FFCP PHASE1:Hg19::chr13:42265492..42265503,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:42265492..42265503,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr13:42265492..42265503,- | |||
|id=chr13:42265492..42265503,- | |||
|ontology_enrichment_celltype=CL:0002057!2.24e-12!42;CL:0000860!2.70e-11!45;CL:0002334!9.85e-11!12;CL:0000048!5.93e-10!430;CL:0000723!1.27e-09!436;CL:0002579!2.10e-09!3;CL:0000034!3.42e-09!444;CL:0000594!3.91e-08!3;CL:0002194!7.15e-08!63;CL:0000576!7.15e-08!63;CL:0000040!7.15e-08!63;CL:0000559!7.15e-08!63;CL:0002009!1.61e-07!65;CL:0000055!3.55e-07!180;CL:0000839!9.97e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.02e-29;33!CL:0002057;2.02e-29;33!CL:0000473;3.69e-21;39!CL:0000234;3.69e-21;39!CL:0000576;7.75e-16;48!CL:0000511;3.26e-12;1!CL:0002625;3.26e-12;1!CL:0002581;3.26e-12;1!CL:0000216;3.26e-12;1!CL:0000766;8.39e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.15e-25,42;CL:0002057,2.15e-25,42;CL:0000473,4.59e-22,48;CL:0000234,4.59e-22,48;CL:0002194,2.14e-17,59;CL:0000576,2.14e-17,59;CL:0000040,2.14e-17,59;CL:0000559,2.14e-17,59;CL:0002009,8.57e-17,61;CL:0000839,1.92e-15,66;CL:0000557,3.39e-15,67;CL:0000766,4.59e-14,72;CL:0000511,2.75e-12,1;CL:0002625,2.75e-12,1;CL:0000216,2.75e-12,1;CL:0002581,3.08e-12,1;CL:0000763,5.68e-09,108;CL:0000049,5.68e-09,108;CL:0002087,2.40e-08,115;CL:0002031,6.05e-08,120;CL:0000738,7.45e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.49e-11!167;UBERON:0003081!1.34e-07!216;UBERON:0001474!2.38e-07!86;UBERON:0004765!3.60e-07!101;UBERON:0001434!3.60e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.26e-12;1!UBERON:0001343;3.26e-12;1!UBERON:0004910;3.26e-12;1!UBERON:0004813;3.26e-12;1!UBERON:0004909;9.81e-07;2!UBERON:0005406;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.09e-17,82;UBERON:0004765,5.47e-16,90;UBERON:0002204,8.70e-15,167;UBERON:0001434,3.07e-14,100;UBERON:0002371,2.89e-13,76;UBERON:0001136,2.75e-12,1;UBERON:0001343,2.75e-12,1;UBERON:0004910,2.75e-12,1;UBERON:0005154,2.75e-12,1;UBERON:0005295,2.75e-12,1;UBERON:0004813,2.75e-12,1;UBERON:0005297,2.75e-12,1;UBERON:0005294,2.75e-12,1;UBERON:0010141,2.75e-12,1;UBERON:0005891,2.75e-12,1;UBERON:0002405,1.27e-10,93;UBERON:0003081,3.43e-10,203;UBERON:0002390,5.12e-10,98;UBERON:0003061,5.12e-10,98;UBERON:0002193,5.68e-09,108;UBERON:0004909,9.02e-07,2;UBERON:0005406,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76769459269806,6.91633907628572,8.51336027598907,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,3.62836430205388,2.99195486432448,4.26224750532694,0.290209238628584,0,1.24564449799115,8.29120595347253,5.21482918420201,8.25317609879443,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0.896974044789907,0.511707249066704,0.482561763430822,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,1.09883357782012,1.73269949833235,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,1.06461206063404,1.73986598415015,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0.842516912477962,0,0.974853958525138,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,0.554805861502613,0.189403005275089,0,0,0,0,0,0.443565449968902,0,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:42265492..42265503,- | |||
}} |
Latest revision as of 16:03, 24 July 2015
Short description: | p@chr13:42265492..42265503, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42265492..42265503, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.15e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.15e-25 | 42 |
defensive cell | 4.59e-22 | 48 |
phagocyte | 4.59e-22 | 48 |
monopoietic cell | 2.14e-17 | 59 |
monocyte | 2.14e-17 | 59 |
monoblast | 2.14e-17 | 59 |
promonocyte | 2.14e-17 | 59 |
macrophage dendritic cell progenitor | 8.57e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.92e-15 | 66 |
granulocyte monocyte progenitor cell | 3.39e-15 | 67 |
myeloid leukocyte | 4.59e-14 | 72 |
androgen binding protein secreting cell | 2.75e-12 | 1 |
seminiferous tubule epithelial cell | 2.75e-12 | 1 |
Sertoli cell | 2.75e-12 | 1 |
perirenal preadipocyte | 3.08e-12 | 1 |
myeloid cell | 5.68e-09 | 108 |
common myeloid progenitor | 5.68e-09 | 108 |
nongranular leukocyte | 2.40e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 6.05e-08 | 120 |
leukocyte | 7.45e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.09e-17 | 82 |
skeletal element | 5.47e-16 | 90 |
musculoskeletal system | 8.70e-15 | 167 |
skeletal system | 3.07e-14 | 100 |
bone marrow | 2.89e-13 | 76 |
mesothelium | 2.75e-12 | 1 |
seminiferous tubule of testis | 2.75e-12 | 1 |
epithelium of male gonad | 2.75e-12 | 1 |
epithelial cord | 2.75e-12 | 1 |
sex cord | 2.75e-12 | 1 |
seminiferous tubule epithelium | 2.75e-12 | 1 |
testis sex cord | 2.75e-12 | 1 |
genital ridge | 2.75e-12 | 1 |
primitive sex cord of indifferent gonad | 2.75e-12 | 1 |
coelomic epithelium | 2.75e-12 | 1 |
immune system | 1.27e-10 | 93 |
lateral plate mesoderm | 3.43e-10 | 203 |
hematopoietic system | 5.12e-10 | 98 |
blood island | 5.12e-10 | 98 |
hemolymphoid system | 5.68e-09 | 108 |
epithelium of gonad | 9.02e-07 | 2 |
perirenal fat | 9.54e-07 | 2 |