FFCP PHASE1:Hg19::chr3:154797315..154797322,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |||
|TSSclassifier=strong | |||
|UniProt=P08473 | |||
|association_with_transcript=-113bp_to_ENST00000460393,ENST00000491597,NM_000902,uc003fab.1_5end | |||
|cluster_id=chr3:154797315..154797322,+ | |||
|coexpression_cluster_id=C4297 | |||
|description=CAGE_peak_24_at_MME_5end | |||
|id=chr3:154797315..154797322,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.45e-20!180;CL:0002620!1.27e-14!23;CL:0000057!3.07e-11!75;CL:0000188!1.85e-09!9;CL:0000680!5.06e-08!57;CL:0000056!5.06e-08!57;CL:0000355!5.06e-08!57;CL:0002551!3.28e-07!6;CL:0000187!5.61e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002588;1.88e-21;2!CL:0002521;2.77e-14;3!CL:0000594;4.72e-14;3!CL:0000680;3.28e-13;7!CL:0002566;3.63e-11;1!CL:0000148;1.08e-09;10!CL:0002569;9.26e-08;6!CL:0000136;1.96e-07;13!CL:0000147;4.62e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,2.08e-21,2;CL:0002521,2.42e-14,3;CL:0000594,3.17e-14,3;CL:0002566,6.00e-11,1;CL:0000148,1.18e-09,10;CL:0000541,1.18e-09,10;CL:0002569,9.58e-08,6;CL:0000147,4.92e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.60e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.95e-12!83;UBERON:0002329!5.95e-12!83;UBERON:0003077!5.95e-12!83;UBERON:0003059!5.95e-12!83;UBERON:0007282!5.95e-12!83;UBERON:0009618!5.95e-12!83;UBERON:0007285!5.95e-12!83;UBERON:0004290!1.47e-10!70;UBERON:0002199!2.03e-10!45;UBERON:0002416!2.03e-10!45;UBERON:0000475!1.38e-08!365;UBERON:0002097!1.45e-08!40;UBERON:0001134!6.63e-08!61;UBERON:0002036!6.63e-08!61;UBERON:0003082!6.63e-08!61;UBERON:0000486!7.10e-08!82;UBERON:0003102!8.08e-08!95;UBERON:0002385!1.85e-07!63;UBERON:0001015!1.85e-07!63;UBERON:0000383!1.85e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.77e-14;3!UBERON:0005795;3.63e-11;1!UBERON:0002331;9.00e-10;10!UBERON:0002066;3.82e-09;5!UBERON:0002072;6.19e-09;5!UBERON:0003422;9.26e-08;6!UBERON:0003104;9.11e-07;7!UBERON:0009142;9.11e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.42e-14,3;UBERON:0002331,9.56e-10,10;UBERON:0000358,9.56e-10,10;UBERON:0000307,9.56e-10,10;UBERON:0000091,9.56e-10,10;UBERON:0000087,9.56e-10,10;UBERON:0007010,9.56e-10,10;UBERON:0007806,9.56e-10,10;UBERON:0008780,9.56e-10,10;UBERON:0005728,9.56e-10,10;UBERON:0002066,3.98e-09,5;UBERON:0002072,5.72e-09,5;UBERON:0003422,9.58e-08,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.624320153660641,0,0.896692083310806,0.352303495931295,1.45685649931318,0.702254033511242,0,0.122834317311768,0.103325781175765,0,0.989067717114227,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0,0,0.901428353439581,0,0.179389635688862,0.427114777637135,0.423863802319124,0,0.103052529238439,0,0.558350568994769,0.168776332241266,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0159663086747,2.67391897890794,0,0,0.616964956219941,4.20480280981484,0.857479297891735,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,2.46972101034231,0,0,3.16780749173372,0,0,0,0,0,0,0,0,0,0.144781306667579,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0.601892199455438,0,0,0,0,0.955719759148911,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,1.40330047216537,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,1.39646318328756,1.45016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,1.09814811894422,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,3.87210650950939,2.16147890228867,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0.865615277858669,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0.899606224327209,0.155262956876259,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0.6124909547064,0.449604575675217,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.743990036333503,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0.665320713092027,0,0,3.8614456457388,0,2.34640942403454,0,1.22068853494722,0,0,0 | |||
|short_description=p24@MME | |||
}} |
Latest revision as of 04:37, 16 September 2015
Short description: | p24@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_MME_5end |
Coexpression cluster: | C4297_Smooth_tridermal_Melanocyte_Mesenchymal_Fibroblast_Skeletal_Wilms |
Association with transcript: | -113bp_to_ENST00000460393, ENST00000491597, NM_000902, uc003fab.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 2.08e-21 | 2 |
subcutaneous fat cell | 2.42e-14 | 3 |
skeletal muscle satellite cell | 3.17e-14 | 3 |
dark melanocyte | 6.00e-11 | 1 |
melanocyte | 1.18e-09 | 10 |
melanoblast | 1.18e-09 | 10 |
mesenchymal stem cell of umbilical cord | 9.58e-08 | 6 |
pigment cell | 4.92e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.42e-14 | 3 |
umbilical cord | 9.56e-10 | 10 |
blastocyst | 9.56e-10 | 10 |
blastula | 9.56e-10 | 10 |
bilaminar disc | 9.56e-10 | 10 |
inner cell mass | 9.56e-10 | 10 |
cleaving embryo | 9.56e-10 | 10 |
connecting stalk | 9.56e-10 | 10 |
inner cell mass derived epiblast | 9.56e-10 | 10 |
extraembryonic mesoderm | 9.56e-10 | 10 |
umbilical vein | 3.98e-09 | 5 |
hypodermis | 5.72e-09 | 5 |
mesenchyme of umbilical cord | 9.58e-08 | 6 |