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FFCP PHASE1:Mm9::chr12:104480353..104480358,-: Difference between revisions

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{{FFCP|EntrezGene=170952|HGNC=|MCL_coexpression_id=786|UniProt=D6RE30,F8VQJ2,Q3USW1,Q3V3K1,Q810F0|association_with_transcript=0bp_to_ENSMUST00000127843,NM_133364,uc007ouz.1,uc007ova.1,uc011yqu.1,uc011yqv.1,uc011yqw.1_5end|description=CAGE_peak_1_at_Prima1_5end|id=chr12:104480353..104480358,-|ontology_enrichment_celltype=CL:0000540!4.96e-10!33;CL:0000047!4.96e-10!33;CL:0000031!4.96e-10!33;CL:0000404!4.96e-10!33;CL:0000221!8.47e-09!44;CL:0000133!8.47e-09!44;CL:0002319!2.46e-08!43;CL:0000107!1.06e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-14,33;CL:0000047,7.32e-14,33;CL:0000031,7.32e-14,33;CL:0000404,7.32e-14,33;CL:0000107,1.24e-11,9;CL:0000221,1.49e-10,44;CL:0000133,1.49e-10,44;CL:0000393,1.60e-10,39;CL:0000211,1.60e-10,39;CL:0002319,7.19e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.73e-19!102;UBERON:0000924!1.73e-19!102;UBERON:0006601!1.73e-19!102;UBERON:0001017!3.57e-15!73;UBERON:0005743!3.57e-15!73;UBERON:0000073!4.34e-15!75;UBERON:0001016!4.34e-15!75;UBERON:0002346!1.28e-11!71;UBERON:0003075!1.28e-11!71;UBERON:0007284!1.28e-11!71;UBERON:0000033!9.48e-08!63;UBERON:0002410!1.06e-07!9;UBERON:0001049!4.71e-07!52;UBERON:0005068!4.71e-07!52;UBERON:0006241!4.71e-07!52;UBERON:0007135!4.71e-07!52;UBERON:0000010!6.57e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.16e-15,73;UBERON:0001016,2.92e-14,75;UBERON:0004121,1.05e-13,95;UBERON:0000924,1.05e-13,95;UBERON:0006601,1.05e-13,95;UBERON:0002410,1.24e-11,9;UBERON:0000010,5.63e-09,11;UBERON:0010371,5.66e-07,73;UBERON:0002240,5.83e-07,6;UBERON:0005174,5.83e-07,6;UBERON:0001137,5.83e-07,6;UBERON:0002346,6.81e-07,64;UBERON:0003075,6.81e-07,64;UBERON:0007284,6.81e-07,64|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.279972843250725,2.87505128729943,0,0,0,0,0,0,3.84401275633236,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0,0.210324961351382,7.42692559449889,4.41737081903227,0.857435594504678,0.575072826109418,0,0,7.2781782708557,7.21950706304344,0.923204014111357,0.548925861614458,0,10.6089539620525,3.93933827022176,6.57032465440283,4.41942878210502,3.70166370077668,2.05039390407831,0.151452386666368,0.831287161174641,0,0,0,0,0,0,1.54488862144927,0,0,0,3.80277233397037,0,0,0,0,0,0,1.7127581957859,0,1.03909497345377,2.25530924795977,2.74018930480927,2.07553947530453,2.71300752994721,1.52865319276416,0.251333182659351,0,0.578397427679647,0,0.808834249737046,1.76673214768315,2.42437626567611,5.59175283654366,0.878342391034642,1.46612694769419,0,0,0,0,4.49371918214468,20.1300265240196,2.63874139437015,1.91206752211504,3.06858548796397,7.06479351502504,10.058958310201,0.712875546952214,0.746441823660558,0,1.26265113531884,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.680364991513279,1.66547836370305,0.843315521037559,3.62184719034622,0,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,1.23469281844766,0.199034266818493,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0,0,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,0,0,0.528901133327089,0.853153002140936,2.32236671860439,1.9330119198314,1.4117846723634,1.11189021922435,0.760902504450237,0.474529061544512,1.31759163779209,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,1.32767530667157,1.02823661348756,0,0.407302655690628,0.969762435838129,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0,0.827810238914197,8.34863067936518,11.8383803458125,0,8.83648245215305,9.78075480190396,10.1514073517126,17.4492952163567,14.3381278771531,12.6995244226965,12.1722908239198,13.7635638569464,12.5670018901864,13.0444966722353,6.10510501201433,0.709700426041343,0.35613120733451,0.325773918707152,2.8044920905331,0,0.242780636154981,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0.643011105094777,0.532020700926821,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0.882113592219848,2.4732937941222,0.807322133479528,0.72375509913787,0.358117032009409,0.164140899745061,0.291480836629851,17.9862542950194,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,21.9574242143476,0.632671987162271,2.43983360552218,2.37611749807963,1.04544148007234,3.27543845619266,2.15782954215713,2.31429676030941,5.75863072364865,2.33306951925227,1.24267862617385,0,0.299033092087958,0,0,0,0,0.117357238645754,1.0416350787516,0.524296722128554,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0.0762068066549998,0,0,0,0,1.13365191807606,0.221985953374065,0,0,2.12508553435409,0,1.64836461840539,2.14368379079066,0,0.564751842617067,3.68260189205742,3.43737308063638,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0.830298780673413,1.19707462020309,1.02440163452481,0.729320151204882,0.419226325255965,0.919217542250071,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.842773567228942,0.704276676453562,1.49332219284595,0.952587382566147,1.15884325944855,0.964546102318525,1.23625770240992,0.441596760403192,0,0.354951612318675,0.476872379894642,0.581385666529314,0.658765662907314,1.01537529470012,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,0.830445126869219,0.788035859004508,0.818462086339379,1.70430525304563,1.35034627686799,0.249810577937946,1.63752125911786,2.57845264857958,2.10417165275728,2.42650561031467,0.927471342481686|short_description=p1@Prima1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170952
|HGNC=
|MCL_coexpression_id=786
|TSSclassifier=NA
|UniProt=D6RE30,F8VQJ2,Q3USW1,Q3V3K1,Q810F0
|association_with_transcript=0bp_to_ENSMUST00000127843,NM_133364,uc007ouz.1,uc007ova.1,uc011yqu.1,uc011yqv.1,uc011yqw.1_5end
|cluster_id=chr12:104480353..104480358,-
|description=CAGE_peak_1_at_Prima1_5end
|id=chr12:104480353..104480358,-
|ontology_enrichment_celltype=CL:0000540!4.96e-10!33;CL:0000047!4.96e-10!33;CL:0000031!4.96e-10!33;CL:0000404!4.96e-10!33;CL:0000221!8.47e-09!44;CL:0000133!8.47e-09!44;CL:0002319!2.46e-08!43;CL:0000107!1.06e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-14,33;CL:0000047,7.32e-14,33;CL:0000031,7.32e-14,33;CL:0000404,7.32e-14,33;CL:0000107,1.24e-11,9;CL:0000221,1.49e-10,44;CL:0000133,1.49e-10,44;CL:0000393,1.60e-10,39;CL:0000211,1.60e-10,39;CL:0002319,7.19e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.73e-19!102;UBERON:0000924!1.73e-19!102;UBERON:0006601!1.73e-19!102;UBERON:0001017!3.57e-15!73;UBERON:0005743!3.57e-15!73;UBERON:0000073!4.34e-15!75;UBERON:0001016!4.34e-15!75;UBERON:0002346!1.28e-11!71;UBERON:0003075!1.28e-11!71;UBERON:0007284!1.28e-11!71;UBERON:0000033!9.48e-08!63;UBERON:0002410!1.06e-07!9;UBERON:0001049!4.71e-07!52;UBERON:0005068!4.71e-07!52;UBERON:0006241!4.71e-07!52;UBERON:0007135!4.71e-07!52;UBERON:0000010!6.57e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.16e-15,73;UBERON:0001016,2.92e-14,75;UBERON:0004121,1.05e-13,95;UBERON:0000924,1.05e-13,95;UBERON:0006601,1.05e-13,95;UBERON:0002410,1.24e-11,9;UBERON:0000010,5.63e-09,11;UBERON:0010371,5.66e-07,73;UBERON:0002240,5.83e-07,6;UBERON:0005174,5.83e-07,6;UBERON:0001137,5.83e-07,6;UBERON:0002346,6.81e-07,64;UBERON:0003075,6.81e-07,64;UBERON:0007284,6.81e-07,64
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.279972843250725,2.87505128729943,0,0,0,0,0,0,3.84401275633236,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0,0.210324961351382,7.42692559449889,4.41737081903227,0.857435594504678,0.575072826109418,0,0,7.2781782708557,7.21950706304344,0.923204014111357,0.548925861614458,0,10.6089539620525,3.93933827022176,6.57032465440283,4.41942878210502,3.70166370077668,2.05039390407831,0.151452386666368,0.831287161174641,0,0,0,0,0,0,1.54488862144927,0,0,0,3.80277233397037,0,0,0,0,0,0,1.7127581957859,0,1.03909497345377,2.25530924795977,2.74018930480927,2.07553947530453,2.71300752994721,1.52865319276416,0.251333182659351,0,0.578397427679647,0,0.808834249737046,1.76673214768315,2.42437626567611,5.59175283654366,0.878342391034642,1.46612694769419,0,0,0,0,4.49371918214468,20.1300265240196,2.63874139437015,1.91206752211504,3.06858548796397,7.06479351502504,10.058958310201,0.712875546952214,0.746441823660558,0,1.26265113531884,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.680364991513279,1.66547836370305,0.843315521037559,3.62184719034622,0,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,1.23469281844766,0.199034266818493,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0,0,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,0,0,0.528901133327089,0.853153002140936,2.32236671860439,1.9330119198314,1.4117846723634,1.11189021922435,0.760902504450237,0.474529061544512,1.31759163779209,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,1.32767530667157,1.02823661348756,0,0.407302655690628,0.969762435838129,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0,0.827810238914197,8.34863067936518,11.8383803458125,0,8.83648245215305,9.78075480190396,10.1514073517126,17.4492952163567,14.3381278771531,12.6995244226965,12.1722908239198,13.7635638569464,12.5670018901864,13.0444966722353,6.10510501201433,0.709700426041343,0.35613120733451,0.325773918707152,2.8044920905331,0,0.242780636154981,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0.643011105094777,0.532020700926821,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0.882113592219848,2.4732937941222,0.807322133479528,0.72375509913787,0.358117032009409,0.164140899745061,0.291480836629851,17.9862542950194,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,21.9574242143476,0.632671987162271,2.43983360552218,2.37611749807963,1.04544148007234,3.27543845619266,2.15782954215713,2.31429676030941,5.75863072364865,2.33306951925227,1.24267862617385,0,0.299033092087958,0,0,0,0,0.117357238645754,1.0416350787516,0.524296722128554,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0.0762068066549998,0,0,0,0,1.13365191807606,0.221985953374065,0,0,2.12508553435409,0,1.64836461840539,2.14368379079066,0,0.564751842617067,3.68260189205742,3.43737308063638,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0.830298780673413,1.19707462020309,1.02440163452481,0.729320151204882,0.419226325255965,0.919217542250071,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.842773567228942,0.704276676453562,1.49332219284595,0.952587382566147,1.15884325944855,0.964546102318525,1.23625770240992,0.441596760403192,0,0.354951612318675,0.476872379894642,0.581385666529314,0.658765662907314,1.01537529470012,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,0.830445126869219,0.788035859004508,0.818462086339379,1.70430525304563,1.35034627686799,0.249810577937946,1.63752125911786,2.57845264857958,2.10417165275728,2.42650561031467,0.927471342481686
|short_description=p1@Prima1
}}

Latest revision as of 05:29, 26 September 2015

Short description:p1@Prima1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prima1_5end
Coexpression cluster:MCL_coexpression_mm9:786
Association with transcript: 0bp_to_ENSMUST00000127843, NM_133364, uc007ouz.1, uc007ova.1, uc011yqu.1, uc011yqv.1, uc011yqw.1_5end
EntrezGene:Prima1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prima1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A311.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.34
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.32e-1433
neuronal stem cell7.32e-1433
neuroblast7.32e-1433
electrically signaling cell7.32e-1433
autonomic neuron1.24e-119
ectodermal cell1.49e-1044
neurectodermal cell1.49e-1044
electrically responsive cell1.60e-1039
electrically active cell1.60e-1039
neural cell7.19e-1043

Uber anatomy
Ontology termp-valuen
central nervous system5.16e-1573
nervous system2.92e-1475
ectoderm-derived structure1.05e-1395
ectoderm1.05e-1395
presumptive ectoderm1.05e-1395
autonomic nervous system1.24e-119
peripheral nervous system5.63e-0911
ecto-epithelium5.66e-0773
spinal cord5.83e-076
dorsal region element5.83e-076
dorsum5.83e-076
neurectoderm6.81e-0764
neural plate6.81e-0764
presumptive neural plate6.81e-0764
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