FFCP PHASE1:Hg19::chrX:123094514..123094540,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:123094514..123094540,+
|short_description=p2@STAG2
|description=CAGE_peak_2_at_STAG2_5end
|association_with_transcript=-4bp_to_ENST00000469481_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000469481_5end | |||
|cluster_id=chrX:123094514..123094540,+ | |||
|description=CAGE_peak_2_at_STAG2_5end | |||
|id=chrX:123094514..123094540,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.40e-31!140;CL:0000037!5.08e-30!172;CL:0000566!5.08e-30!172;CL:0002032!8.67e-28!165;CL:0000837!8.67e-28!165;CL:0002031!8.16e-27!124;CL:0000988!1.73e-26!182;CL:0002087!1.27e-24!119;CL:0000542!7.13e-16!53;CL:0000051!7.13e-16!53;CL:0000838!1.13e-15!52;CL:0000763!1.01e-12!112;CL:0000049!1.01e-12!112;CL:0002057!1.97e-12!42;CL:0000860!2.36e-12!45;CL:0000766!7.98e-12!76;CL:0000839!3.96e-11!70;CL:0000557!1.22e-10!71;CL:0002009!1.30e-09!65;CL:0000945!1.55e-09!24;CL:0000826!1.55e-09!24;CL:0002194!5.19e-09!63;CL:0000576!5.19e-09!63;CL:0000040!5.19e-09!63;CL:0000559!5.19e-09!63;CL:0000791!8.80e-07!18;CL:0000789!8.80e-07!18;CL:0002420!8.80e-07!18;CL:0002419!8.80e-07!18;CL:0000790!8.80e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.66e-15;33!CL:0002057;8.66e-15;33!CL:0000473;1.42e-10;39!CL:0000234;1.42e-10;39!CL:0000945;1.63e-09;24!CL:0000542;2.57e-09;53!CL:0002087;2.59e-09;104!CL:0000576;1.08e-07;48!CL:0000738;2.08e-07;136!CL:0000791;9.67e-07;18!CL:0000789;9.67e-07;18!CL:0002419;9.67e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-31,136;CL:0000037,2.85e-30,168;CL:0002032,4.94e-28,161;CL:0000837,4.94e-28,161;CL:0000988,2.76e-27,177;CL:0002031,3.57e-27,120;CL:0002087,5.82e-25,115;CL:0000542,7.04e-16,53;CL:0000051,7.04e-16,53;CL:0000838,1.12e-15,52;CL:0000763,7.15e-13,108;CL:0000049,7.15e-13,108;CL:0000860,1.95e-12,42;CL:0002057,1.95e-12,42;CL:0000766,4.70e-12,72;CL:0000839,2.28e-11,66;CL:0000473,6.70e-11,48;CL:0000234,6.70e-11,48;CL:0000557,7.44e-11,67;CL:0002009,8.04e-10,61;CL:0000945,1.54e-09,24;CL:0000826,1.54e-09,24;CL:0002194,3.31e-09,59;CL:0000576,3.31e-09,59;CL:0000040,3.31e-09,59;CL:0000559,3.31e-09,59;CL:0000791,8.76e-07,18;CL:0000789,8.76e-07,18;CL:0002420,8.76e-07,18;CL:0002419,8.76e-07,18;CL:0000790,8.76e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-09;42!CL:0000051;2.57e-09;53!CL:0000790;9.67e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-11!102;UBERON:0003061!2.08e-11!102;UBERON:0007023!3.68e-10!115;UBERON:0002193!5.49e-10!112;UBERON:0001474!3.52e-08!86;UBERON:0002371!1.26e-07!80;UBERON:0002405!2.11e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.46e-11,98;UBERON:0003061,1.46e-11,98;UBERON:0002193,4.34e-10,108;UBERON:0007023,5.98e-10,114;UBERON:0002405,2.19e-08,93;UBERON:0001474,2.71e-08,82;UBERON:0002371,9.72e-08,76;UBERON:0004765,8.81e-07,90 | |||
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| ||
|short_description=p2@STAG2 | |||
}} | }} |
Latest revision as of 07:47, 19 September 2015
Short description: | p2@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000469481_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.46e-11 | 98 |
blood island | 1.46e-11 | 98 |
hemolymphoid system | 4.34e-10 | 108 |
adult organism | 5.98e-10 | 114 |
immune system | 2.19e-08 | 93 |
bone element | 2.71e-08 | 82 |
bone marrow | 9.72e-08 | 76 |
skeletal element | 8.81e-07 | 90 |