FFCP PHASE1:Hg19::chr13:78130706..78130715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:78130706..78130715,+ | |||
|coexpression_cluster_id=C1599 | |||
|description=CAGE_peak_at_chr13:78130706..78130715,+ | |||
|id=chr13:78130706..78130715,+ | |||
|ontology_enrichment_celltype=CL:0001014!1.01e-21!2;CL:0001016!1.01e-21!2;CL:0000240!3.49e-15!6;CL:0000311!3.49e-15!6;CL:0000079!3.49e-15!6;CL:0000237!3.49e-15!6;CL:0000036!3.49e-15!6;CL:0000357!3.49e-15!6;CL:0000114!3.49e-15!6;CL:0002336!4.91e-11!1;CL:0002261!4.91e-11!1;CL:0002170!4.91e-11!1;CL:0000453!3.00e-09!5;CL:0000312!9.57e-09!5;CL:0000840!7.57e-08!5;CL:0001029!7.57e-08!5;CL:0002159!2.10e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0001014;8.99e-131;2!CL:0001016;8.99e-131;2!CL:0000453;2.87e-53;5!CL:0000840;1.22e-44;5!CL:0000990;3.09e-30;8!CL:0000451;5.49e-25;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.99e-131,2;CL:0001016,8.99e-131,2;CL:0000453,2.87e-53,5;CL:0000840,1.22e-44,5;CL:0001029,1.22e-44,5;CL:0000990,3.09e-30,8;CL:0000451,5.49e-25,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!3.41e-16!10;UBERON:0009145!3.41e-16!10;UBERON:0006562!9.57e-15!11;UBERON:0001723!2.42e-14!3;UBERON:0001033!2.42e-14!3;UBERON:0010056!2.42e-14!3;UBERON:0007029!9.57e-12!1;UBERON:0000989!1.18e-11!1;UBERON:0008811!1.18e-11!1;UBERON:0006258!1.18e-11!1;UBERON:0005876!1.18e-11!1;UBERON:0004874!1.18e-11!1;UBERON:0002372!1.31e-11!1;UBERON:0001961!1.31e-11!1;UBERON:0001744!1.31e-11!1;UBERON:0001735!1.31e-11!1;UBERON:0002363!3.63e-11!1;UBERON:0007647!3.63e-11!1;UBERON:0010115!3.63e-11!1;UBERON:0008814!8.52e-11!15;UBERON:0000020!9.51e-11!23;UBERON:0001032!2.70e-10!24;UBERON:0004456!2.70e-10!24;UBERON:0001557!1.27e-08!19;UBERON:0001444!4.65e-07!48;UBERON:0001003!5.92e-07!14;UBERON:0007376!5.92e-07!14;UBERON:0007383!5.92e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.39e-66;1!UBERON:0000014;8.69e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.39e-66,1;UBERON:0000014,8.69e-18,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69968669861801,16.2498410457169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5999078056559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:78130706..78130715,+ | |||
}} |
Latest revision as of 17:14, 24 July 2015
Short description: | p@chr13:78130706..78130715, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:78130706..78130715, + |
Coexpression cluster: | C1599_skin_immature_uterus_salivary_cervix_penis_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.99e-131 | 2 |
immature CD1a-positive Langerhans cell | 8.99e-131 | 2 |
Langerhans cell | 2.87e-53 | 5 |
immature conventional dendritic cell | 1.22e-44 | 5 |
common dendritic progenitor | 1.22e-44 | 5 |
conventional dendritic cell | 3.09e-30 | 8 |
dendritic cell | 5.49e-25 | 10 |
Ontology term | p-value | n |
---|---|---|
surface | 2.39e-66 | 1 |
zone of skin | 8.69e-18 | 4 |