FFCP PHASE1:Hg19::chr22:18593474..18593485,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12410 | |||
|TSSclassifier=strong | |||
|UniProt=B3KPW9,Q9NY65 | |||
|association_with_transcript=21bp_to_ENST00000316027,NM_001193414,NM_018943_5end | |||
|cluster_id=chr22:18593474..18593485,+ | |||
|description=CAGE_peak_8_at_TUBA8_5end | |||
|id=chr22:18593474..18593485,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.76e-08!5;CL:0000457!1.76e-08!5;CL:0002191!1.76e-08!5;CL:0000097!1.76e-08!5;CL:0000831!1.76e-08!5;CL:0002028!1.76e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.38e-23;5!CL:0000163;3.25e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.97e-23,5;CL:0002028,1.97e-23,5;CL:0000163,3.95e-13,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.88e-11;3!UBERON:0010227;5.92e-09;1!UBERON:0010226;5.92e-09;1!UBERON:0006222;1.47e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.31e-09;1!DOID:0050177;3.31e-09;1!DOID:0050427;3.31e-09;1!DOID:178;1.47e-08;1!DOID:326;1.47e-08;1!DOID:3978;1.47e-08;1!DOID:3394;1.47e-08;1!DOID:5844;1.47e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.06e-09,1;DOID:0050177,3.06e-09,1;DOID:0050427,3.06e-09,1;DOID:178,1.22e-08,1;DOID:326,1.22e-08,1;DOID:3978,1.22e-08,1;DOID:3394,1.22e-08,1;DOID:5844,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-44!115;UBERON:0000178!1.65e-15!15;UBERON:0000179!1.65e-15!15;UBERON:0000463!1.65e-15!15;UBERON:0001049!2.47e-13!57;UBERON:0005068!2.47e-13!57;UBERON:0006241!2.47e-13!57;UBERON:0007135!2.47e-13!57;UBERON:0002616!1.35e-12!59;UBERON:0000955!4.75e-12!69;UBERON:0006238!4.75e-12!69;UBERON:0003075!1.92e-10!86;UBERON:0007284!1.92e-10!86;UBERON:0002346!1.47e-09!90;UBERON:0001017!1.71e-09!82;UBERON:0005743!2.78e-09!86;UBERON:0002020!4.63e-09!34;UBERON:0003528!4.63e-09!34;UBERON:0001869!9.36e-09!32;UBERON:0003080!1.19e-08!42;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0001893!5.48e-08!34;UBERON:0002780!6.80e-08!41;UBERON:0001890!6.80e-08!41;UBERON:0006240!6.80e-08!41;UBERON:0002298!7.48e-08!8;UBERON:0004732!1.34e-07!13;UBERON:0000073!1.35e-07!94;UBERON:0001016!1.35e-07!94;UBERON:0002619!2.47e-07!22;UBERON:0002791!3.38e-07!33;UBERON:0001950!5.45e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-23;15!UBERON:0000179;1.29e-23;15!UBERON:0000463;1.29e-23;15!UBERON:0005090;2.07e-15;2!UBERON:0001630;2.07e-15;2!UBERON:0004151;4.21e-11;3!UBERON:0002390;1.52e-10;32!UBERON:0002084;5.92e-09;1!UBERON:0002079;5.92e-09;1!UBERON:0002082;5.92e-09;1!UBERON:0001389;1.47e-08;1!UBERON:0000026;1.47e-08;1!UBERON:0008784;1.47e-08;1!UBERON:0006058;1.47e-08;1!UBERON:0002426;1.47e-08;1!UBERON:0003831;1.47e-08;1!UBERON:0003898;1.47e-08;1!UBERON:0004830;1.47e-08;1!UBERON:0003663;1.47e-08;1!UBERON:0004256;1.47e-08;1!UBERON:0004708;1.47e-08;1!UBERON:0002101;1.47e-08;1!UBERON:0004709;1.47e-08;1!UBERON:0003830;1.47e-08;1!UBERON:0005175;1.47e-08;1!UBERON:0002529;1.47e-08;1!UBERON:0010538;1.47e-08;1!UBERON:0003661;1.47e-08;1!UBERON:0010890;1.47e-08;1!UBERON:0002471;1.47e-08;1!UBERON:0001774;1.47e-08;1!UBERON:0001383;1.47e-08;1!UBERON:0010758;1.47e-08;1!UBERON:0010707;1.47e-08;1!UBERON:0001103;1.47e-08;1!UBERON:0000978;1.47e-08;1!UBERON:0002103;1.47e-08;1!UBERON:0001665;1.47e-08;1!UBERON:0003823;1.47e-08;1!UBERON:0000154;1.47e-08;1!UBERON:0010709;1.47e-08;1!UBERON:0001134;1.20e-07;16!UBERON:0002036;1.20e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-23,15;UBERON:0000179,1.91e-23,15;UBERON:0000463,1.91e-23,15;UBERON:0005090,1.06e-15,2;UBERON:0001630,1.06e-15,2;UBERON:0004151,2.96e-11,3;UBERON:0007023,3.01e-10,114;UBERON:0002079,4.19e-09,1;UBERON:0002084,4.89e-09,1;UBERON:0002082,4.89e-09,1;UBERON:0010226,4.89e-09,1;UBERON:0001009,7.15e-09,112;UBERON:0005418,9.74e-09,1;UBERON:0001389,9.74e-09,1;UBERON:0000026,9.74e-09,1;UBERON:0008784,9.74e-09,1;UBERON:0006058,9.74e-09,1;UBERON:0003663,9.74e-09,1;UBERON:0004256,9.74e-09,1;UBERON:0004708,9.74e-09,1;UBERON:0002101,9.74e-09,1;UBERON:0004709,9.74e-09,1;UBERON:0002529,9.74e-09,1;UBERON:0010538,9.74e-09,1;UBERON:0003661,9.74e-09,1;UBERON:0010890,9.74e-09,1;UBERON:0002471,9.74e-09,1;UBERON:0001383,9.74e-09,1;UBERON:0004357,9.74e-09,1;UBERON:0004347,9.74e-09,1;UBERON:0005420,9.74e-09,1;UBERON:0005732,9.74e-09,1;UBERON:0010758,9.74e-09,1;UBERON:0010707,9.74e-09,1;UBERON:0000978,9.74e-09,1;UBERON:0002103,9.74e-09,1;UBERON:0001665,9.74e-09,1;UBERON:0003823,9.74e-09,1;UBERON:0000154,9.74e-09,1;UBERON:0010709,9.74e-09,1;UBERON:0005733,9.74e-09,1;UBERON:0005730,9.74e-09,1;UBERON:0002426,1.13e-08,1;UBERON:0003831,1.13e-08,1;UBERON:0003898,1.13e-08,1;UBERON:0004830,1.13e-08,1;UBERON:0003830,1.13e-08,1;UBERON:0005175,1.13e-08,1;UBERON:0001774,1.13e-08,1;UBERON:0001103,1.13e-08,1;UBERON:0010084,1.13e-08,1;UBERON:0002390,4.27e-07,98;UBERON:0003061,4.27e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0.61130724598361,0.656804715599566,0.314843125254717,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0.398873881556595,0,0,0,2.38514888840046,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.563057402416611,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.32072651019839,2.69526550203004,1.15295962733569,1.2624243342638,0.063497894292169,0.763976851116555,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,2.27858874869665,2.1440859791201,0.822724546172388,0.648473311192717,2.16012574895246,2.37937552888281,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,1.36940807419915,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.835218521685727,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,3.31737779793674,2.36438095162838,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,2.10058696209055,1.67075119208729,0,1.60515529459758,1.1713222286267,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.379864775735272,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,0.717873024576814,1.59743200399193,0.429226048136571,2.90122894674434,0.470284307407084,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.104909176269996,0,0,0,2.85878130549347,2.64836788146173,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,0.52893040697076,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,1.22538230705385,0.327872630709804,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0.454947352624943,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.449604575675217,0,0.319267718114302,0.205116364240755,0,0.829887029570615,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.742913430802341,0,0,0.951237152908602,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,0,0.230467975111559,0,0.339848664884159,0.789273282754189,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,1.94228651156368,2.46390736454993,3.4794432940146,0,0,0,0.118920090777569,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.535928260312357,0,0,0.426467963801962,0.476128862927481,0,0,0,0.318235791390825,0.606351566874658,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0.665756774185513,0,3.8468219076388 | |||
|short_description=p8@TUBA8 | |||
}} |
Latest revision as of 02:08, 19 September 2015
Short description: | p8@TUBA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TUBA8_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000316027, NM_001193414, NM_018943_5end |
EntrezGene: | TUBA8 |
HGNC: | 12410 |
UniProt: | B3KPW9Q9NY65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.97e-23 | 5 |
basophil mast progenitor cell | 1.97e-23 | 5 |
endocrine cell | 3.95e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.06e-09 | 1 |
monogenic disease | 3.06e-09 | 1 |
xeroderma pigmentosum | 3.06e-09 | 1 |
vascular disease | 1.22e-08 | 1 |
ischemia | 1.22e-08 | 1 |
extrinsic cardiomyopathy | 1.22e-08 | 1 |
myocardial ischemia | 1.22e-08 | 1 |
myocardial infarction | 1.22e-08 | 1 |