FFCP PHASE1:Hg19::chr12:42719947..42719983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51535 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19369 | |||
|TSSclassifier=strong | |||
|UniProt=F8W6A0,F8WF16,Q8NEY8,E9PAX8,F8VP48,F8VRK2 | |||
|association_with_transcript=0bp_to_ENST00000256678,ENST00000317560,ENST00000337898,ENST00000358314,ENST00000395568,ENST00000395580,ENST00000432191,ENST00000449194,ENST00000549774,ENST00000550535,ENST00000551406,ENST00000551723,ENST00000552202,ENST00000552429,ENST00000552761,NM_001143787,NM_001143788,NM_001143789,NM_016488,NM_201438,NM_201439,NM_201440,NM_201515,uc001rna.2,uc001rnb.2,uc001rnc.2,uc001rnd.2,uc001rne.2,uc001rnf.2,uc001rng.1,uc001rnh.1,uc001rni.1,uc010skq.1,uc010skr.1,uc010sks.1,uc010skt.1,uc010sku.1_5end | |||
|cluster_id=chr12:42719947..42719983,+ | |||
|description=CAGE_peak_1_at_PPHLN1_5end | |||
|id=chr12:42719947..42719983,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.91e-25!172;CL:0000566!8.91e-25!172;CL:0002032!1.03e-21!165;CL:0000837!1.03e-21!165;CL:0000988!2.18e-21!182;CL:0000542!5.07e-19!53;CL:0000051!5.07e-19!53;CL:0000838!9.64e-19!52;CL:0000738!4.73e-16!140;CL:0002031!5.88e-13!124;CL:0002087!3.00e-12!119;CL:0000791!8.10e-11!18;CL:0000789!8.10e-11!18;CL:0002420!8.10e-11!18;CL:0002419!8.10e-11!18;CL:0000790!8.10e-11!18;CL:0000084!6.07e-10!25;CL:0000827!6.07e-10!25;CL:0000945!1.55e-08!24;CL:0000826!1.55e-08!24;CL:0000134!1.92e-08!358;CL:0000236!3.76e-08!14;CL:0002320!4.76e-08!365;CL:0000003!5.51e-08!722;CL:0000219!9.27e-08!390;CL:0000625!1.02e-07!11;CL:0000763!6.58e-07!112;CL:0000049!6.58e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.83e-11;53!CL:0000791;8.24e-11;18!CL:0000789;8.24e-11;18!CL:0002419;8.24e-11;18!CL:0000084;6.39e-10;25!CL:0000945;1.56e-08;24!CL:0000236;6.57e-08;13!CL:0000625;1.01e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.29e-24,168;CL:0000988,8.42e-22,177;CL:0002032,1.50e-21,161;CL:0000837,1.50e-21,161;CL:0000542,5.07e-19,53;CL:0000051,5.07e-19,53;CL:0000838,9.64e-19,52;CL:0000738,6.76e-16,136;CL:0002031,8.33e-13,120;CL:0002087,4.22e-12,115;CL:0000791,8.10e-11,18;CL:0000789,8.10e-11,18;CL:0002420,8.10e-11,18;CL:0002419,8.10e-11,18;CL:0000790,8.10e-11,18;CL:0000084,6.07e-10,25;CL:0000827,6.07e-10,25;CL:0000945,1.55e-08,24;CL:0000826,1.55e-08,24;CL:0000134,2.72e-08,354;CL:0000236,3.76e-08,14;CL:0002320,6.70e-08,361;CL:0000625,1.02e-07,11;CL:0000219,1.31e-07,386;CL:0000763,9.67e-07,108;CL:0000049,9.67e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;1.83e-11;53!CL:0000790;8.24e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!1.27e-09!51;DOID:0060083!1.27e-09!51;DOID:1240!1.42e-09!39;DOID:8692!1.10e-08!31;DOID:14566!1.35e-08!239;DOID:162!2.36e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.51e-08;31!DOID:1240;6.11e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.27e-09,51;DOID:0060083,1.27e-09,51;DOID:1240,1.42e-09,39;DOID:8692,1.10e-08,31;DOID:14566,1.35e-08,239;DOID:162,2.36e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.95e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-07,371 | |||
|phase1_expression=51.0516245750264,40.2508984915048,51.4483574950295,39.0285863577209,48.2717981981471,52.3403114460221,27.8629865985142,38.5349122790367,22.4619640251861,18.1843113011117,5.58240934377942,22.9363440736681,20.5738243018194,73.1459145993876,53.0235801164665,81.3513427206648,53.03711846611,54.773256779053,46.3536158850982,29.7952960545827,21.0120711981581,16.6131002383387,61.5407372331772,56.3922631300283,55.9920172592821,75.0379644444881,71.2633116425529,78.2385166257972,62.5449200189757,100.179472903373,41.3359049253923,45.0516399994674,23.4940616647035,36.9754010166788,63.1357684729458,76.2027086132579,82.5017234530921,38.2256831886995,66.1796676651468,63.5841851197446,50.1570662297431,46.6406879067331,44.5605732007143,47.9814187972564,57.0592674970102,54.096245644883,44.8588041227971,48.5178107865754,48.0044874887411,52.6477077949535,58.9169625016931,52.0260905754888,54.1250718756491,65.1939530419664,52.8163297717933,45.1781614902251,54.0354177114535,42.9221855290112,49.8916744564571,60.0137280632295,64.5730497057032,46.1791820261403,63.0305158084357,47.3109473091291,42.6607580784018,57.3059076938051,44.8432019276814,48.7422410598082,69.878711068307,54.9487777103945,38.1401686659022,58.5561441220228,45.8870461789282,75.4181372133632,65.6947286891985,67.0907665626803,53.6930856880247,59.019518886712,67.5047464127737,49.5922174109772,56.2934196473425,62.4711405875048,87.9981222306614,89.5667322469896,96.0669994172639,86.1995049584345,96.895828862715,91.3856379527628,110.394493755072,90.6351066808596,85.3819453664173,102.766508139914,94.0392141188063,85.9113635763668,110.420186907363,97.1887272820034,133.565933907293,114.759142722756,111.230410958734,116.528987287303,126.131917187199,124.99022071397,134.430442601459,107.845322264848,126.975146121655,136.021811274343,137.839166656393,67.2479428559795,71.532641157933,63.96634489083,55.2700035571697,110.12517257932,117.146384898028,143.936965512266,134.85082570842,98.465818804185,127.229203875838,123.705880373747,164.209780120657,101.303801755063,102.871185709314,109.301985111563,121.965846452996,132.210169322514,91.1994303832125,98.262559598267,87.860695670552,114.915843638097,123.824810647764,116.004347510122,26.8187552945358,41.5834533016254,53.1908257269086,44.0955765909171,39.1043570295994,44.1781882830512,76.3474509169055,45.7436778084478,59.4623999961987,61.4190430971302,53.1400453443413,46.7595299526834,13.1146303785315,22.6178510098502,58.418530857843,43.010045112919,57.8367128257063,102.073987202686,97.8111297434019,154.154863051769,32.3982724007729,30.1082108287144,27.7712401286075,37.8756321089086,32.3014565881628,36.0404634941488,31.5582399470584,48.3239339646645,62.9706284955477,65.93996071464,38.6716144424781,57.0204079288884,27.334950445395,60.2967451767225,42.1273812898515,61.527512787731,52.7644025671499,40.877967415446,24.5306619945413,34.1735637444526,34.9915330907078,52.7121669744253,50.4114343392823,17.4437620857014,49.6971951695319,53.6913369457818,79.4455084879313,77.4458876021797,48.9442367433733,40.9294648103884,44.8345782064761,34.0401216815681,52.2834539471607,46.4751818640424,48.5481852246972,29.8174132460515,44.9417221094399,14.2936073418616,57.1252940599487,43.9263302589226,54.5487684014074,38.4010810565111,43.2200761462911,58.1466339747309,52.4676220125076,65.4706911271723,43.0868507502942,38.0160914330257,40.7990433309619,18.2032272387605,5.03032699271367,59.9276565676476,58.1801117404633,58.4605283671626,53.1162921265814,50.8769741026373,29.5968976045996,51.2713467883295,78.3932707960327,49.3317568170891,54.8903624003265,65.1197678503153,63.3773054816399,87.0825025354227,55.0905894741506,64.9788879128875,69.2777106696122,95.4199666642753,47.4977476994265,75.4887085343852,64.2567362455072,65.6903680444214,66.8068733703321,56.4321691236827,69.277514630072,71.701148847251,70.2568547306469,68.2528306855649,71.9240506362319,52.9707991128543,65.6034212276634,64.9659699154977,31.2899064659632,33.44852878603,19.3388889893473,56.1885192918695,50.531563716871,77.3726472260579,80.0777277870983,78.3285847121317,73.7866677579716,75.3862876559725,80.1974692595507,71.325762016727,77.3112572593864,78.87316717401,22.1446636387394,5.60967095213783,16.8745344645874,7.3504355692771,36.7589600983309,48.1585336172037,34.8566044942028,78.1389685963932,82.4022538238861,57.6467842603046,61.8991609704648,34.8445435098621,55.9946376332784,66.5710920689828,12.7065239071027,6.23960871167747,47.6293428683402,58.5448545124138,54.7124515138929,52.1162876417476,50.9284063834272,58.2177705837871,23.7061319387783,23.1791263765616,50.4744862479165,44.6948146415944,44.1434551997523,68.4256988103472,94.5739381759579,104.204696473154,53.735113621709,76.146091890658,28.7537009373908,104.44460643394,60.3131772990598,50.7953883074892,70.6187771743111,51.506912837963,74.0385447446691,26.7391897890794,26.9600128583108,10.2643467613623,61.7993231146974,67.8775310727253,68.0266909660776,34.8727672314072,30.9531648871629,53.9036400783983,67.6091073413178,14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| |||
|short_description=p1@PPHLN1 | |||
}} |
Latest revision as of 07:56, 18 September 2015
Short description: | p1@PPHLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPHLN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256678, ENST00000317560, ENST00000337898, ENST00000358314, ENST00000395568, ENST00000395580, ENST00000432191, ENST00000449194, ENST00000549774, ENST00000550535, ENST00000551406, ENST00000551723, ENST00000552202, ENST00000552429, ENST00000552761, NM_001143787, NM_001143788, NM_001143789, NM_016488, NM_201438, NM_201439, NM_201440, NM_201515, uc001rna.2, uc001rnb.2, uc001rnc.2, uc001rnd.2, uc001rne.2, uc001rnf.2, uc001rng.1, uc001rnh.1, uc001rni.1, uc010skq.1, uc010skr.1, uc010sks.1, uc010skt.1, uc010sku.1_5end |
EntrezGene: | PPHLN1 |
HGNC: | 19369 |
UniProt: | F8W6A0F8WF16Q8NEY8E9PAX8F8VP48F8VRK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.29e-24 | 168 |
hematopoietic cell | 8.42e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.50e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-21 | 161 |
lymphocyte | 5.07e-19 | 53 |
common lymphoid progenitor | 5.07e-19 | 53 |
lymphoid lineage restricted progenitor cell | 9.64e-19 | 52 |
leukocyte | 6.76e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 8.33e-13 | 120 |
nongranular leukocyte | 4.22e-12 | 115 |
mature alpha-beta T cell | 8.10e-11 | 18 |
alpha-beta T cell | 8.10e-11 | 18 |
immature T cell | 8.10e-11 | 18 |
mature T cell | 8.10e-11 | 18 |
immature alpha-beta T cell | 8.10e-11 | 18 |
T cell | 6.07e-10 | 25 |
pro-T cell | 6.07e-10 | 25 |
lymphocyte of B lineage | 1.55e-08 | 24 |
pro-B cell | 1.55e-08 | 24 |
mesenchymal cell | 2.72e-08 | 354 |
B cell | 3.76e-08 | 14 |
connective tissue cell | 6.70e-08 | 361 |
CD8-positive, alpha-beta T cell | 1.02e-07 | 11 |
motile cell | 1.31e-07 | 386 |
myeloid cell | 9.67e-07 | 108 |
common myeloid progenitor | 9.67e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.12e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.27e-09 | 51 |
immune system cancer | 1.27e-09 | 51 |
leukemia | 1.42e-09 | 39 |
myeloid leukemia | 1.10e-08 | 31 |
disease of cellular proliferation | 1.35e-08 | 239 |
cancer | 2.36e-08 | 235 |