FFCP PHASE1:Hg19::chrX:1733941..1733965,+: Difference between revisions
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|id=chrX:1733941..1733965,+
|short_description=p1@ASMT
|description=CAGE_peak_1_at_ASMT_5end
|association_with_transcript=0bp_to_NM_001171038,uc010ncy.2_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=438 | |EntrezGene=438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=750 | |HGNC=750 | ||
|TSSclassifier=strong | |||
|UniProt=P46597 | |UniProt=P46597 | ||
|association_with_transcript=0bp_to_NM_001171038,uc010ncy.2_5end | |||
|cluster_id=chrX:1733941..1733965,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_ASMT_5end | |||
|id=chrX:1733941..1733965,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.02e-52!5;CL:0000540!4.81e-12!6;CL:0000031!4.81e-12!6;CL:0000404!4.81e-12!6;CL:0000047!2.89e-09!8;CL:0000148!1.52e-07!10;CL:0000541!1.52e-07!10;CL:0000133!7.77e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3!UBERON:0006238;2.63e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.11e-34!2;UBERON:0002757!1.11e-34!2;UBERON:0010134!1.11e-34!2;UBERON:0002784!1.11e-34!2;UBERON:0005408!1.11e-34!2;UBERON:0001899!1.11e-34!2;UBERON:0003296!6.79e-18!4;UBERON:0010133!6.79e-18!4;UBERON:0001017!4.03e-12!82;UBERON:0005743!1.52e-11!86;UBERON:0001894!1.21e-10!7;UBERON:0006222!1.21e-10!7;UBERON:0003076!1.71e-10!15;UBERON:0003057!1.71e-10!15;UBERON:0000073!2.04e-10!94;UBERON:0001016!2.04e-10!94;UBERON:0002148!2.02e-09!2;UBERON:0009662!2.02e-09!2;UBERON:0002298!3.86e-09!8;UBERON:0001049!3.33e-07!57;UBERON:0005068!3.33e-07!57;UBERON:0006241!3.33e-07!57;UBERON:0007135!3.33e-07!57;UBERON:0002240!7.70e-07!3;UBERON:0001896!8.15e-07!3;UBERON:0005290!8.15e-07!3;UBERON:0010096!8.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43!UBERON:0000955;6.07e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002368,1.09e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p1@ASMT | |||
}} | }} |
Latest revision as of 06:47, 20 September 2015
Short description: | p1@ASMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ASMT_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 0bp_to_NM_001171038, uc010ncy.2_5end |
EntrezGene: | ASMT |
HGNC: | 750 |
UniProt: | P46597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
endocrine gland | 1.09e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 8.38e-07 | 11 |