FFCP PHASE1:Mm9::chr13:98786192..98786197,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=110596|HGNC=|MCL_coexpression_id=11|UniProt=P97433|association_with_transcript=-130bp_to_uc007rol.1_5end|description=CAGE_peak_15_at_Rgnef_5end|id=chr13:98786192..98786197,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!2.89e-15!16;UBERON:0002113!1.02e-14!14;UBERON:0003918!1.02e-14!14;UBERON:0005095!1.02e-14!14;UBERON:0007687!1.02e-14!14;UBERON:0001008!3.31e-14!17;UBERON:0000489!5.48e-11!21;UBERON:0001301!4.27e-07!3;UBERON:0006555!4.27e-07!3;UBERON:0005103!4.27e-07!3;UBERON:0000083!4.27e-07!3;UBERON:0009201!4.27e-07!3;UBERON:0004819!4.27e-07!3;UBERON:0006553!4.27e-07!3;UBERON:0003074!4.27e-07!3;UBERON:0003060!4.27e-07!3;UBERON:0004871!9.83e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.51e-31,14;UBERON:0003918,1.51e-31,14;UBERON:0011143,1.51e-31,14;UBERON:0005095,1.51e-31,14;UBERON:0007687,1.51e-31,14;UBERON:0006554,1.01e-24,18;UBERON:0001008,1.82e-23,19;UBERON:0000489,2.63e-21,21;UBERON:0003103,9.33e-11,43;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0009569,3.36e-07,66;UBERON:0001301,5.46e-07,3;UBERON:0006555,5.46e-07,3;UBERON:0005103,5.46e-07,3;UBERON:0000083,5.46e-07,3;UBERON:0009201,5.46e-07,3;UBERON:0004819,5.46e-07,3;UBERON:0006553,5.46e-07,3;UBERON:0003074,5.46e-07,3;UBERON:0003060,5.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0.170430322578058,0.519572009205738,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0.373220911830279,1.0108910337347,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0.527853372491847,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.387904974335251,0.701358198903186,1.7706230394792,1.91893192373483,1.8839847340965,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p15@Rgnef}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110596 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=P97433 | |||
|association_with_transcript=-130bp_to_uc007rol.1_5end | |||
|cluster_id=chr13:98786192..98786197,- | |||
|description=CAGE_peak_15_at_Rgnef_5end | |||
|id=chr13:98786192..98786197,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!2.89e-15!16;UBERON:0002113!1.02e-14!14;UBERON:0003918!1.02e-14!14;UBERON:0005095!1.02e-14!14;UBERON:0007687!1.02e-14!14;UBERON:0001008!3.31e-14!17;UBERON:0000489!5.48e-11!21;UBERON:0001301!4.27e-07!3;UBERON:0006555!4.27e-07!3;UBERON:0005103!4.27e-07!3;UBERON:0000083!4.27e-07!3;UBERON:0009201!4.27e-07!3;UBERON:0004819!4.27e-07!3;UBERON:0006553!4.27e-07!3;UBERON:0003074!4.27e-07!3;UBERON:0003060!4.27e-07!3;UBERON:0004871!9.83e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.51e-31,14;UBERON:0003918,1.51e-31,14;UBERON:0011143,1.51e-31,14;UBERON:0005095,1.51e-31,14;UBERON:0007687,1.51e-31,14;UBERON:0006554,1.01e-24,18;UBERON:0001008,1.82e-23,19;UBERON:0000489,2.63e-21,21;UBERON:0003103,9.33e-11,43;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0009569,3.36e-07,66;UBERON:0001301,5.46e-07,3;UBERON:0006555,5.46e-07,3;UBERON:0005103,5.46e-07,3;UBERON:0000083,5.46e-07,3;UBERON:0009201,5.46e-07,3;UBERON:0004819,5.46e-07,3;UBERON:0006553,5.46e-07,3;UBERON:0003074,5.46e-07,3;UBERON:0003060,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0.170430322578058,0.519572009205738,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0.373220911830279,1.0108910337347,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0.527853372491847,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.387904974335251,0.701358198903186,1.7706230394792,1.91893192373483,1.8839847340965,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p15@Rgnef | |||
}} |
Latest revision as of 14:26, 25 September 2015
Short description: | p15@Rgnef |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Rgnef_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -130bp_to_uc007rol.1_5end |
EntrezGene: | Rgnef |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.51e-31 | 14 |
kidney mesenchyme | 1.51e-31 | 14 |
upper urinary tract | 1.51e-31 | 14 |
kidney rudiment | 1.51e-31 | 14 |
kidney field | 1.51e-31 | 14 |
urinary system structure | 1.01e-24 | 18 |
renal system | 1.82e-23 | 19 |
cavitated compound organ | 2.63e-21 | 21 |
compound organ | 9.33e-11 | 43 |
abdomen element | 1.64e-09 | 49 |
abdominal segment element | 1.64e-09 | 49 |
abdominal segment of trunk | 1.64e-09 | 49 |
abdomen | 1.64e-09 | 49 |
mesenchyme | 9.51e-08 | 61 |
entire embryonic mesenchyme | 9.51e-08 | 61 |
subdivision of trunk | 3.36e-07 | 66 |
epididymis | 5.46e-07 | 3 |
excretory tube | 5.46e-07 | 3 |
mesonephric epithelium | 5.46e-07 | 3 |
mesonephric tubule | 5.46e-07 | 3 |
nephric duct | 5.46e-07 | 3 |
kidney epithelium | 5.46e-07 | 3 |
renal duct | 5.46e-07 | 3 |
mesonephric duct | 5.46e-07 | 3 |
pronephric duct | 5.46e-07 | 3 |