FFCP PHASE1:Hg19::chr21:47424604..47424616,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:47424604..47424616,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47424604..47424616,+ | |||
|id=chr21:47424604..47424616,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.19e-36!180;CL:0000057!3.92e-22!75;CL:0000680!1.68e-14!57;CL:0000056!1.68e-14!57;CL:0000355!1.68e-14!57;CL:0000183!5.49e-14!59;CL:0000393!6.82e-14!60;CL:0000211!6.82e-14!60;CL:0000187!1.30e-13!54;CL:0000048!4.71e-11!430;CL:0002620!9.07e-11!23;CL:0000034!1.25e-10!444;CL:0000192!1.31e-10!42;CL:0000514!1.31e-10!42;CL:0000723!2.98e-10!436;CL:0000499!1.54e-08!27;CL:0002570!2.71e-08!8;CL:0000359!7.43e-08!32;CL:0000327!6.72e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002570;6.37e-16;8!CL:0002620;1.32e-09;23!CL:0000499;4.18e-09;28!CL:0000134;1.29e-07;55!CL:0000135;1.65e-07;3!CL:0000388;1.65e-07;3!CL:0002320;2.39e-07;188!CL:0000723;2.61e-07;61!CL:0000057;5.99e-07;73!CL:0002334;7.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.81e-19,76;CL:0002570,4.27e-16,8;CL:0000048,6.61e-14,427;CL:0000723,2.08e-13,433;CL:0000034,9.12e-13,441;CL:0002320,1.50e-12,361;CL:0002620,5.76e-10,23;CL:0000134,3.66e-09,354;CL:0000499,4.44e-09,28;CL:0000135,1.46e-07,3;CL:0000388,1.46e-07,3;CL:0000219,2.34e-07,386;CL:0002334,5.12e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.23e-10;5!DOID:450;9.23e-10;5!DOID:66;9.23e-10;5!DOID:423;9.23e-10;5!DOID:0080000;9.23e-10;5!DOID:11722;9.23e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.17e-10,5;DOID:450,3.17e-10,5;DOID:66,3.17e-10,5;DOID:423,3.17e-10,5;DOID:0080000,3.17e-10,5;DOID:11722,3.17e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.70e-14!83;UBERON:0002329!2.70e-14!83;UBERON:0003077!2.70e-14!83;UBERON:0003059!2.70e-14!83;UBERON:0007282!2.70e-14!83;UBERON:0009618!2.70e-14!83;UBERON:0007285!2.70e-14!83;UBERON:0004290!4.80e-14!70;UBERON:0002385!5.94e-14!63;UBERON:0001015!5.94e-14!63;UBERON:0000383!5.94e-14!63;UBERON:0001134!1.27e-13!61;UBERON:0002036!1.27e-13!61;UBERON:0003082!1.27e-13!61;UBERON:0000486!7.02e-13!82;UBERON:0005256!1.65e-09!143;UBERON:0003102!1.83e-09!95;UBERON:0000475!1.07e-08!365;UBERON:0002199!4.91e-08!45;UBERON:0002416!4.91e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.33e-10;14!UBERON:0004905;7.77e-10;8!UBERON:0000982;7.77e-10;8!UBERON:0004770;7.77e-10;8!UBERON:0002199;1.02e-08;46!UBERON:0002416;1.02e-08;46!UBERON:0011135;1.30e-08;5!UBERON:0002216;1.30e-08;5!UBERON:0011134;1.30e-08;5!UBERON:0002209;1.30e-08;5!UBERON:0002213;1.30e-08;5!UBERON:0007844;1.30e-08;5!UBERON:0011138;1.30e-08;5!UBERON:0001130;1.30e-08;5!UBERON:0001066;1.30e-08;5!UBERON:0001468;1.30e-08;5!UBERON:0002384;2.76e-08;198!UBERON:0007846;1.65e-07;3!UBERON:0000043;1.65e-07;3!UBERON:0007845;1.65e-07;3!UBERON:0002097;7.95e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.79e-12,46;UBERON:0002416,2.79e-12,46;UBERON:0002384,1.08e-11,371;UBERON:0001013,1.41e-10,14;UBERON:0004905,4.64e-10,8;UBERON:0000982,4.64e-10,8;UBERON:0004770,4.64e-10,8;UBERON:0002097,7.21e-10,41;UBERON:0003102,1.57e-09,99;UBERON:0011135,1.41e-08,5;UBERON:0002216,1.41e-08,5;UBERON:0011134,1.41e-08,5;UBERON:0002209,1.41e-08,5;UBERON:0002213,1.41e-08,5;UBERON:0005856,1.41e-08,5;UBERON:0005866,1.41e-08,5;UBERON:0005863,1.41e-08,5;UBERON:0007844,1.41e-08,5;UBERON:0011138,1.41e-08,5;UBERON:0001130,1.41e-08,5;UBERON:0001066,1.41e-08,5;UBERON:0001468,1.41e-08,5;UBERON:0007846,1.46e-07,3;UBERON:0000043,1.46e-07,3;UBERON:0007845,1.46e-07,3 | |||
|phase1_expression=0.363356758541113,2.35510576280081,0.704772020479856,1.0007329835313,2.23480547213644,0,0,0.631719873426831,1.82829939739887,0,0.697801167972428,0,0,1.11389717664042,1.32558950291166,6.05092631806598,1.20538905604795,2.92124036154949,0.975865597581014,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,4.3372698286148,2.00535164254356,0.724232594804119,3.9764297352555,0.973269740605272,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.05927344650575,5.16305917347865,0.709336764396714,0,0,0,0,0,0.490385709340376,1.51357427644931,2.30470369792,0,0,0,1.49448680551801,0.352303495931295,0.809364721840658,0.421352420106746,1.02077085627447,0.491337269247072,0.413303124703062,1.18800285728205,1.97813543422845,4.55080680969013,1.43723628363248,0.336672227908132,0.375355559615893,0.277064115484183,0,0,0.600952235626387,0.113432183160021,1.61450672119976,2.77624605464138,2.96704661623387,3.30100205692843,1.75189299705346,4.12224864073007,0.930584281657949,2.53164498361899,0.779496041289589,1.51460264546469,1.47279837827679,4.0411514204703,2.4850671476163,0.604512589365842,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0.252320850875628,0,0,11.5783368874719,0,2.3218396401599,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,5.88034845542168,0,0,0,0,0,0,0,0,0,0,0.977424915930974,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,1.1734125731352,0.517086863031111,3.57656445851882,3.381211010224,0.26593811658487,0,0.257207374262142,0,1.8649552531127,1.14382394926518,2.17048642156577,0,1.30294473717494,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,1.19812427745791,3.44585807502342,0,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.96306386750624,1.50051156317903,1.08506009479894,1.66376689224646,2.3195768543631,0.946214490203608,0.468565659970853,0,0,1.03473071292505,1.32845119707087,0.184369168541703,1.12948698808508,1.37060810223918,3.43143423810856,0,0,0,0,0,0.604780586659361,0.744323423456331,0.920771839728375,1.40330047216537,1.28139149255701,0,0.965123526861645,0,2.62156479464514,5.14929003408069,1.47828880824856,1.55776328755086,2.5566283261191,0,0.200506470303285,0,0.68888668898764,2.00300284807389,1.31124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.165018999841176,0,1.30012049207304,0,1.16004861950546,1.23238893691716,1.38153307253517,0.964856007391714,1.28904293841928,0.870100163485371,0.255679882248303,1.86967274858148,0,0,0,0,0.464845549297286,6.2962469366128,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.953150969619124,0.767693373934002,0.855877976067841,0.636406495851874,0.78494864019923,0.359744915166629,1.09814811894422,0.706874414074119,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,1.22849920267187,2.2624869112594,2.26016233240486,1.10273068709225,0,0.876901770507525,1.15755106853338,1.31178950409327,0,0,0.281695602532241,0.286822704408103,0.392996164052485,0.7133421029625,0,1.47775344708365,1.97576935775941,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,2.79935628895627,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0.384751292518985,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0,0,2.38944859545918,0.853828638089378,0,0,0,0,0,0.687944129886466,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0.803765742325096,0.550157746388935,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,1.94031243752936,3.50569964770837,5.54805861502613,1.13641803165053,2.51567901752575,0.889811221596536,0.686520205190771,1.20984739010591,0.621748802331122,0.295710299979268,0.796483835818512,0.449803112163605,0.621051827505038,0.829412415681711,1.86089200190596,2.60872530905867,1.20206087197775,0,0,1.45478927362048,0.751873899297419,0.928067519756987,1.59238355479446,0,5.15093557774189,3.36749488765919,0,0,0.643324774124777,0.260994291965212,0,0,0,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0,0,0,0,0,0,0,1.27201740261367,0,0,3.87943538059752,2.7562092961788,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.60511520611056,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0.546974809018219,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0.111231401892069,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0.4226557275834,0.849635573439084,0.0939839179798536,0,0,0,0,0,1.46067277649303,0,0,0.315543124386369,0,0.436350690340377,0,4.83593523616777,5.54610754357702,3.8936390591141,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0,0.435433495793923,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p@chr21:47424604..47424616,+ | |||
}} |
Latest revision as of 18:45, 28 July 2015
Short description: | p@chr21:47424604..47424616, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47424604..47424616, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.81e-19 | 76 |
mesenchymal stem cell of adipose | 4.27e-16 | 8 |
multi fate stem cell | 6.61e-14 | 427 |
somatic stem cell | 2.08e-13 | 433 |
stem cell | 9.12e-13 | 441 |
connective tissue cell | 1.50e-12 | 361 |
skin fibroblast | 5.76e-10 | 23 |
mesenchymal cell | 3.66e-09 | 354 |
stromal cell | 4.44e-09 | 28 |
fibrocyte | 1.46e-07 | 3 |
tendon cell | 1.46e-07 | 3 |
motile cell | 2.34e-07 | 386 |
preadipocyte | 5.12e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 2.79e-12 | 46 |
integumental system | 2.79e-12 | 46 |
connective tissue | 1.08e-11 | 371 |
adipose tissue | 1.41e-10 | 14 |
articulation | 4.64e-10 | 8 |
skeletal joint | 4.64e-10 | 8 |
articular system | 4.64e-10 | 8 |
skin of body | 7.21e-10 | 41 |
surface structure | 1.57e-09 | 99 |
intervertebral cartilage | 1.41e-08 | 5 |
symphysis | 1.41e-08 | 5 |
nonsynovial joint | 1.41e-08 | 5 |
fibrous joint | 1.41e-08 | 5 |
cartilaginous joint | 1.41e-08 | 5 |
developing mesenchymal condensation | 1.41e-08 | 5 |
pre-cartilage condensation | 1.41e-08 | 5 |
cartilaginous condensation | 1.41e-08 | 5 |
cartilage element | 1.41e-08 | 5 |
post-cranial axial skeletal system | 1.41e-08 | 5 |
vertebral column | 1.41e-08 | 5 |
intervertebral disk | 1.41e-08 | 5 |
intervertebral joint | 1.41e-08 | 5 |
dense regular connective tissue | 1.46e-07 | 3 |
tendon | 1.46e-07 | 3 |
regular connective tissue | 1.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.17e-10 | 5 |
myotonic disease | 3.17e-10 | 5 |
muscle tissue disease | 3.17e-10 | 5 |
myopathy | 3.17e-10 | 5 |
muscular disease | 3.17e-10 | 5 |
myotonic dystrophy | 3.17e-10 | 5 |