85e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.16e-67,168;CL:0000988,2.13e-61,177;CL:0002032,1.98e-60,161;CL:0000837,1.98e-60,161;CL:0000738,8.60e-47,136;CL:0000542,9.75e-47,53;CL:0000051,9.75e-47,53;CL:0000838,5.43e-46,52;CL:0002087,1.63e-36,115;CL:0002031,2.54e-36,120;CL:0000945,3.99e-23,24;CL:0000826,3.99e-23,24;CL:0000084,4.50e-21,25;CL:0000827,4.50e-21,25;CL:0000763,2.31e-19,108;CL:0000049,2.31e-19,108;CL:0000791,1.63e-18,18;CL:0000789,1.63e-18,18;CL:0002420,1.63e-18,18;CL:0002419,1.63e-18,18;CL:0000790,1.63e-18,18;CL:0000236,2.23e-14,14;CL:0000625,2.10e-12,11;CL:0000134,1.07e-11,354;CL:0002320,7.99e-11,361;CL:0000219,6.85e-08,386;CL:0000624,5.37e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.22e-26;53!CL:0000790;1.78e-18;18 | |||
|ontology_enrichment_disease=DOID:2531!1.32e-24!51;DOID:0060083!1.32e-24!51;DOID:1240!6.56e-20!39;DOID:8692!2.18e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.15e-20;39!DOID:2531;8.53e-19;51!DOID:0060083;8.53e-19;51!DOID:8692;9.89e-19;31!DOID:0060058;4.65e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.22e-30,51;DOID:0060083,1.22e-30,51;DOID:1240,4.32e-25,39;DOID:8692,4.68e-19,31;DOID:0060058,4.22e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-14!102;UBERON:0003061!1.51e-14!102;UBERON:0002193!1.86e-14!112;UBERON:0000178!1.40e-07!15;UBERON:0000179!1.40e-07!15;UBERON:0000463!1.40e-07!15;UBERON:0002371!6.96e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;1.76e-08;32!UBERON:0000178;1.98e-08;15!UBERON:0000179;1.98e-08;15!UBERON:0000463;1.98e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.81e-12,98;UBERON:0003061,7.81e-12,98;UBERON:0002193,1.06e-10,108;UBERON:0002384,5.52e-10,371;UBERON:0000178,2.13e-08,15;UBERON:0000179,2.13e-08,15;UBERON:0000463,2.13e-08,15;UBERON:0004177,2.79e-07,7;UBERON:0005057,2.79e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,31.2530829509121,31.855028706579,36.9153564361156,3.54027849164014,19.5752993029578,3.71558695958582,0,0,0,37.8814610837675,16.3494617360535,9.10161361938026,3.32397245119126,3.60980005446255,4.99125002646459,0.447830948479849,9.06902264853143,2.57575567634187,0.145398238779565,1.13362783106643,0.485168122375632,0.929716147622738,1.23350366406548,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0,0,0,1.09162460023138,1.12361742222542,0.612167784741805,2.88836124368484,0,0.329851300186716,0.199463657621632,0,0.580418477257168,1.70215567407342,1.24564449799115,0.251248665256743,0,0.434377689410233,1.81619850790011,1.84138817993782,1.26584954976354,1.47878700418359,0.637812899895131,0.628975936525128,0.673971786878971,0.300353785683013,0.48217676009124,0.855038231223746,0.99458338599545,0,22.879511779972,27.3069305631066,27.5747868697702,25.6038133539904,34.0336588980611,31.0366317575421,28.4249295297491,17.1729675816366,38.7064818994425,29.9490966579179,36.698229900022,5.28685314316103,4.48406850385229,8.16490662802739,33.8340804595793,17.6854843237124,16.4481199199607,41.1278778661068,36.8292161295957,41.6634069046565,46.7584148178987,28.9667187901451,24.7468962278863,27.9132707175363,34.933698425687,19.9822458772053,16.6475964876644,21.8702413122889,21.0026013517245,43.1806597745228,49.082852406642,62.6045537729929,36.5874333317419,37.0521550621041,27.9750960329403,30.9264700934367,49.3388399438031,31.8565414324097,33.8563396005338,32.3153695112447,38.2460802457543,45.5632335709729,39.9778324967507,40.4889100995269,29.5606078891577,33.869932861755,16.5812921385775,17.5237528698187,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,1.29818957461873,1.74129737299267,1.32957960518865,40.0664248832975,37.7516641114884,48.2894751728434,0.596287222100115,0,1.38856200643038,0,0.419499436209906,0.275118041940067,1.04497483268405,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,2.05389375053383,0.44905874525234,1.0135033243499,0,0,0.549605231791222,1.31780417436063,7.75560528296651,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,26.487785964879,1.10689594688802,0,0,1.1240175325762,0.603173834469785,0,0,0,0,0,0,0.577465791044295,0,0.190254152234598,0,0,0.738651018262192,8.42415354501256,2.0808362720422,0.93733833986777,0,0,0,0,0,6.40462209264727,5.19485760678034,4.56121854189699,4.17947864909188,5.17593977048158,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,0,0,0,16.1402607350679,33.4952292343276,14.2314199407281,16.5562516800875,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3911725976282,16.3942792622149,14.1947651878581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,3.28889814968902,0.784306353074702,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0.384380134730212,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,1.22386941009813,0,0,0,1.1486170010348,22.3276948062155,17.5866557642746,15.9501212408766,27.6348859531035,36.6112423046713,20.1026726469742,27.5416032991439,17.4487538784739,0,0,1.22520107990516,12.4488127334232,29.2866502342183,27.7453189058815,17.5368900001705,8.78149234304393,6.51118258450047,17.3572337833584,9.08941432768755,23.3061657834171,11.868203309726,18.0181880138977,12.5317238545034,5.75592044525451,18.3070405618217,9.68638594517028,3.83261613921294,18.8927939615671,5.53033375755224,4.69719826574073,7.00766395190016,7.03397143447345,21.4372753899337,3.69262196843137,0.540911356951966,5.99529542396076,2.81974010175699,16.8426486367398,0.146508179271894,0,2.34031106982705,0,0,0,0,0,0,2.78271762557265,0.494411622680279,0,0.597743964753209,22.1027132424918,0,0,17.6011271809329,0,7.3692047940808,0.358042349351218,3.06943422136123,1.1837208676432,7.18449277040819,0,0,0.185536196323703,0,0,0,0,2.84483620713749,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,22.482525603062,2.35470384592537,3.49044531990328,5.8654871760467,4.11731322067253,2.85296697858933,11.9544851616237,13.3506726343518,0,0,0,0,4.97630965539252,6.98814759576379,4.27721101453538,0,0.247127877893006,0.104421949505455,0.202203398942031,0.802577647298789,0,30.2874950098006,0,0,0,2.41981432097328,0.61214552326098,1.0741718536843,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0.17472666824203,0,0,0,0,2.42472541221049,0,0.677942222341597,0,2.78200456384186,0,0,0.160317640503067,4.0556069000477,0,0.864542502924636,0,0.686379991447858,3.88947954568004,8.32491988288398,0.471388069233591,0.135904206073614,0.836822770498666,0,0,0,0.273810757783986,10.2197270453578,0,9.72683210833464,0,0,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0,0,0.0984274815147488,24.1318996387486,0,0,0,0,0,2.92466059016951,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0.633602019116439,1.25501137532991,4.98979513030558,0,0,0,0,0,0,0,5.08973628645902,0,0,0.293104467356165,0,0.258565912723101,0.52893040697076,0.171086837884329,15.5059304909668,4.59185874041087,1.72924735609633,5.38510771951354,14.3888146325466,0,27.7687124308443,30.0020391151985,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.18628920882415,0,0,2.12308764558307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.963099152036517,21.8730423202424,0.260994291965212,3.85400073370863,0.231522474323834,0.97894681802587,0,0,0,4.77060694053879,0.771656153083659,5.74404298220447,0,0.345430341731199,2.12701969324168,0.138258436151731,1.16916185303633,1.0629187225069,1.96278473107013,0.327609848846413,0,2.3244333569449,1.79988656269437,6.29481205195431,7.92188906439752,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,22.7910443053622,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,1.27078232765372,0,0,0,0.376051641746286,0,0,0,2.94789451518174,9.16707734545681,0.202612753855184,0,0,0,0,1.64477330057155,0,0,0.255524855279191,0,0,0,0,0.354809480650555,6.79880526579098,0.685952037749674,0.135939465953663,0.0657727735628491,3.90039674917095,0,0.549451649953598,0.157115589916002,2.80272163313789,0,0,0,0.357382720883282,0,1.27865567904938,0,0,0,0,0,2.15113679410139,0,0,0.423387050190929,0,0.93061915699296,0,0,0.294450700845729,18.8972783722518,0,0,0,1.45713297917742,0,0,0,0,0.109940516745429,0,12.1163428229473,5.02686989159102,0,0.490296643507811,0,0.392616934229891,0.594092800654172,0.4226557275834,0,18.0449122521319,8.37952543656503,4.4973520166218,0,1.05868461514708,0,1.46067277649303,5.04602211744995,0.286679166302903,0,0,0,7.40637576721561,0,0,0,0,0,0,0,0.26721740526556,0,0,0.227336094654718,0,0,0.20686599172379,1.49263787330687,1.66645102024618,42.434913762256,36.1895584344852,2.01837352645104,0.25458863311266,0.202117188958219,0.870866991587845,0,14.6827475571801,2.7254438049217,0,0.0814032686109745,0,0,3.77265848847665,0,0.488965776731466,0.406896178315738,0,12.6802489962347,13.1433081844326 | |||
|short_description=p3@TAOK3 | |||
}} |
Latest revision as of 17:33, 16 September 2015
Short description: | p3@TAOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TAOK3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000419821, ENST00000541786, ENST00000541878_5end |
EntrezGene: | TAOK3 |
HGNC: | 18133 |
UniProt: | F5H7G4F5H005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.16e-67 | 168 |
hematopoietic cell | 2.13e-61 | 177 |
hematopoietic oligopotent progenitor cell | 1.98e-60 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-60 | 161 |
leukocyte | 8.60e-47 | 136 |
lymphocyte | 9.75e-47 | 53 |
common lymphoid progenitor | 9.75e-47 | 53 |
lymphoid lineage restricted progenitor cell | 5.43e-46 | 52 |
nongranular leukocyte | 1.63e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 2.54e-36 | 120 |
lymphocyte of B lineage | 3.99e-23 | 24 |
pro-B cell | 3.99e-23 | 24 |
T cell | 4.50e-21 | 25 |
pro-T cell | 4.50e-21 | 25 |
myeloid cell | 2.31e-19 | 108 |
common myeloid progenitor | 2.31e-19 | 108 |
mature alpha-beta T cell | 1.63e-18 | 18 |
alpha-beta T cell | 1.63e-18 | 18 |
immature T cell | 1.63e-18 | 18 |
mature T cell | 1.63e-18 | 18 |
immature alpha-beta T cell | 1.63e-18 | 18 |
B cell | 2.23e-14 | 14 |
CD8-positive, alpha-beta T cell | 2.10e-12 | 11 |
mesenchymal cell | 1.07e-11 | 354 |
connective tissue cell | 7.99e-11 | 361 |
motile cell | 6.85e-08 | 386 |
CD4-positive, alpha-beta T cell | 5.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.81e-12 | 98 |
blood island | 7.81e-12 | 98 |
hemolymphoid system | 1.06e-10 | 108 |
connective tissue | 5.52e-10 | 371 |
blood | 2.13e-08 | 15 |
haemolymphatic fluid | 2.13e-08 | 15 |
organism substance | 2.13e-08 | 15 |
hemopoietic organ | 2.79e-07 | 7 |
immune organ | 2.79e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.22e-30 | 51 |
immune system cancer | 1.22e-30 | 51 |
leukemia | 4.32e-25 | 39 |
myeloid leukemia | 4.68e-19 | 31 |
lymphoma | 4.22e-07 | 10 |