FFCP PHASE1:Hg19::chr15:79296820..79296829,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:79296820..79296829,- | |||
|description=CAGE_peak_at_chr15:79296820..79296829,- | |||
|id=chr15:79296820..79296829,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.05e-15;2!CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:0002224;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.54e-15,2;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4;CL:0000076,1.03e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.52e-09!14;DOID:1909!6.67e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.89e-33;14!DOID:1909;2.05e-15;2!DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.55e-33,14;DOID:1909,2.74e-15,2;DOID:4362,5.38e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0003343;2.26e-08;4!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0004785;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.54e-15,2;UBERON:0004801,1.54e-15,2;UBERON:0003343,2.26e-08,4;UBERON:0004785,2.26e-08,4;UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0.845302752556,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32949287252801,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,1.48000651186684,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,1.14186133417987,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,1.28400018965175,0.924205329202706,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,3.17605384544123,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:79296820..79296829,- | |||
}} |
Latest revision as of 04:39, 25 July 2015
Short description: | p@chr15:79296820..79296829, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:79296820..79296829, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.54e-15 | 2 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
squamous epithelial cell | 1.03e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.54e-15 | 2 |
cervix epithelium | 1.54e-15 | 2 |
mucosa of oral region | 2.26e-08 | 4 |
respiratory system mucosa | 2.26e-08 | 4 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.55e-33 | 14 |
melanoma | 2.74e-15 | 2 |
cervical cancer | 5.38e-07 | 5 |