FFCP PHASE1:Hg19::chr12:28126518..28126555,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:28126518..28126555,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr12:28126518..28126555,- | |||
|id=chr12:28126518..28126555,- | |||
|ontology_enrichment_celltype=CL:0002076!2.97e-25!43;CL:0002159!2.48e-20!13;CL:0000223!4.45e-20!59;CL:0002166!9.70e-18!3;CL:0002251!2.01e-15!21;CL:0000066!1.23e-14!254;CL:0000244!3.21e-13!4;CL:0000731!3.21e-13!4;CL:0000317!3.17e-12!2;CL:1000448!3.17e-12!2;CL:0002308!3.17e-12!2;CL:0002140!3.17e-12!2;CL:0000362!2.39e-11!8;CL:0002368!3.32e-10!13;CL:0002077!1.43e-09!33;CL:0000240!1.03e-08!6;CL:0000311!1.03e-08!6;CL:0000079!1.03e-08!6;CL:0000237!1.03e-08!6;CL:0000036!1.03e-08!6;CL:0000357!1.03e-08!6;CL:0000114!1.03e-08!6;CL:0002231!1.58e-08!3;CL:0002621!1.58e-08!3;CL:0000068!3.29e-08!3;CL:0000069!3.29e-08!3;CL:0000307!3.29e-08!3;CL:0000377!3.29e-08!3;CL:0000220!1.47e-07!246;CL:0002321!1.85e-07!248;CL:0000076!5.36e-07!62;CL:1001319!9.79e-07!1;CL:1000600!9.79e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.41e-09;3!CL:0002231;1.41e-09;3!CL:0000307;1.41e-09;3!CL:0002621;1.41e-09;3!CL:0000244;1.69e-07;4!CL:0000731;1.69e-07;4!CL:0002076;1.76e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.93e-10,42;CL:0002166,1.19e-09,3;CL:0000068,1.41e-09,3;CL:0000069,1.41e-09,3;CL:0000307,1.41e-09,3;CL:0000377,1.41e-09,3;CL:0002621,1.67e-09,3;CL:0002231,1.81e-09,3;CL:0000244,1.80e-07,4;CL:0000731,1.80e-07,4;CL:0000223,3.21e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.41e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!1.63e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.82e-08;14!DOID:5409;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.19e-08,14;DOID:5409,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000365!5.15e-18!5;UBERON:0003729!2.45e-17!5;UBERON:0005910!4.85e-15!6;UBERON:0001708!1.95e-13!4;UBERON:0001704!1.95e-13!4;UBERON:0003343!1.01e-12!4;UBERON:0004785!1.01e-12!4;UBERON:0002419!3.17e-12!2;UBERON:0007771!3.17e-12!2;UBERON:0003297!3.17e-12!2;UBERON:0001821!3.17e-12!2;UBERON:0003487!3.17e-12!2;UBERON:0001820!3.17e-12!2;UBERON:0005089!3.17e-12!2;UBERON:0005088!3.17e-12!2;UBERON:0000344!5.33e-11!12;UBERON:0004119!9.94e-11!169;UBERON:0000925!9.94e-11!169;UBERON:0006595!9.94e-11!169;UBERON:0002090!4.13e-09!6;UBERON:0000161!6.69e-09!35;UBERON:0000974!9.29e-09!10;UBERON:0001949!1.58e-08!3;UBERON:0001004!1.64e-08!72;UBERON:0003102!3.87e-07!95;UBERON:0002079!5.26e-07!1;UBERON:0004645!9.79e-07!1;UBERON:0001256!9.79e-07!1;UBERON:0001259!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.41e-09;3!UBERON:0000486;3.13e-09;12!UBERON:0003729;1.36e-08;13!UBERON:0003343;1.69e-07;4!UBERON:0001708;1.69e-07;4!UBERON:0004785;1.69e-07;4!UBERON:0008895;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.67e-09,3;UBERON:0003729,1.42e-08,13;UBERON:0001708,1.49e-07,4;UBERON:0008895,1.49e-07,4;UBERON:0003343,1.59e-07,4;UBERON:0004785,1.59e-07,4;UBERON:0000161,8.16e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,1.41775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,1.29151611801369,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,1.41563668017288,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56738749661032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:28126518..28126555,- | |||
}} |
Latest revision as of 07:56, 24 July 2015
Short description: | p@chr12:28126518..28126555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28126518..28126555, - |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.93e-10 | 42 |
epithelial cell of Malassez | 1.19e-09 | 3 |
duct epithelial cell | 1.41e-09 | 3 |
branched duct epithelial cell | 1.41e-09 | 3 |
tracheal epithelial cell | 1.41e-09 | 3 |
tracheoblast | 1.41e-09 | 3 |
gingival epithelial cell | 1.67e-09 | 3 |
epithelial cell of prostate | 1.81e-09 | 3 |
transitional epithelial cell | 1.80e-07 | 4 |
urothelial cell | 1.80e-07 | 4 |
endodermal cell | 3.21e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.67e-09 | 3 |
mouth mucosa | 1.42e-08 | 13 |
jaw skeleton | 1.49e-07 | 4 |
splanchnocranium | 1.49e-07 | 4 |
mucosa of oral region | 1.59e-07 | 4 |
respiratory system mucosa | 1.59e-07 | 4 |
orifice | 8.16e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.19e-08 | 14 |
lung small cell carcinoma | 1.31e-07 | 4 |