FFCP PHASE1:Hg19::chr12:49663609..49663634,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20768 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000548470_5end | |||
|cluster_id=chr12:49663609..49663634,+ | |||
|description=CAGE_peak_3_at_TUBA1C_5end | |||
|id=chr12:49663609..49663634,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.35e-18!679;CL:0000004!3.35e-18!679;CL:0000255!3.35e-18!679;CL:0000012!2.41e-17!682;CL:0002321!1.28e-12!248;CL:0000066!2.43e-12!254;CL:0000220!2.48e-12!246;CL:0000144!3.35e-11!625;CL:0000055!3.29e-10!180;CL:0000003!3.59e-10!722;CL:0000222!9.68e-10!119;CL:0000063!1.63e-09!578;CL:0002371!1.57e-07!591 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.77e-10,250;CL:0000222,5.12e-10,121;CL:0000393,9.08e-07,61;CL:0000211,9.08e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.53e-07!239;DOID:162!9.91e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.05e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.77e-10;9!UBERON:0001557;1.77e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.01e-11,9;UBERON:0007503,1.26e-07,78;UBERON:0001557,2.88e-07,19 | |||
|phase1_expression=0.363356758541113,2.35510576280081,0.281908808191942,2.00146596706261,0.446961094427288,3.48935409640147,0,0,0.522371256399677,0.491467873003018,4.18680700783456,0.436882744260345,0.527533956456907,0,0,1.34465029290355,1.20538905604795,2.19093027116212,2.43966399395253,0.123121058076788,1.63200552995402,0.313454721478088,0.572471974262113,2.87436292653057,0.627713197974014,0.840547463227464,0.492603536699674,0.472264687882075,0,0,0,0,3.0120591877825,0.739508020333575,0.232401601740905,0.284338464974843,0.293600439334847,0,0,0,0.223915474239924,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0.512321413058201,0.709446689665756,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.390178042679635,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0.383587685530591,1.44575660953827,0.50133791063589,0.579386075843295,0.795285947051099,0.486634870302636,0.283604451492204,1.77383517970051,1.14185221401064,0.0654895377488563,0.364295288292542,2.59549109949101,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.13061588384802,1.67799774483962,3.30141650328081,0.626984899610432,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0.24406205754817,0,3.24056779152704,0.982297011124877,0.44905874525234,0.563057402416611,0,0,1.64881569537367,0,0,0,0.993943903390637,0.886413581652058,0.397227542439656,1.14734648299525,1.06400514659507,2.24271040056923,1.06748995729705,1.2333377420858,0.622422070799533,0.67355336034844,1.30769522490767,0.605429710579726,0.576175924479999,0,0.624320153660641,1.71141546463335,1.49448680551801,1.29177948508141,2.10434827678571,0.98315564691574,0.61246251376468,1.96534907698829,0.206651562351531,0,1.23633464639278,0.910161361938026,1.43723628363248,0,1.7516592782075,0,0.877955241761676,3.37136575378922,0.45071417671979,1.13432183160021,0.179389635688862,0,0,0,0.103052529238439,1.03056216018252,0.37223371266318,0.168776332241266,0.68205903612839,0.504867548488229,0,0.323292113637624,0,0.503760491138201,0.508681776931463,0,0.272746120590835,0,0.853815942907168,0.530119073285941,0.232387885739037,0.621966330092223,2.27088765788066,1.09493207722749,0,0.643240938192885,4.14404764057442,0.464367928031979,0,1.65629520055781,2.52877035117153,1.20505514941741,3.97058301836618,2.39667388501647,1.66089433377768,2.56179485504312,2.35465758150415,2.30848294167834,0,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,2.20731549707325,0.491953754172454,0.857839051492628,0.658501712451753,1.1240175325762,1.50793458617446,0.462942225792648,0,2.07986957055916,0,0.231860809950154,0.117408694235822,0.433099343283221,0.462985512576611,1.71228737011138,0,0,0,0,0.297262324577456,0,0.335964256397719,1.41775097242386,0,0.581267877027924,0.766765358330422,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.719792448923265,0.901029173531752,0,0.336393253036082,0.43596006883328,0.4400297149257,0.258543431515556,0,3.381211010224,0.26593811658487,0,0.257207374262142,1.41849132023278,1.8649552531127,0,0,0,0.65147236858747,0.355391948742546,1.58390374586686,0.301439377059586,0,2.19940580600526,1.2162378064119,2.51128545716063,6.32501818449095,0.239624855491583,0,0,0.868687840005475,1.02738161275192,0.179060963239896,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,2.28767947683888,11.062597305424,0.630809660135739,0.819989904948992,0,0,1.03473071292505,0,0.368738337083406,0.60818530127658,0,0.686286847621712,0,0,0,0.909382714338778,0,2.11673205330776,0,0.460385919864187,1.68396056659844,0,0,0.482561763430822,0,2.7757744884478,0.887808626565635,0.410635780069046,3.11552657510173,3.02146983995894,0.604297247958111,2.00506470303285,0.644566922551274,0.918515585316854,2.73136752010076,1.31124414959424,0,0.462092022626489,0.784349769176855,5.84556898613043,0.211103257785751,1.13733384070897,1.70093705276516,1.72732732881711,0,0.812839312631559,0,0.254876273045038,2.49322802678617,2.23874754722178,0.657779629937804,0.261435451024901,0.256450125116389,1.96808787419823,0,0,1.37354197227515,0.247528499761764,0,4.55042172225565,1.6068392984416,0.193341436584244,1.54048617114644,1.5350367472613,2.06754858726796,0.107420244868274,1.0151168573996,1.02271952899321,0.178064071293475,0.165284915360978,0.576570202095319,0.127612712494584,0.50578890427775,2.78907329578371,1.5740617341532,0.6970372701606,0,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0,1.14378116354295,1.79128453917934,0,1.27281299170375,2.35484592059769,0.719489830333259,1.64722217841633,1.06031162111118,0.606547444719948,0,0.842516912477962,0.48763373908959,1.70599442741899,1.05650146756755,0.136499911407986,0.848432591722276,2.26016233240486,0,1.32687795048244,0,0,0.655894752046633,0.405820753925408,3.717881977197,0.845086807596724,0.143411352204052,0.687743287091848,0.7133421029625,1.77380532035299,0.844430541190656,0.329294892959902,0.379473173765715,1.04980416073495,0.192444225451024,1.34060455107157,0,0.188287601553558,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.961416640147258,0,0.245040215981032,0.557409525377156,0.144269212976445,0.213425530045242,0.159426272728822,1.99579371432817,0,0.423347165447766,0.324621940274555,0.561594356226918,0.456469358066384,0,0,0.846458889008016,0.321176150207399,1.41259795033733,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.781552381608161,1.11362469558097,0,0.540911356951966,0,0,0,0,0.121360521749513,0.111443384277478,0.852408440419239,0,0,0.307160702099232,0,0,0.111308705022906,1.31843099381408,0.422250816255987,0.19924798825107,0.276283915531148,0,0.306806047506464,0.123084805461069,0.622079175323615,0.629078458031288,0.358042349351218,0.511572370226872,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,1.30213880542617,0.174919999992391,0.724999575434793,0.910347586283997,0.762760950878299,0.945550727071745,0,0.583209226766509,0.694499979733169,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.807818799687949,0.54323685961004,1.27600463892768,0.549585560411174,0.533034776018635,3.06579894587209,0.784901281975124,0.166211681900156,1.35357396370308,0.392125068635479,1.67821586975843,0.569261198172555,0.317873157960757,2.95397290339238,0.489698424477443,0.282706142867882,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0.208843899010911,0.067401132980677,0,0,3.10173141666632,0.19566461893209,0.242780379534093,0.394584402849391,0,0.61214552326098,0.126373159256976,0.450970258243478,0.518440956986236,0.664653872707185,1.323967823502,0.313932918407225,1.19472429772959,1.13843818411917,0.138674673013139,2.08271686002157,0.195984794828755,0.0870592065804026,0.34945333648406,0.343972064943233,0.870806981601766,0.292357268344742,1.14961639874493,0.193978032976839,0,0,1.64450309576101,0.596143835108969,0,0.782205530939212,0.400794101257669,0.426905989478705,1.39866726707491,0.288180834308212,0.114536596165916,0.343189995723929,0.576219191952599,0.248505071130865,0,0.271808412147228,0.418411385249333,0.611989305817931,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0.717873024576814,1.99679000498991,0.858452096273142,0,0,1.44119953416961,0,0.945398187686684,1.56590130924216,1.07845670166696,0.0984274815147488,0.338693328263138,0,0,2.57205037544031,3.85110422472255,5.40072439437941,0.2249738915515,0,0,0,0.157611414598396,0.157363764404994,0.211200673038813,0.537862017998534,0,0.714695326373367,0,0.25426853765475,1.62899880526114,3.45688596480507,0.979762080328227,1.19730191562487,0.410462603746695,0.340776043570843,0.906496732161005,0.293104467356165,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0.243585196761792,0.638341257770182,0,0.2506898940227,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0,0,1.12482367165896,0.151649117541648,0.285465333544967,2.58792401667989,0.936669811613763,0.869526171664951,0.895528817321244,0.701139929541673,0,0.189403005275089,1.0062716070103,1.77962244319307,0.457680136793847,0.756154618816195,0.466311601748341,1.03498604992744,1.11507737014592,1.79921244865442,0,2.48823724704513,0.265841714557995,0.521745061811734,0.150257608997218,3.42724690951916,1.22061219961398,0.727394636810238,0.322231671127465,0,1.19428766609585,3.60024988196838,0.686791410365586,1.01024846629776,0,0.385239660814607,0.643324774124777,1.04397716786085,2.04035332961045,1.62065732026684,1.71315693154527,0.895444205407437,0.308801447160972,1.09642024789354,0.530067437837643,3.08662461233464,1.35153952522458,1.02496607435179,1.0362910251936,1.51929978088691,0,1.16916185303633,0.398594520940089,0.163565394255844,0,5.16123108382811,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0.368211900503681,0,1.24415452006595,0,0,0.157265941855896,0.109209638192014,0.169732529954025,0.425149840203366,0.867550349813015,0,0.318004350653419,0.0788617450012534,0.80057074828547,0.705351887381368,1.8374728641192,0,0,0,0,0,0,0,0,0.196295437002051,0,1.65085738669511,0.346576998451015,0.381382095467167,0,0,0.0752103283492573,0.80682027481408,0,0.523813388962845,1.31017534008077,0,0,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0.336283722218824,0.606965604236632,0,0.177404740325278,0.230467975111559,0,0,0,0.236387681767936,0.778619813244484,0,0.157115589916002,0,0,1.72742072974897,0.47775168788705,0.142953088353313,0,0.464965701472501,0,0,0,0.3414369541879,0,0,0.236664001461131,0.255640214277473,0,1.60374807980835,1.24082554265728,3.82215575590973,0.894843454382338,0.392600934460972,0.487671699929078,0,0,0,0,0.467878926924211,0,0.237840181555137,0,0.219881033490858,0.301925687133347,0.0771741581079447,0.218559560503957,1.41095188908457,0,0,0,0,0,1.0195626881269,0.0939839179798536,0,0,0.178553938605658,0.352894871715692,0.160482733378337,0,0,0,0,0.0679914901909147,0,0,1.48798007266701,0.462175628631418,1.73050624849516,0.252332849670158,1.20192129160065,0.886889507080059,1.63182127587171,1.06886962106224,1.10273879441814,6.26768848230938,0.0757786982182394,0.803892390468535,0,0,0,0.476128862927481,0,0.186224142887574,0.672791175483681,0.12729431655633,0,2.39488422686657,0.342233301085281,0,0.143444410785353,0.332660356546013,0.162806537221949,0.747091421144008,0,0.269475606319761,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@TUBA1C | |||
}} |
Latest revision as of 16:06, 18 September 2015
Short description: | p3@TUBA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TUBA1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000548470_5end |
EntrezGene: | TUBA1C |
HGNC: | 20768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.77e-10 | 250 |
mesodermal cell | 5.12e-10 | 121 |
electrically responsive cell | 9.08e-07 | 61 |
electrically active cell | 9.08e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.01e-11 | 9 |
epithelial vesicle | 1.26e-07 | 78 |
upper respiratory tract | 2.88e-07 | 19 |