FFCP PHASE1:Hg19::chr1:174818388..174818392,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:174818388..174818392,- | |||
|description=CAGE_peak_at_chr1:174818388..174818392,- | |||
|id=chr1:174818388..174818392,- | |||
|ontology_enrichment_celltype=CL:0000066!2.17e-18!254;CL:0000223!1.61e-14!59;CL:0000082!2.73e-09!19;CL:0000181!4.82e-08!12;CL:0000417!4.82e-08!12;CL:0000668!4.82e-08!12;CL:0000414!4.82e-08!12;CL:0000412!4.82e-08!12;CL:0000182!4.82e-08!12;CL:0002076!7.62e-08!43;CL:0002251!9.76e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.30e-09;19!CL:0002553;4.34e-09;1!CL:0000167;1.09e-08;1!CL:0000164;1.09e-08;1!CL:0000502;1.09e-08;1!CL:0000172;1.09e-08;1!CL:0000173;1.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-11,253;CL:0000082,9.58e-10,19;CL:0002553,4.19e-09,1;CL:0000167,8.36e-09,1;CL:0000164,8.36e-09,1;CL:0000502,8.36e-09,1;CL:0000172,8.36e-09,1;CL:0000173,8.36e-09,1;CL:0002351,8.36e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.02e-15;30!UBERON:0003124;3.06e-09;1!CL:0002351;1.09e-08;1 | |||
|ontology_enrichment_disease=DOID:305!4.11e-44!106;DOID:0050687!1.78e-31!143;DOID:162!5.08e-20!235;DOID:14566!3.64e-19!239;DOID:1749!1.09e-17!14;DOID:0050615!7.51e-14!16;DOID:1324!1.45e-12!15;DOID:3119!1.42e-08!14;DOID:299!5.20e-07!25;DOID:3905!8.90e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:1324;3.19e-12;15!DOID:0050615;1.90e-11;16!DOID:4556;9.33e-11;3!DOID:305;1.19e-10;106!DOID:5662;1.09e-08;1!DOID:4430;1.09e-08;1!DOID:3905;6.76e-08;9!DOID:3908;8.65e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.10e-21,106;DOID:0050687,4.82e-17,143;DOID:1324,2.15e-12,15;DOID:0050615,1.31e-11,16;DOID:4556,7.67e-11,3;DOID:162,4.88e-10,235;DOID:14566,9.50e-10,239;DOID:4430,8.36e-09,1;DOID:5662,1.13e-08,1;DOID:3905,5.53e-08,9;DOID:3908,7.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005911!6.10e-17!82;UBERON:0004119!9.14e-15!169;UBERON:0000925!9.14e-15!169;UBERON:0006595!9.14e-15!169;UBERON:0000077!3.07e-14!130;UBERON:0004921!3.37e-14!129;UBERON:0004185!3.37e-14!129;UBERON:0001007!3.86e-14!155;UBERON:0001555!3.86e-14!155;UBERON:0007026!3.86e-14!155;UBERON:0001041!2.68e-11!98;UBERON:0004802!2.73e-09!19;UBERON:0000115!2.73e-09!19;UBERON:0002048!5.89e-09!22;UBERON:0000117!5.89e-09!22;UBERON:0000171!5.89e-09!22;UBERON:0000170!5.89e-09!22;UBERON:0005597!5.89e-09!22;UBERON:0000118!5.89e-09!22;UBERON:0005153!8.08e-09!37;UBERON:0004807!1.28e-08!28;UBERON:0003929!1.61e-08!54;UBERON:0000466!4.65e-08!126;UBERON:0000949!4.41e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.30e-09;19!UBERON:0000115;1.30e-09;19!UBERON:0002048;2.83e-08;22!UBERON:0004807;2.83e-08;22!UBERON:0000117;2.83e-08;22!UBERON:0000171;2.83e-08;22!UBERON:0000170;2.83e-08;22!UBERON:0002423;2.84e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,6.72e-11,82;UBERON:0004802,9.58e-10,19;UBERON:0000115,9.58e-10,19;UBERON:0002048,2.18e-08,22;UBERON:0000117,2.18e-08,22;UBERON:0000171,2.18e-08,22;UBERON:0000170,2.18e-08,22;UBERON:0005597,2.18e-08,22;UBERON:0000118,2.18e-08,22;UBERON:0004921,3.36e-08,118;UBERON:0004119,1.22e-07,160;UBERON:0000925,1.22e-07,160;UBERON:0006595,1.22e-07,160;UBERON:0001007,2.06e-07,145;UBERON:0001555,2.06e-07,145;UBERON:0007026,2.06e-07,145;UBERON:0009497,2.36e-07,25;UBERON:0000015,2.36e-07,25;UBERON:0002423,2.36e-07,25;UBERON:0006235,2.36e-07,25;UBERON:0004161,2.36e-07,25;UBERON:0001041,5.47e-07,87;UBERON:0005153,9.34e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.609868530647977,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0.242721043499027,0,0.568272293612826,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,3.75944466818779,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0,1.89110145414349,0.344743373241465,0,0.868124974666461,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0.153900517007594,0,0.23056390438806,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0.225595660617181,0,0.503464760927528,0.37950746544837,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0.971121518136371,0,0,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0,0.313932918407225,2.38944859545918,3.41531455235751,0,0,0.195984794828755,0.69647365264322,0,0,0,0,0,0,0,0.225980740780532,0,0,0,1.95551382734803,0,0.213452994739353,0.39961921916426,2.73771792592801,0.916292769327325,1.02956998717179,0,0.869767748958028,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.0824158583811665,0.471824806979294,1.77169466726548,0,0,0,0.160753148465019,0,0,0,0,0,0.670869375198532,0,0,1.5840050477911,1.43429871466276,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.855434189421647,0,0,0.157204305099666,0,0,1.7785046870815,0,0.638341257770182,0,0.2506898940227,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,2.20263034055821,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.588886311006154,0.943757786781923,0,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0.606965604236632,0.455324382702595,4.70122561861986,0,1.37190407549935,0,0,1.06374456795571,0,0.313972371402056,0.314231179832004,0.280272163313789,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0,0.68732060563215,0,0,0.335566295393377,0.588901401691458,1.21917924982269,0,0,0,0,0.701818390386317,1.39265542612958,0.83244063544298,1.6941912305844,0,0,0,0.218559560503957,0,0,1.64973582971138,0,0,0,0,0,0,0,1.07132363163395,0.705789743431384,0.882655033580851,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,1.09265571963696,0.760191006068622,0.815910637935854,0.26721740526556,0.827054095813604,0.250707539292375,0,0,0,0,0,0.23806443146374,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0.342233301085281,0,0.573777643141411,0,0.89543595472072,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:174818388..174818392,- | |||
}} |
Latest revision as of 00:37, 28 July 2015
Short description: | p@chr1:174818388..174818392, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:174818388..174818392, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.89e-11 | 253 |
epithelial cell of lung | 9.58e-10 | 19 |
lung fibroblast | 4.19e-09 | 1 |
peptide hormone secreting cell | 8.36e-09 | 1 |
enteroendocrine cell | 8.36e-09 | 1 |
type D enteroendocrine cell | 8.36e-09 | 1 |
somatostatin secreting cell | 8.36e-09 | 1 |
pancreatic D cell | 8.36e-09 | 1 |
progenitor cell of endocrine pancreas | 8.36e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 6.72e-11 | 82 |
respiratory tract epithelium | 9.58e-10 | 19 |
lung epithelium | 9.58e-10 | 19 |
lung | 2.18e-08 | 22 |
respiratory tube | 2.18e-08 | 22 |
respiration organ | 2.18e-08 | 22 |
pair of lungs | 2.18e-08 | 22 |
lung primordium | 2.18e-08 | 22 |
lung bud | 2.18e-08 | 22 |
subdivision of digestive tract | 3.36e-08 | 118 |
endoderm-derived structure | 1.22e-07 | 160 |
endoderm | 1.22e-07 | 160 |
presumptive endoderm | 1.22e-07 | 160 |
digestive system | 2.06e-07 | 145 |
digestive tract | 2.06e-07 | 145 |
primitive gut | 2.06e-07 | 145 |
epithelium of foregut-midgut junction | 2.36e-07 | 25 |
anatomical boundary | 2.36e-07 | 25 |
hepatobiliary system | 2.36e-07 | 25 |
foregut-midgut junction | 2.36e-07 | 25 |
septum transversum | 2.36e-07 | 25 |
foregut | 5.47e-07 | 87 |
epithelial bud | 9.34e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.10e-21 | 106 |
cell type cancer | 4.82e-17 | 143 |
lung cancer | 2.15e-12 | 15 |
respiratory system cancer | 1.31e-11 | 16 |
lung large cell carcinoma | 7.67e-11 | 3 |
cancer | 4.88e-10 | 235 |
disease of cellular proliferation | 9.50e-10 | 239 |
somatostatinoma | 8.36e-09 | 1 |
pleomorphic carcinoma | 1.13e-08 | 1 |
lung carcinoma | 5.53e-08 | 9 |
non-small cell lung carcinoma | 7.70e-07 | 5 |