FFCP PHASE1:Hg19::chr9:21974943..21974946,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:21974943..21974946,-
|short_description=p25@CDKN2A
|description=CAGE_peak_25_at_CDKN2A_5end
|association_with_transcript=-78bp_to_ENST00000498124_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=A5X2G7 | |UniProt=A5X2G7 | ||
|association_with_transcript=-78bp_to_ENST00000498124_5end | |||
|cluster_id=chr9:21974943..21974946,- | |||
|description=CAGE_peak_25_at_CDKN2A_5end | |||
|id=chr9:21974943..21974946,- | |||
|ontology_enrichment_celltype=CL:0000066!3.63e-08!254;CL:0000359!6.46e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002568;8.55e-14;1!CL:0000306;2.07e-13;4!CL:0002222;2.07e-13;4!CL:0002224;2.07e-13;4!CL:0002561;1.54e-07;2!CL:0002596;1.54e-07;2!CL:0002593;1.54e-07;2!CL:0002535;1.54e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,3.98e-14,1;CL:0000306,2.51e-13,4;CL:0002222,2.51e-13,4;CL:0002224,2.51e-13,4;CL:0002596,1.36e-07,2;CL:0002561,1.45e-07,2;CL:0002535,1.99e-07,2;CL:0002593,2.25e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.01e-10!106;DOID:0050687!2.98e-08!143;DOID:14566!1.37e-07!239;DOID:162!5.94e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.45e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.47e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.85e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.07e-13;4!UBERON:0005389;2.07e-13;4!UBERON:0000484;2.07e-13;4!UBERON:0000965;2.07e-13;4!UBERON:0001803;2.07e-13;4!UBERON:0000002;3.01e-09;6!UBERON:0001560;3.01e-09;6!UBERON:0006955;1.54e-07;2!UBERON:0005933;1.54e-07;2!UBERON:0004801;1.54e-07;2!UBERON:0005942;1.54e-07;2!UBERON:0002456;1.54e-07;2!UBERON:0005396;1.54e-07;2!UBERON:0005932;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,2.51e-13,4;UBERON:0005389,2.51e-13,4;UBERON:0000484,2.51e-13,4;UBERON:0002546,2.51e-13,4;UBERON:0000965,2.51e-13,4;UBERON:0001803,2.51e-13,4;UBERON:0003073,2.51e-13,4;UBERON:0005426,2.51e-13,4;UBERON:0000002,3.02e-09,6;UBERON:0001560,3.02e-09,6;UBERON:0005396,1.36e-07,2;UBERON:0005933,1.45e-07,2;UBERON:0005942,1.45e-07,2;UBERON:0005932,1.45e-07,2;UBERON:0006955,1.99e-07,2;UBERON:0004801,1.99e-07,2;UBERON:0002456,2.25e-07,2;UBERON:0000076,4.15e-07,8 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0.132529768321485,0,0,0,0,0,0,0,0,1.44375896333917,0.591534000199219,0.505754070234305,0,0.772057809126758,0.653638332277218,0,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80980402060889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,1.00253235151642,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0,0,1.56989728039846,0,0,0,0.606547444719948,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,1.42037263873893,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0.689486746482929,0.583209226766509,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0.622129148383483,0,0,0,0,0.284609546029793,0,0,0,1.13176968554523,0,0,0.774050650312681,0.65780385377567,0.985385484638511,0,0,0,0,0.993573058514948,0,0,0,0,0.19980960958213,0,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950403028674658,0,1.91915197319445,0,0,0,0.542999601753713,0.864221491201268,0,1.19730191562487,1.80603545648546,0.170388021785422,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0.198950775161368,0,0.45178432815584,0,1.35866559210006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89543595472072,1.06727345877715,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p25@CDKN2A | |||
}} | }} |
Latest revision as of 23:14, 16 September 2015
Short description: | p25@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CDKN2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000498124_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | A5X2G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 3.98e-14 | 1 |
crystallin accumulating cell | 2.51e-13 | 4 |
vertebrate lens cell | 2.51e-13 | 4 |
lens epithelial cell | 2.51e-13 | 4 |
smooth muscle cell of the carotid artery | 1.36e-07 | 2 |
outer root sheath cell | 1.45e-07 | 2 |
epithelial cell of cervix | 1.99e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 2.51e-13 | 4 |
transparent eye structure | 2.51e-13 | 4 |
simple cuboidal epithelium | 2.51e-13 | 4 |
cranial placode | 2.51e-13 | 4 |
lens of camera-type eye | 2.51e-13 | 4 |
epithelium of lens | 2.51e-13 | 4 |
lens placode | 2.51e-13 | 4 |
lens vesicle | 2.51e-13 | 4 |
uterine cervix | 3.02e-09 | 6 |
neck of organ | 3.02e-09 | 6 |
carotid artery segment | 1.36e-07 | 2 |
hair root sheath | 1.45e-07 | 2 |
hair outer root sheath | 1.45e-07 | 2 |
bulb of hair follicle | 1.45e-07 | 2 |
uterine epithelium | 1.99e-07 | 2 |
cervix epithelium | 1.99e-07 | 2 |
internal thoracic artery | 2.25e-07 | 2 |
external ectoderm | 4.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.47e-11 | 5 |