FFCP PHASE1:Hg19::chr8:55014018..55014073,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:55014018..55014073,-
|short_description=p3@LYPLA1
|description=CAGE_peak_3_at_LYPLA1_5end
|association_with_transcript=-14bp_to_ENST00000519272_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10434 | |EntrezGene=10434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6737 | |HGNC=6737 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000519272_5end | |||
|cluster_id=chr8:55014018..55014073,- | |||
|description=CAGE_peak_3_at_LYPLA1_5end | |||
|id=chr8:55014018..55014073,- | |||
|ontology_enrichment_celltype=CL:0000012!2.05e-15!682;CL:0000548!6.72e-15!679;CL:0000004!6.72e-15!679;CL:0000255!6.72e-15!679;CL:0002139!6.80e-14!24;CL:0000071!8.03e-12!18;CL:0002546!8.03e-12!18;CL:0002321!3.49e-10!248;CL:0000066!7.20e-10!254;CL:0000144!7.80e-10!625;CL:0000220!1.26e-09!246;CL:0000115!6.72e-09!35;CL:0000003!1.28e-08!722;CL:0000213!3.47e-07!57;CL:0000215!3.47e-07!57;CL:0000222!4.09e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.10e-22;24!CL:0000071;2.24e-19;18!CL:0000115;2.08e-12;36!CL:1000413;2.09e-10;9!CL:0002544;2.46e-08;6!CL:0002543;6.81e-08;6!CL:0000213;1.45e-07;58!CL:0000215;1.45e-07;58!CL:0002078;2.56e-07;45!CL:0002322;4.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.09e-22,24;CL:0000071,2.89e-20,18;CL:0002546,2.89e-20,18;CL:0000115,5.71e-15,36;CL:0000213,7.68e-12,58;CL:0000215,7.68e-12,58;CL:1000413,6.66e-11,9;CL:0002078,2.39e-10,45;CL:0000066,8.66e-09,253;CL:0002321,1.74e-08,250;CL:0002544,2.00e-08,6;CL:0002543,4.80e-08,6;CL:0000222,8.90e-08,121;CL:0002322,5.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.24e-19;18 | |||
|ontology_enrichment_disease=DOID:162!1.04e-14!235;DOID:14566!1.58e-14!239;DOID:2531!5.67e-10!51;DOID:0060083!5.67e-10!51;DOID:8692!2.43e-08!31;DOID:0050686!6.12e-08!137;DOID:1240!1.15e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.53e-07;51!DOID:0060083;4.53e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.78e-11,51;DOID:0060083,7.78e-11,51;DOID:162,5.58e-09,235;DOID:14566,2.16e-08,239;DOID:1240,7.94e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.03e-12!18;UBERON:0004638!8.03e-12!18;UBERON:0004852!8.03e-12!18;UBERON:0002049!3.02e-10!79;UBERON:0007798!3.02e-10!79;UBERON:0000055!1.89e-09!69;UBERON:0001981!2.03e-08!60;UBERON:0007500!2.03e-08!60;UBERON:0004537!2.03e-08!60;UBERON:0006965!2.03e-08!60;UBERON:0000487!4.94e-08!22;UBERON:0001637!4.27e-07!42;UBERON:0003509!4.27e-07!42;UBERON:0004572!4.27e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.24e-19;18!UBERON:0001986;2.24e-19;18!UBERON:0004852;2.24e-19;18!UBERON:0000487;1.08e-14;22!UBERON:0006914;3.40e-12;25!UBERON:0000490;3.80e-12;33!UBERON:0003915;2.09e-10;9!UBERON:0004700;2.09e-10;9!UBERON:0001917;2.09e-10;9!UBERON:0000055;1.34e-08;65!UBERON:0001637;2.67e-08;42!UBERON:0003509;2.67e-08;42!UBERON:0004572;2.67e-08;42!UBERON:0007500;7.47e-08;56!UBERON:0001981;7.47e-08;56!UBERON:0004537;7.47e-08;56!UBERON:0002049;1.31e-07;75!UBERON:0007798;1.31e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.89e-20,18;UBERON:0001986,2.89e-20,18;UBERON:0004852,2.89e-20,18;UBERON:0000487,2.18e-15,22;UBERON:0000055,5.64e-15,68;UBERON:0002049,7.61e-15,78;UBERON:0007798,7.61e-15,78;UBERON:0007500,1.47e-13,59;UBERON:0001981,1.47e-13,59;UBERON:0004537,1.47e-13,59;UBERON:0006965,1.47e-13,59;UBERON:0006914,8.70e-13,25;UBERON:0003915,6.66e-11,9;UBERON:0004700,6.66e-11,9;UBERON:0001917,6.66e-11,9;UBERON:0004535,7.04e-11,109;UBERON:0001009,3.15e-10,112;UBERON:0001637,3.25e-10,42;UBERON:0003509,3.25e-10,42;UBERON:0004572,3.25e-10,42;UBERON:0004872,2.25e-09,83;UBERON:0003914,3.49e-07,117 | |||
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|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0.527533956456907,0,0.331397375727916,1.34465029290355,4.82155622419182,0,0.975865597581014,0.246242116153576,0.816002764977012,0,1.14494394852423,0.410623275218653,0.376627918784408,0.993374274723366,1.64201178899891,1.33808328233255,0,0,0.154816123316076,2.75826367343678,0.6024118375565,0.739508020333575,1.23947520928483,2.70121541726101,0.293600439334847,0,0,0.434021741431704,0.671746422719773,0.32389366601898,0.77272670290256,0,0.377875943688809,0,0,0.411167888021826,0.619412741790207,0.28769239232215,0.512321413058201,0,0.689491361473237,0,2.70852973188684,0.376484679085209,0.818718450173537,0.674170453335254,0.306083892370903,0.641858054152187,0,0,0.598390972864896,0,0.580418477257168,0,0,0.251248665256743,1.0429658368404,0.434377689410233,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0.44931452458598,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,2.64342657158052,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.639312809217652,0,0,0.289693037921647,0,0,1.13441780596881,0.886917589850256,0.966182642624386,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0,6.75792185046797,5.16140757063675,3.12426451446835,7.34900324501212,2.51699661725944,1.6507082516404,1.8809546988313,2.06733407335463,0.71153252537342,2.34304428935269,2.41697590265488,4.56163263431108,1.95249646038536,6.25027236587977,1.62028389576352,3.75058858793135,1.57170560838319,2.36484109014977,6.13266549863533,4.74632829784064,5.31285057398181,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,1.2333377420858,0.622422070799533,1.21239604862719,0.980771418680752,1.81628913173918,0.576175924479999,0.234321431833797,0,2.85235910772225,0.149448680551801,0.469737994575059,0.485618833104395,0.421352420106746,0.61246251376468,0.245668634623536,0.413303124703062,0,0,0,0,0.841680569770331,0.875829639103749,0.554128230968366,0.438977620880838,0,0.150238058906597,2.49550802952046,0,0,0.635795703478686,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,3.86521706326594,3.54569956768085,2.58124135850103,2.19552671033272,2.65059536642971,3.60201222895507,4.35376431064556,6.81266297364197,2.18986415445498,0,0.643240938192885,1.38134921352481,0,0,1.30137480043828,2.02301628093722,0.964044119533928,1.21323370005633,0.435758888184812,2.60997681022206,1.34831308160164,1.76599318612811,1.53898862778556,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.737930631258681,0.686271241194102,0.329250856225877,1.1240175325762,0.100528972411631,0.277765335475589,0,0,1.44331342025273,0.463721619900307,1.05667824812239,1.01056513432752,3.24089858803628,1.33177906564219,0,0,0.738651018262192,0.702012795417713,0.743155811443641,1.87467667973554,0.671928512795438,3.40260233381728,0.53735113621709,0.581267877027924,0.766765358330422,4.43396914106349,3.25779205848936,1.4512968087854,0.144119953416961,0.12624243342638,0.571481048629521,0,0,0,1.13110241973656,3.90445975197093,2.00078502841405,3.1396703616701,3.48768055066624,4.6936502925408,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0.857867961948885,0.542621605391443,0,0.65147236858747,0.710783897485092,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0.579125226670317,0.205476322550383,0.895304816199478,1.90544744788996,0.394061520403854,0,0.256686072559497,1.01637849688985,0,0.773288812777695,0.167516265334349,0,2.24702107184155,0,0.414415513436035,0.12269149171914,0,1.08506009479894,0.207970861530807,0,0.473107245101804,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0.280660094433074,0.128139149255701,0,0.482561763430822,1.48418066444991,0.771048469013278,0.355123450626254,1.39616165223476,1.03850885836724,0.929683027679674,0.362578348774867,1.80455823272956,0.184161977871793,0.68888668898764,0.546273504020151,0,0,0.847168708148562,0,0,1.26661954671451,0,0.340187410553031,1.29549549661284,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0.183138929636687,0.742585499285292,0,0,0,0.290012154876366,0.462145851343933,0.460511024178389,0.964856007391714,0.537101224341368,0.290033387828457,0.596586391912706,0.356128142586949,1.65284915360978,2.49847087574638,0,0.30347334256665,0.464845549297286,0.31481234683064,2.0911118104818,1.23213432070436,2.66153015158511,0.869932992075073,0.37064843820784,1.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| ||
|short_description=p3@LYPLA1 | |||
}} | }} |
Latest revision as of 12:26, 18 September 2015
Short description: | p3@LYPLA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LYPLA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000519272_5end |
EntrezGene: | LYPLA1 |
HGNC: | 6737 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.09e-22 | 24 |
blood vessel endothelial cell | 2.89e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.89e-20 | 18 |
endothelial cell | 5.71e-15 | 36 |
lining cell | 7.68e-12 | 58 |
barrier cell | 7.68e-12 | 58 |
endothelial cell of artery | 6.66e-11 | 9 |
meso-epithelial cell | 2.39e-10 | 45 |
epithelial cell | 8.66e-09 | 253 |
embryonic cell | 1.74e-08 | 250 |
aortic endothelial cell | 2.00e-08 | 6 |
vein endothelial cell | 4.80e-08 | 6 |
mesodermal cell | 8.90e-08 | 121 |
embryonic stem cell | 5.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.89e-20 | 18 |
endothelium | 2.89e-20 | 18 |
cardiovascular system endothelium | 2.89e-20 | 18 |
simple squamous epithelium | 2.18e-15 | 22 |
vessel | 5.64e-15 | 68 |
vasculature | 7.61e-15 | 78 |
vascular system | 7.61e-15 | 78 |
epithelial tube open at both ends | 1.47e-13 | 59 |
blood vessel | 1.47e-13 | 59 |
blood vasculature | 1.47e-13 | 59 |
vascular cord | 1.47e-13 | 59 |
squamous epithelium | 8.70e-13 | 25 |
endothelial tube | 6.66e-11 | 9 |
arterial system endothelium | 6.66e-11 | 9 |
endothelium of artery | 6.66e-11 | 9 |
cardiovascular system | 7.04e-11 | 109 |
circulatory system | 3.15e-10 | 112 |
artery | 3.25e-10 | 42 |
arterial blood vessel | 3.25e-10 | 42 |
arterial system | 3.25e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 2.25e-09 | 83 |
epithelial tube | 3.49e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.78e-11 | 51 |
immune system cancer | 7.78e-11 | 51 |
cancer | 5.58e-09 | 235 |
disease of cellular proliferation | 2.16e-08 | 239 |
leukemia | 7.94e-07 | 39 |