FFCP PHASE1:Hg19::chr17:41158760..41158822,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3430 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5399 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000246911,ENST00000536969,uc010whj.1_5end | |||
|cluster_id=chr17:41158760..41158822,+ | |||
|coexpression_cluster_id=C2138 | |||
|description=CAGE_peak_1_at_IFI35_5end | |||
|id=chr17:41158760..41158822,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.34e-16!63;CL:0000576!1.34e-16!63;CL:0000040!1.34e-16!63;CL:0000559!1.34e-16!63;CL:0000766!5.63e-16!76;CL:0002057!6.35e-16!42;CL:0002009!1.76e-15!65;CL:0000860!4.40e-15!45;CL:0000839!3.35e-14!70;CL:0000557!1.81e-13!71;CL:0002320!9.48e-13!365;CL:0002087!9.64e-13!119;CL:0000738!2.37e-12!140;CL:0000134!2.98e-11!358;CL:0002031!3.34e-11!124;CL:0000048!4.47e-10!430;CL:0000003!2.05e-09!722;CL:0000219!2.80e-09!390;CL:0000723!2.95e-09!436;CL:0000034!3.17e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-11;33!CL:0002057;2.25e-11;33!CL:0000473;2.26e-11;39!CL:0000234;2.26e-11;39!CL:0000576;1.10e-10;48!CL:0000766;9.89e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.30e-18,48;CL:0000234,7.30e-18,48;CL:0002194,7.77e-18,59;CL:0000576,7.77e-18,59;CL:0000040,7.77e-18,59;CL:0000559,7.77e-18,59;CL:0000766,5.72e-17,72;CL:0002009,1.33e-16,61;CL:0000860,6.33e-16,42;CL:0002057,6.33e-16,42;CL:0000839,3.67e-15,66;CL:0000557,2.28e-14,67;CL:0002087,3.08e-13,115;CL:0000738,9.17e-13,136;CL:0002320,1.04e-12,361;CL:0002031,1.26e-11,120;CL:0000134,3.25e-11,354;CL:0000048,3.37e-10,427;CL:0000723,2.19e-09,433;CL:0000219,2.97e-09,386;CL:0000034,2.41e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.18e-15!112;UBERON:0002405!3.78e-15!115;UBERON:0002390!7.88e-15!102;UBERON:0003061!7.88e-15!102;UBERON:0002371!6.82e-13!80;UBERON:0002384!5.74e-12!375;UBERON:0004765!8.06e-11!101;UBERON:0001434!8.06e-11!101;UBERON:0001474!8.58e-11!86;UBERON:0002204!2.54e-09!167;UBERON:0003081!2.13e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.58e-16,108;UBERON:0002390,1.52e-15,98;UBERON:0003061,1.52e-15,98;UBERON:0002405,4.79e-15,93;UBERON:0002371,1.15e-13,76;UBERON:0004765,8.28e-13,90;UBERON:0001434,5.60e-12,100;UBERON:0002384,6.53e-12,371;UBERON:0001474,2.15e-11,82;UBERON:0002204,2.32e-10,167;UBERON:0003081,1.62e-07,203 | |||
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| |||
|short_description=p1@IFI35 | |||
}} |
Latest revision as of 17:03, 24 September 2015
Short description: | p1@IFI35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFI35_5end |
Coexpression cluster: | C2138_Smooth_CD14_mesothelioma_Hair_meningioma_normal_mesenchymal |
Association with transcript: | 0bp_to_ENST00000246911, ENST00000536969, uc010whj.1_5end |
EntrezGene: | IFI35 |
HGNC: | 5399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.30e-18 | 48 |
phagocyte | 7.30e-18 | 48 |
monopoietic cell | 7.77e-18 | 59 |
monocyte | 7.77e-18 | 59 |
monoblast | 7.77e-18 | 59 |
promonocyte | 7.77e-18 | 59 |
myeloid leukocyte | 5.72e-17 | 72 |
macrophage dendritic cell progenitor | 1.33e-16 | 61 |
classical monocyte | 6.33e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.33e-16 | 42 |
myeloid lineage restricted progenitor cell | 3.67e-15 | 66 |
granulocyte monocyte progenitor cell | 2.28e-14 | 67 |
nongranular leukocyte | 3.08e-13 | 115 |
leukocyte | 9.17e-13 | 136 |
connective tissue cell | 1.04e-12 | 361 |
hematopoietic lineage restricted progenitor cell | 1.26e-11 | 120 |
mesenchymal cell | 3.25e-11 | 354 |
multi fate stem cell | 3.37e-10 | 427 |
somatic stem cell | 2.19e-09 | 433 |
motile cell | 2.97e-09 | 386 |
stem cell | 2.41e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.58e-16 | 108 |
hematopoietic system | 1.52e-15 | 98 |
blood island | 1.52e-15 | 98 |
immune system | 4.79e-15 | 93 |
bone marrow | 1.15e-13 | 76 |
skeletal element | 8.28e-13 | 90 |
skeletal system | 5.60e-12 | 100 |
connective tissue | 6.53e-12 | 371 |
bone element | 2.15e-11 | 82 |
musculoskeletal system | 2.32e-10 | 167 |
lateral plate mesoderm | 1.62e-07 | 203 |