FFCP PHASE1:Hg19::chr9:127269434..127269438,-: Difference between revisions
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|id=chr9:127269434..127269438,-
|short_description=p8@NR5A1
|description=CAGE_peak_8_at_NR5A1_5end
|association_with_transcript=75bp_to_ENST00000455734_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2516 | |EntrezGene=2516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7983 | |HGNC=7983 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T6F6 | |UniProt=Q5T6F6 | ||
|association_with_transcript=75bp_to_ENST00000455734_5end | |||
|cluster_id=chr9:127269434..127269438,- | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_8_at_NR5A1_5end | |||
|id=chr9:127269434..127269438,- | |||
|ontology_enrichment_celltype=CL:0000181!3.84e-14!12;CL:0000417!3.84e-14!12;CL:0000668!3.84e-14!12;CL:0000414!3.84e-14!12;CL:0000412!3.84e-14!12;CL:0000182!3.84e-14!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.76e-57;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.28e-53!3;UBERON:0004854!1.28e-53!3;UBERON:0009034!1.28e-53!3;UBERON:0002095!1.28e-53!3;UBERON:0004782!1.28e-53!3;UBERON:0003281!1.28e-53!3;UBERON:0009664!1.28e-53!3;UBERON:0002296!1.28e-53!3;UBERON:0005602!1.28e-53!3;UBERON:0001179!1.28e-53!3;UBERON:0006293!1.28e-53!3;UBERON:0005057!6.01e-25!26;UBERON:0004177!1.02e-23!7;UBERON:0000945!6.64e-21!8;UBERON:0010039!6.64e-21!8;UBERON:0004457!2.57e-14!12;UBERON:0000042!2.57e-14!12;UBERON:0005172!3.34e-12!55;UBERON:0005173!3.34e-12!55;UBERON:0002119!3.10e-11!4;UBERON:0004531!3.10e-11!4;UBERON:0002417!4.53e-11!61;UBERON:0000916!4.53e-11!61;UBERON:0002075!6.79e-10!18;UBERON:0002107!2.56e-09!19;UBERON:0006925!2.56e-09!19;UBERON:0008836!2.56e-09!19;UBERON:0003887!1.27e-08!21;UBERON:0002323!1.36e-08!46;UBERON:0000466!1.76e-08!126;UBERON:0008835!3.51e-08!22;UBERON:0003894!3.51e-08!22;UBERON:0004458!4.12e-08!49;UBERON:0009854!7.23e-08!23;UBERON:0007499!2.58e-07!25;UBERON:0009497!2.58e-07!25;UBERON:0000015!2.58e-07!25;UBERON:0002423!2.58e-07!25;UBERON:0006235!2.58e-07!25;UBERON:0004161!2.58e-07!25;UBERON:0001041!4.02e-07!98;UBERON:0009856!4.55e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.98e-131;3!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0002075;3.88e-23;18!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002390;1.84e-13;32!UBERON:0004458;8.88e-10;48!UBERON:0002553;1.47e-07;52!UBERON:0002323;1.47e-07;45!UBERON:0002193;3.42e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.98e-131,3;UBERON:0004854,8.98e-131,3;UBERON:0009034,8.98e-131,3;UBERON:0002095,8.98e-131,3;UBERON:0004782,8.98e-131,3;UBERON:0003281,8.98e-131,3;UBERON:0009664,8.98e-131,3;UBERON:0002296,8.98e-131,3;UBERON:0005602,8.98e-131,3;UBERON:0001179,8.98e-131,3;UBERON:0006293,8.98e-131,3;UBERON:0004177,4.76e-57,7;UBERON:0005057,4.76e-57,7;UBERON:0000945,3.99e-50,8;UBERON:0010039,3.99e-50,8;UBERON:0004457,5.98e-34,12;UBERON:0000042,5.98e-34,12;UBERON:0003887,5.98e-34,12;UBERON:0002075,3.88e-23,18;UBERON:0005409,1.86e-16,25;UBERON:0000077,6.74e-15,29;UBERON:0002323,7.07e-10,46;UBERON:0004458,2.38e-09,49;UBERON:0005172,1.34e-08,54;UBERON:0003886,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0002553,9.44e-08,61;UBERON:0004923,2.96e-07,66 | |||
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|short_description=p8@NR5A1 | |||
}} | }} |
Latest revision as of 00:48, 25 September 2015
Short description: | p8@NR5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NR5A1_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | 75bp_to_ENST00000455734_5end |
EntrezGene: | NR5A1 |
HGNC: | 7983 |
UniProt: | Q5T6F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 8.98e-131 | 3 |
gastrointestinal system mesentery | 8.98e-131 | 3 |
stomach region | 8.98e-131 | 3 |
mesentery | 8.98e-131 | 3 |
gastrointestinal system serosa | 8.98e-131 | 3 |
mesentery of stomach | 8.98e-131 | 3 |
gut mesentery | 8.98e-131 | 3 |
dorsal mesentery | 8.98e-131 | 3 |
dorsal mesogastrium | 8.98e-131 | 3 |
peritoneal cavity | 8.98e-131 | 3 |
spleen primordium | 8.98e-131 | 3 |
hemopoietic organ | 4.76e-57 | 7 |
immune organ | 4.76e-57 | 7 |
stomach | 3.99e-50 | 8 |
food storage organ | 3.99e-50 | 8 |
cavity lining | 5.98e-34 | 12 |
serous membrane | 5.98e-34 | 12 |
intraembryonic coelom | 5.98e-34 | 12 |
viscus | 3.88e-23 | 18 |
gastrointestinal system | 1.86e-16 | 25 |
mixed endoderm/mesoderm-derived structure | 6.74e-15 | 29 |
body cavity | 7.07e-10 | 46 |
body cavity or lining | 2.38e-09 | 49 |
abdomen element | 1.34e-08 | 54 |
body cavity precursor | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
anatomical cavity | 9.44e-08 | 61 |
organ component layer | 2.96e-07 | 66 |