FFCP PHASE1:Hg19::chr12:25101890..25101898,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z5L0 | |||
|association_with_transcript=78bp_to_ENST00000539780_5end | |||
|cluster_id=chr12:25101890..25101898,- | |||
|description=CAGE_peak_22_at_BCAT1_5end | |||
|id=chr12:25101890..25101898,- | |||
|ontology_enrichment_celltype=CL:0000548!2.04e-10!679;CL:0000004!2.04e-10!679;CL:0000255!2.04e-10!679;CL:0000012!4.31e-10!682;CL:0000039!1.10e-08!7;CL:0000586!1.10e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.23e-68;7!CL:0000586;2.23e-68;7!CL:0002598;6.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.97e-69,7;CL:0000586,9.97e-69,7;CL:0002598,6.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.21e-21;10!UBERON:0005564;1.21e-21;10 | |||
|ontology_enrichment_disease=DOID:14566!1.42e-15!239;DOID:162!6.97e-15!235;DOID:3095!2.95e-08!22;DOID:2994!2.95e-08!22;DOID:0050687!6.73e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.09e-29;22!DOID:2994;3.09e-29;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.73e-29,22;DOID:2994,2.73e-29,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.93e-16;8!UBERON:0003135;1.32e-11;11!UBERON:0000991;1.82e-10;21!UBERON:0003688;9.67e-10;6!UBERON:0002358;9.67e-10;6!UBERON:0003684;9.67e-10;6!UBERON:0001178;9.67e-10;6!UBERON:0002323;1.55e-07;45!UBERON:0004457;8.83e-07;9!UBERON:0000042;8.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.56e-16,8;UBERON:0003135,1.18e-11,11;UBERON:0000991,1.87e-10,21;UBERON:0009196,1.87e-10,21;UBERON:0009117,1.87e-10,21;UBERON:0005564,1.87e-10,21;UBERON:0002323,4.67e-10,46;UBERON:0004176,5.44e-10,22;UBERON:0003688,1.32e-09,6;UBERON:0002358,1.32e-09,6;UBERON:0003684,1.32e-09,6;UBERON:0001178,1.32e-09,6;UBERON:0004458,2.02e-09,49;UBERON:0003886,1.61e-08,54;UBERON:0002553,1.68e-07,61 | |||
|phase1_expression=0.726713517082227,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.542270404062111,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.567208902984407,0,0.175669571386252,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0.70445216541493,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0.306923946576125,0,1.15325234330131,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0.604297247958111,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.206082023295445,0,0.082509499920588,0,0,0,0,0.616194468458578,0.15350367472613,0,0.214840489736547,0.435050081742686,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,1.39453664789186,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,1.28381696410176,0.636406495851874,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0.144269212976445,0.213425530045242,0.637705090915289,0,0,0.211673582723883,0.649243880549111,0.280797178113459,0.228234679033192,0.313359791546046,0,0.50787533340481,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0.278406173895242,1.23087398947712,0.540911356951966,0,0,0.561421621224659,0,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.341826167541004,2.99733075704478,3.8595787096202,1.4124158349861,0.31900115973192,0.641183153813036,0,1.02193298195737,0,0,0,0.19606253431774,0.167821586975843,0,0.158936578980379,0,0,0.424059214301822,0,0,0,0,0,0.370691816839509,0,0,0,0,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0.0801588202515337,0,1.9980960958213,0,0,0,0,0.124252535565433,0,0,0,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0.247247575143499,0.13480708770837,0,0.254019996197353,0,0,0.482259445395058,0.275078873194468,0.83088067605837,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0.326587360109409,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0.147855149989634,0.477890301491107,0.449803112163605,0,0,0.265841714557995,0,0.601030435988874,0,0.406870733204662,0,0.322231671127465,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0.694567422971502,0,0.179088841081487,0,0.657852148736121,0.176689145945881,0.38582807654183,0.337884881306145,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0.567515953566836,0.184105950251841,0,0,0.383683113910955,0.862598491173454,0,0.327628914576042,0.169732529954025,0,0,0.5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| |||
|short_description=p22@BCAT1 | |||
}} |
Latest revision as of 22:08, 17 September 2015
Short description: | p22@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_BCAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENST00000539780_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | B7Z5L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.97e-69 | 7 |
germ cell | 9.97e-69 | 7 |
bronchial smooth muscle cell | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 8.56e-16 | 8 |
male reproductive organ | 1.18e-11 | 11 |
gonad | 1.87e-10 | 21 |
indifferent external genitalia | 1.87e-10 | 21 |
indifferent gonad | 1.87e-10 | 21 |
gonad primordium | 1.87e-10 | 21 |
body cavity | 4.67e-10 | 46 |
external genitalia | 5.44e-10 | 22 |
omentum | 1.32e-09 | 6 |
peritoneum | 1.32e-09 | 6 |
abdominal cavity | 1.32e-09 | 6 |
visceral peritoneum | 1.32e-09 | 6 |
body cavity or lining | 2.02e-09 | 49 |
body cavity precursor | 1.61e-08 | 54 |
anatomical cavity | 1.68e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.73e-29 | 22 |
germ cell cancer | 2.73e-29 | 22 |