FFCP PHASE1:Mm9::chr13:92800843..92800854,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=33|UniProt=F6TCD3|association_with_transcript=0bp_to_ENSMUST00000149630_5end|description=CAGE_peak_2_at_ENSMUST00000149630_5end|id=chr13:92800843..92800854,-|ontology_enrichment_celltype=CL:0000838!5.02e-20!12;CL:0000084!1.24e-18!11;CL:0000827!1.24e-18!11;CL:0000542!3.14e-18!13;CL:0000051!3.14e-18!13;CL:0000791!1.60e-15!9;CL:0000789!1.60e-15!9;CL:0002420!1.60e-15!9;CL:0002419!1.60e-15!9;CL:0000790!1.60e-15!9;CL:0000624!9.68e-14!8;CL:0000738!3.59e-13!17;CL:0002087!3.59e-13!17;CL:0002031!5.78e-13!25;CL:0000988!6.72e-12!32;CL:0002032!6.72e-12!32;CL:0000037!6.72e-12!32;CL:0000566!6.72e-12!32;CL:0000837!6.72e-12!32;CL:0000893!2.40e-10!6;CL:0002489!2.40e-10!6;CL:0000898!2.40e-10!6;CL:0000809!2.40e-10!6;CL:0000810!2.40e-10!6;CL:0000895!2.40e-10!6;CL:0000808!2.40e-10!6;CL:0000894!2.40e-10!6;CL:0000806!2.40e-10!6;CL:0000807!2.40e-10!6;CL:0000805!2.40e-10!6;CL:0002425!2.40e-10!6;CL:0002436!2.40e-10!6;CL:0002427!2.40e-10!6;CL:0002428!2.40e-10!6;CL:0002429!2.40e-10!6;CL:0002433!2.40e-10!6;CL:0002431!2.40e-10!6;CL:0002432!2.40e-10!6;CL:0002320!6.19e-07!46;CL:0000134!6.19e-07!46|ontology_enrichment_celltype_v019_2=CL:0000084,1.84e-24,11;CL:0000827,1.84e-24,11;CL:0000838,2.05e-22,12;CL:0000791,7.17e-21,9;CL:0000789,7.17e-21,9;CL:0002420,7.17e-21,9;CL:0002419,7.17e-21,9;CL:0000790,7.17e-21,9;CL:0000542,1.11e-20,13;CL:0000051,1.11e-20,13;CL:0000738,8.82e-16,17;CL:0002087,8.82e-16,17;CL:0000624,3.05e-15,8;CL:0002031,1.16e-10,25;CL:0000625,5.23e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0000988,2.87e-08,32;CL:0002032,2.87e-08,32;CL:0000037,2.87e-08,32;CL:0000837,2.87e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.77e-27!29;UBERON:0002370!3.22e-24!23;UBERON:0000974!3.22e-24!23;UBERON:0004807!3.22e-24!23;UBERON:0005058!3.22e-24!23;UBERON:0003351!3.22e-24!23;UBERON:0009113!3.22e-24!23;UBERON:0003295!3.22e-24!23;UBERON:0009722!3.22e-24!23;UBERON:0005562!3.22e-24!23;UBERON:0007690!3.22e-24!23;UBERON:0006562!5.67e-23!24;UBERON:0003408!5.67e-23!24;UBERON:0001557!5.67e-23!24;UBERON:0001042!5.67e-23!24;UBERON:0008814!5.67e-23!24;UBERON:0009145!5.67e-23!24;UBERON:0002193!3.28e-20!48;UBERON:0002390!5.03e-20!45;UBERON:0003061!5.03e-20!45;UBERON:0000072!8.56e-20!27;UBERON:0000065!4.08e-17!41;UBERON:0001004!1.50e-16!42;UBERON:0000063!1.22e-15!35;UBERON:0005057!1.34e-13!51;UBERON:0002405!1.69e-12!70;UBERON:0003081!5.00e-10!88;UBERON:0005911!1.87e-08!69;UBERON:0002368!1.90e-08!60;UBERON:0001041!3.17e-08!92;UBERON:0003929!6.49e-08!55;UBERON:0000077!1.98e-07!97;UBERON:0002530!2.27e-07!65;UBERON:0002384!6.19e-07!46;UBERON:0000949!7.48e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.26e-15,23;UBERON:0000974,5.26e-15,23;UBERON:0004807,5.26e-15,23;UBERON:0005058,5.26e-15,23;UBERON:0003351,5.26e-15,23;UBERON:0009113,5.26e-15,23;UBERON:0003295,5.26e-15,23;UBERON:0009722,5.26e-15,23;UBERON:0005562,5.26e-15,23;UBERON:0007690,5.26e-15,23;UBERON:0006562,2.30e-14,24;UBERON:0003408,2.30e-14,24;UBERON:0001557,2.30e-14,24;UBERON:0001042,2.30e-14,24;UBERON:0008814,2.30e-14,24;UBERON:0009145,2.30e-14,24;UBERON:0000072,1.00e-12,27;UBERON:0004177,8.07e-12,29;UBERON:0005057,8.07e-12,29;UBERON:0000077,1.02e-09,35;UBERON:0007811,1.95e-09,36;UBERON:0002193,4.31e-09,48;UBERON:0002405,4.31e-09,48;UBERON:0000029,8.81e-09,1;UBERON:0001097,8.81e-09,1;UBERON:0003968,8.81e-09,1;UBERON:0001467,8.81e-09,1;UBERON:0000065,3.15e-08,41;UBERON:0001004,5.08e-08,42;UBERON:0000153,8.01e-08,43;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,0.281577444303333,0.70219357896598,0.34243593645101,0.398860794976682,2.39681021903688,2.62261207256992,0,0,0,0.788655413395594,0.548457734422955,0.42438965179803,0.0850432901510698,0.397163804803541,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0.521472960576829,0,0,0,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0.948033361884535,0,0.410843828659309,0.649604114888975,0.179026695667481,1.39076948346885,1.20195449519969,1.62458479892035,0.706765149637033,0.762068066549998,1.71404514732629,0.779663045918019,1.34696578296461,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@ENSMUST00000149630}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=F6TCD3 | |||
|association_with_transcript=0bp_to_ENSMUST00000149630_5end | |||
|cluster_id=chr13:92800843..92800854,- | |||
|description=CAGE_peak_2_at_ENSMUST00000149630_5end | |||
|id=chr13:92800843..92800854,- | |||
|ontology_enrichment_celltype=CL:0000838!5.02e-20!12;CL:0000084!1.24e-18!11;CL:0000827!1.24e-18!11;CL:0000542!3.14e-18!13;CL:0000051!3.14e-18!13;CL:0000791!1.60e-15!9;CL:0000789!1.60e-15!9;CL:0002420!1.60e-15!9;CL:0002419!1.60e-15!9;CL:0000790!1.60e-15!9;CL:0000624!9.68e-14!8;CL:0000738!3.59e-13!17;CL:0002087!3.59e-13!17;CL:0002031!5.78e-13!25;CL:0000988!6.72e-12!32;CL:0002032!6.72e-12!32;CL:0000037!6.72e-12!32;CL:0000566!6.72e-12!32;CL:0000837!6.72e-12!32;CL:0000893!2.40e-10!6;CL:0002489!2.40e-10!6;CL:0000898!2.40e-10!6;CL:0000809!2.40e-10!6;CL:0000810!2.40e-10!6;CL:0000895!2.40e-10!6;CL:0000808!2.40e-10!6;CL:0000894!2.40e-10!6;CL:0000806!2.40e-10!6;CL:0000807!2.40e-10!6;CL:0000805!2.40e-10!6;CL:0002425!2.40e-10!6;CL:0002436!2.40e-10!6;CL:0002427!2.40e-10!6;CL:0002428!2.40e-10!6;CL:0002429!2.40e-10!6;CL:0002433!2.40e-10!6;CL:0002431!2.40e-10!6;CL:0002432!2.40e-10!6;CL:0002320!6.19e-07!46;CL:0000134!6.19e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.84e-24,11;CL:0000827,1.84e-24,11;CL:0000838,2.05e-22,12;CL:0000791,7.17e-21,9;CL:0000789,7.17e-21,9;CL:0002420,7.17e-21,9;CL:0002419,7.17e-21,9;CL:0000790,7.17e-21,9;CL:0000542,1.11e-20,13;CL:0000051,1.11e-20,13;CL:0000738,8.82e-16,17;CL:0002087,8.82e-16,17;CL:0000624,3.05e-15,8;CL:0002031,1.16e-10,25;CL:0000625,5.23e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0000988,2.87e-08,32;CL:0002032,2.87e-08,32;CL:0000037,2.87e-08,32;CL:0000837,2.87e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.77e-27!29;UBERON:0002370!3.22e-24!23;UBERON:0000974!3.22e-24!23;UBERON:0004807!3.22e-24!23;UBERON:0005058!3.22e-24!23;UBERON:0003351!3.22e-24!23;UBERON:0009113!3.22e-24!23;UBERON:0003295!3.22e-24!23;UBERON:0009722!3.22e-24!23;UBERON:0005562!3.22e-24!23;UBERON:0007690!3.22e-24!23;UBERON:0006562!5.67e-23!24;UBERON:0003408!5.67e-23!24;UBERON:0001557!5.67e-23!24;UBERON:0001042!5.67e-23!24;UBERON:0008814!5.67e-23!24;UBERON:0009145!5.67e-23!24;UBERON:0002193!3.28e-20!48;UBERON:0002390!5.03e-20!45;UBERON:0003061!5.03e-20!45;UBERON:0000072!8.56e-20!27;UBERON:0000065!4.08e-17!41;UBERON:0001004!1.50e-16!42;UBERON:0000063!1.22e-15!35;UBERON:0005057!1.34e-13!51;UBERON:0002405!1.69e-12!70;UBERON:0003081!5.00e-10!88;UBERON:0005911!1.87e-08!69;UBERON:0002368!1.90e-08!60;UBERON:0001041!3.17e-08!92;UBERON:0003929!6.49e-08!55;UBERON:0000077!1.98e-07!97;UBERON:0002530!2.27e-07!65;UBERON:0002384!6.19e-07!46;UBERON:0000949!7.48e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.26e-15,23;UBERON:0000974,5.26e-15,23;UBERON:0004807,5.26e-15,23;UBERON:0005058,5.26e-15,23;UBERON:0003351,5.26e-15,23;UBERON:0009113,5.26e-15,23;UBERON:0003295,5.26e-15,23;UBERON:0009722,5.26e-15,23;UBERON:0005562,5.26e-15,23;UBERON:0007690,5.26e-15,23;UBERON:0006562,2.30e-14,24;UBERON:0003408,2.30e-14,24;UBERON:0001557,2.30e-14,24;UBERON:0001042,2.30e-14,24;UBERON:0008814,2.30e-14,24;UBERON:0009145,2.30e-14,24;UBERON:0000072,1.00e-12,27;UBERON:0004177,8.07e-12,29;UBERON:0005057,8.07e-12,29;UBERON:0000077,1.02e-09,35;UBERON:0007811,1.95e-09,36;UBERON:0002193,4.31e-09,48;UBERON:0002405,4.31e-09,48;UBERON:0000029,8.81e-09,1;UBERON:0001097,8.81e-09,1;UBERON:0003968,8.81e-09,1;UBERON:0001467,8.81e-09,1;UBERON:0000065,3.15e-08,41;UBERON:0001004,5.08e-08,42;UBERON:0000153,8.01e-08,43;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,0.281577444303333,0.70219357896598,0.34243593645101,0.398860794976682,2.39681021903688,2.62261207256992,0,0,0,0.788655413395594,0.548457734422955,0.42438965179803,0.0850432901510698,0.397163804803541,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0.521472960576829,0,0,0,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0.948033361884535,0,0.410843828659309,0.649604114888975,0.179026695667481,1.39076948346885,1.20195449519969,1.62458479892035,0.706765149637033,0.762068066549998,1.71404514732629,0.779663045918019,1.34696578296461,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENSMUST00000149630 | |||
}} |
Latest revision as of 00:18, 2 October 2015
Short description: | p2@ENSMUST00000149630 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000149630_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000149630_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.84e-24 | 11 |
pro-T cell | 1.84e-24 | 11 |
lymphoid lineage restricted progenitor cell | 2.05e-22 | 12 |
mature alpha-beta T cell | 7.17e-21 | 9 |
alpha-beta T cell | 7.17e-21 | 9 |
immature T cell | 7.17e-21 | 9 |
mature T cell | 7.17e-21 | 9 |
immature alpha-beta T cell | 7.17e-21 | 9 |
lymphocyte | 1.11e-20 | 13 |
common lymphoid progenitor | 1.11e-20 | 13 |
leukocyte | 8.82e-16 | 17 |
nongranular leukocyte | 8.82e-16 | 17 |
CD4-positive, alpha-beta T cell | 3.05e-15 | 8 |
hematopoietic lineage restricted progenitor cell | 1.16e-10 | 25 |
CD8-positive, alpha-beta T cell | 5.23e-09 | 1 |
regulatory T cell | 1.24e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.24e-08 | 1 |
hematopoietic cell | 2.87e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.87e-08 | 32 |
hematopoietic stem cell | 2.87e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.87e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.26e-15 | 23 |
neck | 5.26e-15 | 23 |
respiratory system epithelium | 5.26e-15 | 23 |
hemolymphoid system gland | 5.26e-15 | 23 |
pharyngeal epithelium | 5.26e-15 | 23 |
thymic region | 5.26e-15 | 23 |
pharyngeal gland | 5.26e-15 | 23 |
entire pharyngeal arch endoderm | 5.26e-15 | 23 |
thymus primordium | 5.26e-15 | 23 |
early pharyngeal endoderm | 5.26e-15 | 23 |
pharynx | 2.30e-14 | 24 |
gland of gut | 2.30e-14 | 24 |
upper respiratory tract | 2.30e-14 | 24 |
chordate pharynx | 2.30e-14 | 24 |
pharyngeal arch system | 2.30e-14 | 24 |
pharyngeal region of foregut | 2.30e-14 | 24 |
segment of respiratory tract | 1.00e-12 | 27 |
hemopoietic organ | 8.07e-12 | 29 |
immune organ | 8.07e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 1.02e-09 | 35 |
craniocervical region | 1.95e-09 | 36 |
hemolymphoid system | 4.31e-09 | 48 |
immune system | 4.31e-09 | 48 |
lymph node | 8.81e-09 | 1 |
axillary lymph node | 8.81e-09 | 1 |
peripheral lymph node | 8.81e-09 | 1 |
shoulder | 8.81e-09 | 1 |
respiratory tract | 3.15e-08 | 41 |
respiratory system | 5.08e-08 | 42 |
anterior region of body | 8.01e-08 | 43 |
hematopoietic system | 1.88e-07 | 45 |
blood island | 1.88e-07 | 45 |