FFCP PHASE1:Hg19::chr5:172662303..172662320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2488 | |||
|TSSclassifier=strong | |||
|UniProt=E5RH49,E9PBU6,P52952,B4DNB6 | |||
|association_with_transcript=0bp_to_ENST00000517440,NM_001166175,NM_001166176,NM_004387_5end | |||
|cluster_id=chr5:172662303..172662320,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_NKX2-5_5end | |||
|id=chr5:172662303..172662320,- | |||
|ontology_enrichment_celltype=CL:0002548!5.76e-08!6;CL:0000077!1.06e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002548;4.29e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,3.67e-11,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.92e-10;4!UBERON:0007284;3.92e-10;4 | |||
|ontology_enrichment_disease=DOID:0050687!2.00e-13!143;DOID:162!1.58e-11!235;DOID:14566!5.72e-11!239;DOID:305!1.89e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:114;6.90e-10;2!DOID:154;7.52e-09;2!DOID:4236;7.52e-09;2!DOID:1909;7.52e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.92e-10,2;DOID:1909,4.85e-09,2;DOID:154,5.05e-09,2;DOID:4236,5.05e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.05e-14!27;UBERON:0000948!1.53e-10!24;UBERON:0005498!1.53e-10!24;UBERON:0004140!1.53e-10!24;UBERON:0009881!1.53e-10!24;UBERON:0004141!1.53e-10!24;UBERON:0003084!1.53e-10!24;UBERON:0007005!1.53e-10!24;UBERON:0004139!1.53e-10!24;UBERON:0004291!1.53e-10!24;UBERON:0003103!2.75e-09!69;UBERON:0003978!4.76e-07!3;UBERON:0009751!4.76e-07!3;UBERON:0000946!4.76e-07!3;UBERON:0002523!4.76e-07!3;UBERON:0005983!4.76e-07!3;UBERON:0002165!4.76e-07!3;UBERON:0002062!4.76e-07!3;UBERON:0007280!4.76e-07!3;UBERON:0004151!5.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.61e-26;25!UBERON:0000948;4.16e-17;22!UBERON:0003978;2.28e-13;3!UBERON:0000946;2.28e-13;3!UBERON:0004151;2.58e-13;3!UBERON:0002133;2.27e-09;2!UBERON:0002081;2.37e-09;2!UBERON:0003103;6.64e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.24e-23,27;UBERON:0000948,1.56e-15,24;UBERON:0005498,1.56e-15,24;UBERON:0004140,1.56e-15,24;UBERON:0009881,1.56e-15,24;UBERON:0004141,1.56e-15,24;UBERON:0003084,1.56e-15,24;UBERON:0007005,1.56e-15,24;UBERON:0004139,1.56e-15,24;UBERON:0004291,1.56e-15,24;UBERON:0003103,2.95e-15,68;UBERON:0003978,2.54e-13,3;UBERON:0009751,2.54e-13,3;UBERON:0000946,2.54e-13,3;UBERON:0002523,2.54e-13,3;UBERON:0005983,2.54e-13,3;UBERON:0002165,2.54e-13,3;UBERON:0002062,2.54e-13,3;UBERON:0007280,2.54e-13,3;UBERON:0004151,2.87e-13,3;UBERON:0002133,2.53e-09,2;UBERON:0002081,2.63e-09,2;UBERON:0010227,2.63e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,1.37559020970034,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,21.86642640555,0,61.4202195558728,1.8672662123986,1.0776853765575,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.951270761172991,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,1.79951384127703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91265252198832,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0.236387681767936,0,0,2.95162491386597,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,1.36965233252463,0.728341138602278,0,1.20990716048664,0,0,3.60776206594782,1.03688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,1.235585773681,0,0.137041924646751,0,0,0.977756913674015,0,0,0.19980960958213,0.864542502924636,2.40526851948423,0,0,0.124252535565433,0.471388069233591,1.22313785466253,1.67364554099733,0,0,0,0,0,0,0,14.8019672674295,23.3743632491917,2.15361907373044,44.927775112273,81.5529491459485,27.0037463504666,38.1602123724605,0,0,0.236349546921671,0.412079291905832,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950403028674658,0,0,12.1498205483472,16.5522992591358,0,0,0,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72968411574966,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05180326298053,0.380805212168795,0,0,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,3.91491437947817,1.13352962756136,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0.76872455576384,2.07258205038719,0.911579868532147,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0.970423302570136,0,0,0,0,6.81646703424512,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,2.19498765685643,0,0,0.198916222116275,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,1.61327582578091,0,0,0,0.118193840883968,0,0,0,0,0,0,1.43325506366115,0,0,2.32482850736251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,1.16969731731053,0.397901550322736,3.21084245099435,1.01651473835064,0,0,0,0,0,0,0,0,0,0,0,4.13529239111356,26.0409867413252,0,0,1.05868461514708,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,2.66066852124018,0.203977659483963,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.372448285775147,0,0,0,0.217716747896961,1.02669990325584,0,0,0.99798106963804,0.651226148887796,0.213454691755431,0,0.269475606319761,9.38563769613817,0,0,0,0.201273793591026,0 | |||
|short_description=p2@NKX2-5 | |||
}} |
Latest revision as of 01:41, 17 September 2015
Short description: | p2@NKX2-5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000517440, NM_001166175, NM_001166176, NM_004387_5end |
EntrezGene: | NKX2-5 |
HGNC: | 2488 |
UniProt: | E5RH49E9PBU6P52952B4DNB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 3.67e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.24e-23 | 27 |
heart | 1.56e-15 | 24 |
primitive heart tube | 1.56e-15 | 24 |
primary heart field | 1.56e-15 | 24 |
anterior lateral plate mesoderm | 1.56e-15 | 24 |
heart tube | 1.56e-15 | 24 |
heart primordium | 1.56e-15 | 24 |
cardiac mesoderm | 1.56e-15 | 24 |
cardiogenic plate | 1.56e-15 | 24 |
heart rudiment | 1.56e-15 | 24 |
compound organ | 2.95e-15 | 68 |
valve | 2.54e-13 | 3 |
cardiac mesenchyme | 2.54e-13 | 3 |
cardial valve | 2.54e-13 | 3 |
tunica intima | 2.54e-13 | 3 |
heart layer | 2.54e-13 | 3 |
endocardium | 2.54e-13 | 3 |
endocardial cushion | 2.54e-13 | 3 |
presumptive endocardium | 2.54e-13 | 3 |
cardiac chamber | 2.87e-13 | 3 |
atrioventricular valve | 2.53e-09 | 2 |
cardiac atrium | 2.63e-09 | 2 |
future cardiac atrium | 2.63e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.92e-10 | 2 |
melanoma | 4.85e-09 | 2 |
mixed cell type cancer | 5.05e-09 | 2 |
carcinosarcoma | 5.05e-09 | 2 |