FFCP PHASE1:Hg19::chr14:75078662..75078675,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |||
|TSSclassifier=strong | |||
|UniProt=G3V3X5 | |||
|association_with_transcript=99bp_to_ENST00000556690_5end | |||
|cluster_id=chr14:75078662..75078675,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_6_at_LTBP2_5end | |||
|id=chr14:75078662..75078675,- | |||
|ontology_enrichment_celltype=CL:0000055!1.34e-25!180;CL:0000057!6.82e-21!75;CL:0000222!4.99e-17!119;CL:0002371!3.90e-15!591;CL:0000220!3.73e-14!246;CL:0002321!1.34e-13!248;CL:0000144!4.99e-13!625;CL:0000183!2.43e-12!59;CL:0000680!5.14e-11!57;CL:0000056!5.14e-11!57;CL:0000355!5.14e-11!57;CL:0000187!3.63e-10!54;CL:0000192!1.28e-09!42;CL:0000514!1.28e-09!42;CL:0000115!1.83e-09!35;CL:0000359!3.12e-09!32;CL:0002620!4.67e-09!23;CL:0002139!1.69e-08!24;CL:0002078!2.73e-08!44;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000548!5.65e-08!679;CL:0000004!5.65e-08!679;CL:0000255!5.65e-08!679;CL:0000071!6.68e-08!18;CL:0002546!6.68e-08!18;CL:0000012!1.81e-07!682;CL:0000213!8.51e-07!57;CL:0000215!8.51e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.92e-10;23!CL:0000359;2.09e-09;32!CL:0000057;3.13e-09;73!CL:0000115;4.52e-09;36!CL:0002139;5.35e-08;24!CL:0000071;1.24e-07;18!CL:0002320;3.12e-07;188!CL:0000192;5.47e-07;43!CL:0002334;7.77e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.93e-23,76;CL:0000222,4.96e-17,121;CL:0002321,6.79e-15,250;CL:0000680,1.73e-10,58;CL:0000056,1.73e-10,58;CL:0000355,1.73e-10,58;CL:0002620,4.33e-10,23;CL:0000359,7.42e-10,32;CL:0000115,8.89e-10,36;CL:0000187,1.43e-09,55;CL:0000192,2.24e-09,43;CL:0000514,2.24e-09,43;CL:0002078,4.87e-09,45;CL:0002139,5.70e-08,24;CL:0000071,1.25e-07,18;CL:0002546,1.25e-07,18;CL:0000393,2.63e-07,61;CL:0000211,2.63e-07,61;CL:0000213,4.66e-07,58;CL:0000215,4.66e-07,58;CL:0002334,8.79e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.24e-07;18!CL:0000514;5.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.76e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.55e-23!79;UBERON:0007798!2.55e-23!79;UBERON:0000055!5.22e-19!69;UBERON:0001981!1.62e-18!60;UBERON:0007500!1.62e-18!60;UBERON:0004537!1.62e-18!60;UBERON:0006965!1.62e-18!60;UBERON:0004872!2.79e-17!84;UBERON:0000914!1.31e-15!83;UBERON:0002329!1.31e-15!83;UBERON:0003077!1.31e-15!83;UBERON:0003059!1.31e-15!83;UBERON:0007282!1.31e-15!83;UBERON:0009618!1.31e-15!83;UBERON:0007285!1.31e-15!83;UBERON:0001637!4.98e-15!42;UBERON:0003509!4.98e-15!42;UBERON:0004572!4.98e-15!42;UBERON:0004535!1.13e-14!110;UBERON:0001009!1.14e-14!113;UBERON:0003914!1.16e-14!118;UBERON:0003102!4.67e-14!95;UBERON:0000475!8.34e-14!365;UBERON:0000119!8.69e-14!312;UBERON:0000468!1.34e-13!659;UBERON:0000486!1.52e-13!82;UBERON:0000483!3.78e-13!309;UBERON:0005256!1.71e-12!143;UBERON:0004573!3.79e-12!33;UBERON:0004571!3.79e-12!33;UBERON:0000467!7.00e-12!625;UBERON:0000480!1.11e-11!626;UBERON:0004290!1.84e-11!70;UBERON:0002100!4.04e-11!216;UBERON:0001444!2.09e-10!48;UBERON:0000477!9.89e-10!286;UBERON:0000490!1.57e-09!138;UBERON:0001134!1.63e-09!61;UBERON:0002036!1.63e-09!61;UBERON:0003082!1.63e-09!61;UBERON:0002385!2.30e-09!63;UBERON:0001015!2.30e-09!63;UBERON:0000383!2.30e-09!63;UBERON:0000947!3.49e-09!21;UBERON:0010191!3.49e-09!21;UBERON:0000481!1.22e-08!347;UBERON:0002097!1.43e-08!40;UBERON:0002199!2.52e-08!45;UBERON:0002416!2.52e-08!45;UBERON:0004111!3.14e-08!241;UBERON:0001986!6.68e-08!18;UBERON:0004638!6.68e-08!18;UBERON:0004852!6.68e-08!18;UBERON:0003104!1.94e-07!238;UBERON:0009142!1.94e-07!238;UBERON:0005085!2.21e-07!29;UBERON:0006914!2.67e-07!25;UBERON:0000487!2.76e-07!22;UBERON:0002050!8.39e-07!605;UBERON:0005423!8.39e-07!605;UBERON:0000923!9.75e-07!604;UBERON:0005291!9.75e-07!604;UBERON:0006598!9.75e-07!604;UBERON:0002532!9.75e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.05e-13;42!UBERON:0003509;6.05e-13;42!UBERON:0004572;6.05e-13;42!UBERON:0004573;2.94e-12;33!UBERON:0004571;2.94e-12;33!UBERON:0007500;4.39e-10;56!UBERON:0001981;4.39e-10;56!UBERON:0004537;4.39e-10;56!UBERON:0002049;1.02e-09;75!UBERON:0007798;1.02e-09;75!UBERON:0003914;1.43e-09;74!UBERON:0000947;1.44e-09;21!UBERON:0010191;1.44e-09;21!UBERON:0000055;2.01e-09;65!UBERON:0004638;1.24e-07;18!UBERON:0001986;1.24e-07;18!UBERON:0004852;1.24e-07;18!UBERON:0002097;1.79e-07;41!UBERON:0006914;2.24e-07;25!UBERON:0000487;3.60e-07;22!UBERON:0001444;4.30e-07;48!UBERON:0002384;8.03e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.28e-23,78;UBERON:0007798,1.28e-23,78;UBERON:0000055,5.59e-19,68;UBERON:0007500,1.27e-18,59;UBERON:0001981,1.27e-18,59;UBERON:0004537,1.27e-18,59;UBERON:0006965,1.27e-18,59;UBERON:0001637,2.21e-16,42;UBERON:0003509,2.21e-16,42;UBERON:0004572,2.21e-16,42;UBERON:0004872,3.64e-15,83;UBERON:0004535,1.04e-14,109;UBERON:0003102,4.84e-14,99;UBERON:0001009,5.44e-14,112;UBERON:0000486,1.08e-13,83;UBERON:0007503,1.11e-13,78;UBERON:0003914,3.03e-13,117;UBERON:0004573,4.18e-13,33;UBERON:0004571,4.18e-13,33;UBERON:0002329,1.99e-11,71;UBERON:0003059,1.99e-11,71;UBERON:0007282,1.99e-11,71;UBERON:0004290,1.99e-11,71;UBERON:0009618,1.99e-11,71;UBERON:0007524,2.30e-11,73;UBERON:0003077,5.11e-11,72;UBERON:0007285,5.11e-11,72;UBERON:0000119,5.80e-11,309;UBERON:0000033,1.07e-10,56;UBERON:0000483,2.35e-10,306;UBERON:0001444,5.88e-10,49;UBERON:0002097,8.94e-10,41;UBERON:0000947,1.05e-09,21;UBERON:0010191,1.05e-09,21;UBERON:0001134,2.76e-09,62;UBERON:0002036,2.76e-09,62;UBERON:0003082,2.76e-09,62;UBERON:0002199,3.11e-09,46;UBERON:0002416,3.11e-09,46;UBERON:0000490,6.03e-09,148;UBERON:0000153,1.11e-08,62;UBERON:0007811,1.11e-08,62;UBERON:0002385,1.55e-08,64;UBERON:0001015,1.55e-08,64;UBERON:0000383,1.55e-08,64;UBERON:0004923,6.36e-08,66;UBERON:0005085,7.14e-08,31;UBERON:0004638,1.25e-07,18;UBERON:0001986,1.25e-07,18;UBERON:0004852,1.25e-07,18;UBERON:0006914,2.06e-07,25;UBERON:0000487,3.23e-07,22;UBERON:0003104,7.41e-07,160;UBERON:0009142,7.41e-07,160;UBERON:0000165,7.48e-07,29;UBERON:0000930,7.48e-07,29 | |||
|phase1_expression=3.27021082687002,5.35251309727458,4.36958652697511,5.00366491765652,3.12872766099101,3.48935409640147,0,0.631719873426831,2.08948502559871,1.72013755551056,0,13.5433650720707,31.9158043656429,2.97039247104112,3.31397375727916,6.05092631806598,5.42425075221579,2.92124036154949,3.90346239032406,6.03293184576261,7.34402488479311,4.70182082217132,1.43117993565528,4.51685602740518,2.63639543149086,0,0,0,0,0,0,0.919421224478927,3.614471025339,2.21852406100073,0,0,0,0,0,0,2.01523926815932,0,2.31818010870768,0,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,2.89151321907653,7.01873074890245,4.77993512570718,7.15757352345989,14.1124112387764,3.30871860074237,6.65188192387692,4.91874799881506,1.24430121722827,4.73583874780305,3.70784442784429,0,0,0,0,0,0,6.75792185046797,3.4409383804245,12.844198559481,6.78369530308812,7.1314904155684,8.52865930014209,5.8518590630307,6.71883573840255,5.33649394030065,3.3472061276467,3.62546385398232,0.760272105718513,0.732186172644509,4.41195696415042,7.29127753093584,5.17938424047663,5.83776368828041,6.0810199460994,7.66583187329416,5.69559395740877,4.03043836646896,0,0,2.61656431285521,10.4364109856017,4.81195944325403,7.81214166797991,18.0707071071753,5.32002573297536,1.12135520028461,4.2699598291882,5.18001851676036,0.622422070799533,2.15537075311501,0.980771418680752,4.99479511228274,10.94734256512,5.38939293217732,2.49728061464256,3.99330275081114,2.54062756938062,1.05691048779388,3.23745888736263,2.94946694074722,2.65400422631361,6.87872176945901,4.85631171526098,15.4440371446667,17.308685049499,2.73048408581408,4.31170885089743,6.56510844420858,3.87867411603089,5.26421819419948,7.46261955497424,5.51678032438235,10.817140241275,1.36118619792025,7.35497506324334,7.26095121983129,3.60284231971255,13.8041904198825,4.53431128649131,11.3361837620077,8.56137539125313,13.1645539148188,3.50773218580315,9.08761587278812,7.36399189138395,8.56724101139703,13.845374108148,2.61955455391865,2.03472710772585,11.9821728961244,3.00020732649918,5.44928731239107,0,0,0,0.310983165046111,0,0,7.8224766164908,18.6539872075937,2.76269842704961,14.8597736970233,5.0531563716871,0,0,0,0,0,0,0,0,0,4.42893272774789,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0,2.05881372358231,4.93876284338815,2.24803506515239,2.6137532827024,4.72201070308501,5.53874119027552,4.15973914111831,2.88662684050547,0.463721619900307,7.98379120803587,1.15493158208859,0.462985512576611,1.52203321787679,0,0,0.984868024349589,0.234004265139238,1.33768046059855,6.56136837907439,6.88726725615324,5.81277898693785,2.4180801129769,3.19697332365358,8.05103626246943,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,4.03671903643299,4.3596006883328,3.44689943358465,13.0564432915356,7.15312891703765,3.381211010224,4.25500986535793,6.24044621468197,4.62973273671856,0,3.46348832720929,0.142977993658148,2.71310802695722,0.823240336780769,0.65147236858747,0.355391948742546,3.16780749173372,1.50719688529793,7.84380112740265,2.49932477955143,0,0,0,0.958499421966331,1.14861935834114,8.5582143024431,6.51515880004106,3.49309748335652,3.58121926479791,0,0,0.215627574859517,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,2.20844685094452,4.50153468953709,4.06897535549603,4.99130067673937,5.17444067511769,9.14674007196821,9.48845461440977,5.11608369537122,4.5481500811197,5.17365356462525,7.3064815838898,2.39679919104214,3.38846096425523,14.0976833373173,6.86286847621712,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,11.164851351845,12.4304198363331,8.13914273855913,12.1732191792916,6.65219423786715,7.39928037260594,7.42090332224955,2.31314540703983,4.08391968220192,2.95657761649713,3.11552657510173,2.5566283261191,0,10.4263364557708,0.368323955743585,0.918515585316854,0.182091168006717,0.655622074797121,4.96319574198153,2.0794141018192,4.70609861506113,5.84556898613043,2.95544560900052,9.09867072567173,4.25234263191289,4.75015015424707,10.7959076883203,6.77366093859632,8.02703638167765,1.01950509218015,1.66215201785745,11.1937377361089,0,0,2.3080511260475,4.59220503979588,1.62689197332152,0.9273691048295,0,0,3.44559322797703,7.80072295243825,4.82051789532479,3.963499449977,0.770243085573222,2.45605879561807,2.20538515975249,2.0409846524972,2.32026710262766,1.27839941124151,4.98579399621729,5.95025695299521,8.64855303142978,5.74257206225629,2.6301023022443,0.464845549297286,29.2775482552495,4.1822236209636,1.84820148105653,5.32306030317022,4.34966496037536,6.85699610684504,2.57624796135584,3.72158369359667,6.01120906965579,2.2875623270859,3.32667128704734,2.99557291623744,4.13664222303718,2.35484592059769,1.07923474549989,0.274537029736055,0.824686816419805,2.22400729730648,4.75530963519025,3.37006764991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| |||
|short_description=p6@LTBP2 | |||
}} |
Latest revision as of 01:14, 16 September 2015
Short description: | p6@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 99bp_to_ENST00000556690_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V3X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.93e-23 | 76 |
mesodermal cell | 4.96e-17 | 121 |
embryonic cell | 6.79e-15 | 250 |
muscle precursor cell | 1.73e-10 | 58 |
myoblast | 1.73e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.73e-10 | 58 |
skin fibroblast | 4.33e-10 | 23 |
vascular associated smooth muscle cell | 7.42e-10 | 32 |
endothelial cell | 8.89e-10 | 36 |
muscle cell | 1.43e-09 | 55 |
smooth muscle cell | 2.24e-09 | 43 |
smooth muscle myoblast | 2.24e-09 | 43 |
meso-epithelial cell | 4.87e-09 | 45 |
endothelial cell of vascular tree | 5.70e-08 | 24 |
blood vessel endothelial cell | 1.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-07 | 18 |
electrically responsive cell | 2.63e-07 | 61 |
electrically active cell | 2.63e-07 | 61 |
lining cell | 4.66e-07 | 58 |
barrier cell | 4.66e-07 | 58 |
preadipocyte | 8.79e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.14e-07 | 14 |