FFCP PHASE1:Mm9::chr14:71026815..71026877,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13829|HGNC=|MCL_coexpression_id=15|UniProt=Q8JZV5,Q9WVM2|association_with_transcript=0bp_to_ENSMUST00000022695,ENSMUST00000110984,NM_001252662,NM_001252663,uc007uop.1_5end|description=CAGE_peak_1_at_Epb4.9_5end|id=chr14:71026815..71026877,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.44e-08!52;UBERON:0005068!3.44e-08!52;UBERON:0006241!3.44e-08!52;UBERON:0007135!3.44e-08!52;UBERON:0000955!4.09e-08!50;UBERON:0006238!4.09e-08!50;UBERON:0002616!9.34e-08!49;UBERON:0002346!1.06e-07!71;UBERON:0003075!1.06e-07!71;UBERON:0007284!1.06e-07!71;UBERON:0003080!4.62e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-08,54;UBERON:0001049,7.28e-08,52;UBERON:0005068,7.28e-08,52;UBERON:0006241,7.28e-08,52;UBERON:0007135,7.28e-08,52;UBERON:0000955,5.10e-07,47;UBERON:0006238,5.10e-07,47;UBERON:0002346,6.79e-07,64;UBERON:0003075,6.79e-07,64;UBERON:0007284,6.79e-07,64;UBERON:0002021,6.82e-07,10;UBERON:0000411,6.82e-07,10;UBERON:0001950,6.82e-07,10|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0,0.174840804837995,273.483114450659,396.851524084059,475.002515249012,0.788655413395594,0.822686601634433,19.0975343309114,8.1641558545027,0,0,0,0,0,0,0,0,0,0,80.0138648559135,124.858151879668,63.3926724061755,0,0,0,5.85944283031671,0,1.57057123192139,2.35292595212406,4.78131839470912,3.39857247121808,0,0,0,0,0.436050312760893,0.659058548203415,0.194429899074283,1.1198913730029,0,0,0,0,0.514518872071894,0.573066879877513,0,5.46254444320914,4.23192783417626,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,1.53687322128622,0.725827286159344,0.810035629990144,1.26194976810829,9.42648248532552,8.83474163806454,1.34739879136449,1.91690942036473,3.67687514644008,6.60695285996332,21.5791601363967,23.1945865216928,7.12185953743047,7.593474419,8.33461392890816,22.8930059181132,14.6318278608237,19.7109739632085,8.2496003932627,6.54909731675874,7.64237727883732,0.605809546665472,3.70300644523249,4.34796733052517,3.44169550792555,0,0,0,0,21.6284407002898,0,0,0,0.845060518660083,0,0,0,0,0,0,7.4219521817389,0.517875767294343,1.63286352971307,15.4401940821861,17.6589977421042,13.1450833435953,5.42601505989441,6.46737889246376,0.879666139307728,0,3.32578520915797,151.268404383429,35.7504738383774,160.551783920706,155.160081003271,1.86391761218122,9.9545470983926,7.54008144528438,0.510914110417183,0,0,0,32.0551968326321,44.8350590762254,3.76963056338593,93.1698356230602,80.0389381443935,24.7267773025876,27.7432559845866,1.62942982160506,84.9699609266935,0.252722758433675,2.31486041475121,2.34216797332867,1.60931473103431,1.80062129805349,9.94651797715719,3.33378845841506,2.8185018462667,2.81105173679186,6.72628763921441,4.31135985865684,3.21480336285293,1.05570674498369,0.657587197282725,1.11218899690239,1.0447564995665,1.85203922767149,1.99034266818493,0,0,0.284163499395593,17.6056906655177,10.3191466391682,2.88099298337624,1.65721314909647,1.77087808572663,2.00547246753592,1.86027155800326,2.95100741539581,2.10177616260905,2.96207729844265,3.11918181750281,3.97237166774693,3.36259971078264,4.17145219052996,3.35516046900929,46.4740786326721,6.79170441703277,0,1.32225283331772,4.05247676016945,7.89604684325491,4.51036114627327,2.62188582010345,2.44615848229357,2.85338439168839,0.474529061544512,1.4822905925161,2.76468729680296,2.58643413653496,1.55971269695296,0.898819408654221,1.08069024937347,1.59313018603494,2.27601481143698,7.99739588268102,2.25415471346161,1.4255592949172,0.775809948670503,0.420814919341911,0.316182685621286,0.295220295959204,0.31399745568275,0.246794327843601,0,265.784253405738,296.607523625823,362.702587276769,422.76049297364,352.359830398281,230.945647565748,186.427097068125,90.4714565404697,99.3912315740855,20.1275489138296,27.9105710751378,6.86482880852033,0.252578877947112,0.179397413521912,0,0.923765950833023,6.06372517665551,3.7481944581666,1.69745085775188,0.234690248288502,2.1775813467436,2.38043640886014,3.51240566144038,1.89162172927429,2.21464689648775,1.59454768657487,1.47476983244164,0.863424909329478,0.867894351489069,0,0,0.491764273019036,0.275936746304732,29.8624097377293,20.5120451536356,0,5.04941854408746,2.52406575533005,0.390438744296638,1.50796378412959,2.62865677747807,2.22798674082394,1.13230612315533,2.02405350837447,3.21481443702443,1.58115111178609,27.6336332122754,1.41940085208269,4.45164009168138,5.21238269931443,1.31976098378028,0,4.61283208694465,1.51161778482376,1.69744571780308,3.2483208216885,2.76691633149535,2.06742634534577,1.09060118843252,2.49548164869305,0.316036757935816,4.21674434299995,7.21948802737308,7.14923172082955,11.5239100180039,11.2542054890996,2.7863814554107,3.19212420556092,3.56737635204141,3.62007845324666,3.95804433848979,3.28540391289194,1.0591603543191,0.661585194164886,1.31909002353184,1.29171541356724,0.844380948994182,1.3130957840345,1.14898629821543,2.33184669303881,31.7077266437972,306.029747508954,16.3045625690946,90.7453184111587,410.643236270226,400.924169905767,344.08237250261,0,0,0,3.81868247206045,6.48488786841327,8.13277868507395,3.99619761040665,5.22720740036172,3.27543845619266,7.01294601201068,4.3806331534428,1.83229159388821,1.55537967950151,0,0,2.0932316446157,4.46737924234164,1.36115831840833,0.904118764344118,1.68956125490778,2.58185925020659,3.77592716047455,0.419437377702843,0,0.288030006257865,0,2.8381530140623,0.924398614483445,0.51968329191118,2.14832034800978,0.993406773906324,0.841368146639782,0.147689527174577,0.706765149637033,0.457240839929999,0.100826185136841,0.292373642219257,0.192423683280659,0.350630706544707,1.13365191807606,0,0.0897138566094757,0.503653849092235,4.63655025677257,3.94133198447482,1.46521299413812,1.92931541171159,0,67.2054692714309,58.9216302729186,71.0390436664852,44.1662678623277,81.5248198527064,88.381085994595,84.3778125289757,100.871949522225,95.159905886683,111.836227338393,3.00983307994112,37.907362973098,39.2687293234509,74.390655422898,53.2417433075075,25.1865606576519,20.4466989577486,21.0155758383672,16.6877988987744,17.6888048234658,17.997030292207,20.1830185283102,19.5710750612054,22.6649039513237,21.825478203133,23.3383908728706,22.3656749073571,24.4994709988905,18.1317796353455,18.5470639369341,21.9436321526666,17.0376773912964,20.9823847153642,17.0055307459824,18.0690010397435,18.8690575598439,19.7562210702594,22.0978557607788,22.4076787845672,19.6399795080208,20.2865880992338,24.823129558642,16.3692417267876,21.5362209248493,25.4636726495107,3.49734809113124,15.6734177658424,19.1235238102985,2.10417165275728,26.2503788752223,32.6933648224794|short_description=p1@Epb4.9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13829 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZV5,Q9WVM2 | |||
|association_with_transcript=0bp_to_ENSMUST00000022695,ENSMUST00000110984,NM_001252662,NM_001252663,uc007uop.1_5end | |||
|cluster_id=chr14:71026815..71026877,- | |||
|description=CAGE_peak_1_at_Epb4.9_5end | |||
|id=chr14:71026815..71026877,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.44e-08!52;UBERON:0005068!3.44e-08!52;UBERON:0006241!3.44e-08!52;UBERON:0007135!3.44e-08!52;UBERON:0000955!4.09e-08!50;UBERON:0006238!4.09e-08!50;UBERON:0002616!9.34e-08!49;UBERON:0002346!1.06e-07!71;UBERON:0003075!1.06e-07!71;UBERON:0007284!1.06e-07!71;UBERON:0003080!4.62e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-08,54;UBERON:0001049,7.28e-08,52;UBERON:0005068,7.28e-08,52;UBERON:0006241,7.28e-08,52;UBERON:0007135,7.28e-08,52;UBERON:0000955,5.10e-07,47;UBERON:0006238,5.10e-07,47;UBERON:0002346,6.79e-07,64;UBERON:0003075,6.79e-07,64;UBERON:0007284,6.79e-07,64;UBERON:0002021,6.82e-07,10;UBERON:0000411,6.82e-07,10;UBERON:0001950,6.82e-07,10 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0,0.174840804837995,273.483114450659,396.851524084059,475.002515249012,0.788655413395594,0.822686601634433,19.0975343309114,8.1641558545027,0,0,0,0,0,0,0,0,0,0,80.0138648559135,124.858151879668,63.3926724061755,0,0,0,5.85944283031671,0,1.57057123192139,2.35292595212406,4.78131839470912,3.39857247121808,0,0,0,0,0.436050312760893,0.659058548203415,0.194429899074283,1.1198913730029,0,0,0,0,0.514518872071894,0.573066879877513,0,5.46254444320914,4.23192783417626,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,1.53687322128622,0.725827286159344,0.810035629990144,1.26194976810829,9.42648248532552,8.83474163806454,1.34739879136449,1.91690942036473,3.67687514644008,6.60695285996332,21.5791601363967,23.1945865216928,7.12185953743047,7.593474419,8.33461392890816,22.8930059181132,14.6318278608237,19.7109739632085,8.2496003932627,6.54909731675874,7.64237727883732,0.605809546665472,3.70300644523249,4.34796733052517,3.44169550792555,0,0,0,0,21.6284407002898,0,0,0,0.845060518660083,0,0,0,0,0,0,7.4219521817389,0.517875767294343,1.63286352971307,15.4401940821861,17.6589977421042,13.1450833435953,5.42601505989441,6.46737889246376,0.879666139307728,0,3.32578520915797,151.268404383429,35.7504738383774,160.551783920706,155.160081003271,1.86391761218122,9.9545470983926,7.54008144528438,0.510914110417183,0,0,0,32.0551968326321,44.8350590762254,3.76963056338593,93.1698356230602,80.0389381443935,24.7267773025876,27.7432559845866,1.62942982160506,84.9699609266935,0.252722758433675,2.31486041475121,2.34216797332867,1.60931473103431,1.80062129805349,9.94651797715719,3.33378845841506,2.8185018462667,2.81105173679186,6.72628763921441,4.31135985865684,3.21480336285293,1.05570674498369,0.657587197282725,1.11218899690239,1.0447564995665,1.85203922767149,1.99034266818493,0,0,0.284163499395593,17.6056906655177,10.3191466391682,2.88099298337624,1.65721314909647,1.77087808572663,2.00547246753592,1.86027155800326,2.95100741539581,2.10177616260905,2.96207729844265,3.11918181750281,3.97237166774693,3.36259971078264,4.17145219052996,3.35516046900929,46.4740786326721,6.79170441703277,0,1.32225283331772,4.05247676016945,7.89604684325491,4.51036114627327,2.62188582010345,2.44615848229357,2.85338439168839,0.474529061544512,1.4822905925161,2.76468729680296,2.58643413653496,1.55971269695296,0.898819408654221,1.08069024937347,1.59313018603494,2.27601481143698,7.99739588268102,2.25415471346161,1.4255592949172,0.775809948670503,0.420814919341911,0.316182685621286,0.295220295959204,0.31399745568275,0.246794327843601,0,265.784253405738,296.607523625823,362.702587276769,422.76049297364,352.359830398281,230.945647565748,186.427097068125,90.4714565404697,99.3912315740855,20.1275489138296,27.9105710751378,6.86482880852033,0.252578877947112,0.179397413521912,0,0.923765950833023,6.06372517665551,3.7481944581666,1.69745085775188,0.234690248288502,2.1775813467436,2.38043640886014,3.51240566144038,1.89162172927429,2.21464689648775,1.59454768657487,1.47476983244164,0.863424909329478,0.867894351489069,0,0,0.491764273019036,0.275936746304732,29.8624097377293,20.5120451536356,0,5.04941854408746,2.52406575533005,0.390438744296638,1.50796378412959,2.62865677747807,2.22798674082394,1.13230612315533,2.02405350837447,3.21481443702443,1.58115111178609,27.6336332122754,1.41940085208269,4.45164009168138,5.21238269931443,1.31976098378028,0,4.61283208694465,1.51161778482376,1.69744571780308,3.2483208216885,2.76691633149535,2.06742634534577,1.09060118843252,2.49548164869305,0.316036757935816,4.21674434299995,7.21948802737308,7.14923172082955,11.5239100180039,11.2542054890996,2.7863814554107,3.19212420556092,3.56737635204141,3.62007845324666,3.95804433848979,3.28540391289194,1.0591603543191,0.661585194164886,1.31909002353184,1.29171541356724,0.844380948994182,1.3130957840345,1.14898629821543,2.33184669303881,31.7077266437972,306.029747508954,16.3045625690946,90.7453184111587,410.643236270226,400.924169905767,344.08237250261,0,0,0,3.81868247206045,6.48488786841327,8.13277868507395,3.99619761040665,5.22720740036172,3.27543845619266,7.01294601201068,4.3806331534428,1.83229159388821,1.55537967950151,0,0,2.0932316446157,4.46737924234164,1.36115831840833,0.904118764344118,1.68956125490778,2.58185925020659,3.77592716047455,0.419437377702843,0,0.288030006257865,0,2.8381530140623,0.924398614483445,0.51968329191118,2.14832034800978,0.993406773906324,0.841368146639782,0.147689527174577,0.706765149637033,0.457240839929999,0.100826185136841,0.292373642219257,0.192423683280659,0.350630706544707,1.13365191807606,0,0.0897138566094757,0.503653849092235,4.63655025677257,3.94133198447482,1.46521299413812,1.92931541171159,0,67.2054692714309,58.9216302729186,71.0390436664852,44.1662678623277,81.5248198527064,88.381085994595,84.3778125289757,100.871949522225,95.159905886683,111.836227338393,3.00983307994112,37.907362973098,39.2687293234509,74.390655422898,53.2417433075075,25.1865606576519,20.4466989577486,21.0155758383672,16.6877988987744,17.6888048234658,17.997030292207,20.1830185283102,19.5710750612054,22.6649039513237,21.825478203133,23.3383908728706,22.3656749073571,24.4994709988905,18.1317796353455,18.5470639369341,21.9436321526666,17.0376773912964,20.9823847153642,17.0055307459824,18.0690010397435,18.8690575598439,19.7562210702594,22.0978557607788,22.4076787845672,19.6399795080208,20.2865880992338,24.823129558642,16.3692417267876,21.5362209248493,25.4636726495107,3.49734809113124,15.6734177658424,19.1235238102985,2.10417165275728,26.2503788752223,32.6933648224794 | |||
|short_description=p1@Epb4.9 | |||
}} |
Latest revision as of 08:47, 26 September 2015
Short description: | p1@Epb4.9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Epb4.9_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000022695, ENSMUST00000110984, NM_001252662, NM_001252663, uc007uop.1_5end |
EntrezGene: | Epb4.9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.90e-08 | 54 |
neural tube | 7.28e-08 | 52 |
neural rod | 7.28e-08 | 52 |
future spinal cord | 7.28e-08 | 52 |
neural keel | 7.28e-08 | 52 |
brain | 5.10e-07 | 47 |
future brain | 5.10e-07 | 47 |
neurectoderm | 6.79e-07 | 64 |
neural plate | 6.79e-07 | 64 |
presumptive neural plate | 6.79e-07 | 64 |
occipital lobe | 6.82e-07 | 10 |
visual cortex | 6.82e-07 | 10 |
neocortex | 6.82e-07 | 10 |