FFCP PHASE1:Hg19::chr2:85136237..85136241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:85136237..85136241,+ | |||
|description=CAGE_peak_at_chr2:85136237..85136241,+ | |||
|id=chr2:85136237..85136241,+ | |||
|ontology_enrichment_celltype=CL:0002032!3.59e-09!165;CL:0000837!3.59e-09!165;CL:0002087!9.69e-09!119;CL:0002031!1.48e-08!124;CL:0000738!3.25e-08!140;CL:0000037!3.37e-08!172;CL:0000566!3.37e-08!172;CL:0000988!2.34e-07!182;CL:0000542!4.42e-07!53;CL:0000051!4.42e-07!53;CL:0000860!7.64e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.49e-23;1!CL:0000911;1.49e-23;1!CL:0000814;1.49e-23;1!CL:1001319;3.67e-23;1!CL:1000600;3.67e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.67e-23,1;CL:0000914,1.67e-23,1;CL:0000911,1.67e-23,1;CL:0000814,1.67e-23,1;CL:0002042,1.67e-23,1;CL:0002039,1.67e-23,1;CL:0002040,1.67e-23,1;CL:0002041,1.67e-23,1;CL:1001319,3.28e-23,1;CL:1000600,3.28e-23,1;CL:0000893,1.85e-12,2;CL:0002489,1.85e-12,2;CL:0000809,1.85e-12,2;CL:0000808,1.85e-12,2;CL:0000894,1.85e-12,2;CL:0000806,1.85e-12,2;CL:0000807,1.85e-12,2;CL:0000805,1.85e-12,2;CL:0002425,1.85e-12,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.75e-12;2 | |||
|ontology_enrichment_disease=DOID:162!1.47e-14!235;DOID:14566!2.55e-14!239;DOID:0050687!4.47e-12!143;DOID:305!3.27e-09!106;DOID:1749!1.52e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4231;2.74e-12;2!DOID:1909;2.74e-12;2!DOID:1907;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,2.32e-12,2;DOID:1907,2.32e-12,2;DOID:1909,3.62e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.67e-23;1!UBERON:0001256;3.67e-23;1!UBERON:0001259;3.67e-23;1!UBERON:0001255;2.74e-12;2!UBERON:0001556;2.74e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.28e-23,1;UBERON:0001256,3.28e-23,1;UBERON:0001259,3.28e-23,1;UBERON:0001255,2.59e-12,2;UBERON:0001556,2.59e-12,2;UBERON:0009722,4.80e-09,11;UBERON:0007690,4.80e-09,11;UBERON:0002370,7.27e-07,4;UBERON:0005058,7.27e-07,4;UBERON:0009113,7.27e-07,4;UBERON:0003295,7.27e-07,4;UBERON:0005562,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,1.22433556948361,0,0,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0.257640540045629,0.18611685633159,0.843881661206331,0,0,0.0920498986422993,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,2.35378802386407,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.28853842595289,0.213425530045242,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0,0,2.50634477090067,3.55512733383367,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0.18714054040822,0,0,0.445773537109913,0.284136146806413,0,0,0,0,0,1.78093928036649,0,0.63337622438398,0,0,0,0,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.359030577639089,0,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0.391969589657511,0.69647365264322,0,0,0.290268993867255,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.432271251462318,0,0,0.576219191952599,0.621262677827163,0.235694034616795,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.249960815924213,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0,0,0,0,0,0.584580926518165,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0,0,0,1.65695355226657,0,0,0.127894371303652,0.215649622793364,0,0.54604819096007,0,0.425149840203366,0.123935764259002,0,0,0.788617450012533,0,0.352675943690684,0,0.128458450192919,0,0,0,0,0,0,0,0.490738592505128,0.471878893390961,0,0.577628330751691,0,0,0,0,0.20170506870352,0,0.261906694481422,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0.527613733078862,0,0,0,0,0,0,0.345701962667338,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.795803100645473,0.118920090777569,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.799529247399431,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.372448285775147,0.224263725161227,0,0,0,0,0,0,0,1.38385556638657,0.853818767021724,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr2:85136237..85136241,+ | |||
}} |
Latest revision as of 12:36, 29 July 2015
Short description: | p@chr2:85136237..85136241, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:85136237..85136241, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.67e-23 | 1 |
immature NK T cell | 1.67e-23 | 1 |
effector T cell | 1.67e-23 | 1 |
mature NK T cell | 1.67e-23 | 1 |
immature NK T cell stage IV | 1.67e-23 | 1 |
immature NK T cell stage I | 1.67e-23 | 1 |
immature NK T cell stage II | 1.67e-23 | 1 |
immature NK T cell stage III | 1.67e-23 | 1 |
bladder cell | 3.28e-23 | 1 |
lower urinary tract cell | 3.28e-23 | 1 |
thymocyte | 1.85e-12 | 2 |
double negative thymocyte | 1.85e-12 | 2 |
double-positive, alpha-beta thymocyte | 1.85e-12 | 2 |
DN4 thymocyte | 1.85e-12 | 2 |
DN1 thymic pro-T cell | 1.85e-12 | 2 |
DN2 thymocyte | 1.85e-12 | 2 |
DN3 thymocyte | 1.85e-12 | 2 |
immature single positive thymocyte | 1.85e-12 | 2 |
early T lineage precursor | 1.85e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.28e-23 | 1 |
wall of urinary bladder | 3.28e-23 | 1 |
mucosa of urinary bladder | 3.28e-23 | 1 |
urinary bladder | 2.59e-12 | 2 |
lower urinary tract | 2.59e-12 | 2 |
entire pharyngeal arch endoderm | 4.80e-09 | 11 |
early pharyngeal endoderm | 4.80e-09 | 11 |
thymus | 7.27e-07 | 4 |
hemolymphoid system gland | 7.27e-07 | 4 |
thymic region | 7.27e-07 | 4 |
pharyngeal gland | 7.27e-07 | 4 |
thymus primordium | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 2.32e-12 | 2 |
malignant fibroxanthoma | 2.32e-12 | 2 |
melanoma | 3.62e-12 | 2 |