FFCP PHASE1:Hg19::chr5:179050660..179050681,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3187 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5041 | |||
|TSSclassifier=strong | |||
|UniProt=D6RIT2,D6RIU0,D6R9D3,D6RDU3,E5RGV0 | |||
|association_with_transcript=0bp_to_ENST00000503105,ENST00000504348,ENST00000504779,ENST00000506721,ENST00000513230,ENST00000514332,ENST00000514731,ENST00000519056,ENST00000519455,ENST00000519707,uc003mkf.3,uc003mkg.3_5end | |||
|cluster_id=chr5:179050660..179050681,- | |||
|description=CAGE_peak_1_at_HNRNPH1_5end | |||
|id=chr5:179050660..179050681,- | |||
|ontology_enrichment_celltype=CL:0000037!1.84e-32!172;CL:0000566!1.84e-32!172;CL:0002032!1.01e-29!165;CL:0000837!1.01e-29!165;CL:0000988!5.83e-29!182;CL:0002031!2.07e-21!124;CL:0000738!5.68e-21!140;CL:0002087!4.46e-20!119;CL:0000763!4.24e-17!112;CL:0000049!4.24e-17!112;CL:0000860!8.19e-15!45;CL:0002057!6.51e-14!42;CL:0000542!4.39e-12!53;CL:0000051!4.39e-12!53;CL:0000838!1.27e-11!52;CL:0000557!7.47e-10!71;CL:0000839!1.44e-09!70;CL:0002009!8.35e-09!65;CL:0002194!4.98e-08!63;CL:0000576!4.98e-08!63;CL:0000040!4.98e-08!63;CL:0000559!4.98e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.30e-14;33!CL:0002057;9.30e-14;33!CL:0002087;6.35e-08;104!CL:0000576;8.24e-08;48!CL:0000473;1.88e-07;39!CL:0000234;1.88e-07;39!CL:0000542;2.81e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.28e-32,168;CL:0002032,2.29e-29,161;CL:0000837,2.29e-29,161;CL:0000988,3.02e-29,177;CL:0002031,4.14e-21,120;CL:0000738,1.23e-20,136;CL:0002087,8.81e-20,115;CL:0000763,8.44e-17,108;CL:0000049,8.44e-17,108;CL:0000860,6.51e-14,42;CL:0002057,6.51e-14,42;CL:0000542,4.39e-12,53;CL:0000051,4.39e-12,53;CL:0000838,1.27e-11,52;CL:0000557,1.39e-09,67;CL:0000473,1.85e-09,48;CL:0000234,1.85e-09,48;CL:0000839,2.69e-09,66;CL:0002009,1.55e-08,61;CL:0002194,9.32e-08,59;CL:0000576,9.32e-08,59;CL:0000040,9.32e-08,59;CL:0000559,9.32e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-10;42!CL:0000051;2.81e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.58e-21!235;DOID:14566!8.32e-20!239;DOID:2531!2.85e-15!51;DOID:0060083!2.85e-15!51;DOID:1240!1.01e-13!39;DOID:0050686!6.70e-12!137;DOID:8692!8.78e-12!31;DOID:0050687!7.98e-10!143;DOID:305!1.86e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.70e-11;31!DOID:1240;4.09e-11;39!DOID:2531;9.75e-10;51!DOID:0060083;9.75e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.58e-21,235;DOID:14566,8.32e-20,239;DOID:2531,2.85e-15,51;DOID:0060083,2.85e-15,51;DOID:1240,1.01e-13,39;DOID:0050686,6.70e-12,137;DOID:8692,8.78e-12,31;DOID:0050687,7.98e-10,143;DOID:305,1.86e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.82e-09!102;UBERON:0003061!8.82e-09!102;UBERON:0001474!7.89e-08!86;UBERON:0002371!2.91e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.78e-08,98;UBERON:0003061,1.78e-08,98;UBERON:0001474,1.56e-07,82;UBERON:0002371,5.69e-07,76 | |||
|phase1_expression=105.373459976923,139.593541576921,141.518221712355,101.074031336662,105.929779379267,102.063607319743,96.253953703958,144.032131141317,64.2516645371603,72.4915112679451,60.0109004456288,90.4347280618913,52.7533956456907,171.663931555585,112.343710371763,115.639925189705,121.744294660843,117.579924552367,112.712476520607,120.904879031406,76.0922578341064,50.7796648794502,261.333456250655,362.169728742852,306.198497971724,398.34308416407,434.065816421863,426.061459250946,167.179817660784,437.181684432725,166.11770031815,148.946238365586,97.8919236029313,154.926930259884,423.203316770188,356.133927380991,391.369385633351,219.382181778623,398.281272675701,309.457501640805,79.7139088294131,98.4636744697698,99.6817446744302,292.395858185705,415.66353805769,387.64932977813,368.40002349551,607.294970608237,584.41592187906,359.327798010366,419.591237294667,510.328652099567,500.57072842957,689.377642067526,708.280524888407,338.271484158061,554.545296917543,597.09029817059,566.25520088617,782.745897038592,824.744892280763,244.749664738543,321.535416086071,306.455595633007,551.687762632938,853.347377935474,833.958991405075,348.73314737636,518.35402090968,493.018677480615,463.73601901716,942.05419285619,818.688196309568,299.348740704022,291.905703852005,242.575052853191,244.090115481334,295.848478897767,408.242990210584,159.037111007617,273.908264503147,230.704826204733,221.755268021267,256.13900868194,232.161915258388,242.809496640343,283.880754808533,233.924243061475,243.925558057614,259.502621233619,537.906255808429,587.237189370939,561.177098887836,351.575734020209,539.209237588238,301.311392982688,390.272183905845,685.410770234543,496.733221582814,291.406061465952,416.202734491095,415.687173435096,506.549493860569,243.98890057853,375.917137937892,351.13122291504,464.699430220767,198.797728214248,203.15270088853,224.622177688622,266.401417145558,284.876433277557,468.288966465787,522.774778087299,528.949750453183,285.992780968657,365.209130402631,339.503916136838,605.982162386709,276.83334504764,268.897466442701,243.315723378784,386.375755553565,366.297681123945,262.354525759926,267.084740305651,253.728551048603,410.26972246233,629.554220874376,505.292345147086,212.111973693147,245.476514651531,159.828202304413,191.56275076382,98.7635683952702,114.428749979051,189.278055398162,107.546306336883,277.459688376539,225.72052661689,233.640529943715,129.800263818233,43.7154345951051,67.4827685867662,158.379128103485,153.234168823355,151.705032952025,338.179705264975,312.30922128595,434.605276555591,169.743095891166,139.358004407192,139.203341144645,143.588217248698,163.604780121863,273.192215646487,177.018736656679,151.690637632396,149.066064065732,158.992291063218,157.506262989676,141.410611663643,116.173539392929,315.822586017101,174.180518794578,386.935722654918,385.74146217176,366.099923051281,188.579464083036,152.831771190469,192.361831126928,143.640655005309,186.134526791196,43.6094052142534,96.4125586288918,215.39850034145,170.675434068239,378.050666146937,223.441080784965,160.3537936407,128.098794875646,109.027056400385,167.120326009674,225.640375716728,256.962111694357,87.9386654617051,142.31545334656,52.956643594438,133.292352806547,162.584469140168,131.215941524481,286.187873194855,331.030171232829,351.68881998243,179.859824875561,286.572462288355,163.97801472594,104.544251440821,123.880731568557,41.8674226491492,26.5888712472008,274.05119351722,370.350818821014,221.651292387346,262.06963966586,165.80989752727,119.439256830744,261.234317817528,411.699213905938,137.317401010339,146.021079898938,367.611592703393,250.82985616636,315.609661555896,135.306954553066,296.540015747905,263.664535966203,381.174999108613,140.652245125433,123.82087952321,336.54909370575,236.96893503141,238.232632196235,169.683029077375,168.284356404545,210.801377610918,437.397710180729,603.805624472687,475.814196050678,392.149771123146,363.846666962656,312.42061936891,136.11109312694,149.231897660749,71.8301591032899,100.303472454907,53.4190816435493,351.962730118536,389.936388150649,433.337831730501,351.50689109814,363.640792190226,432.069797401307,351.774882989869,390.284494134313,417.83541244378,85.6260327364592,54.6942917833439,57.2087875750646,58.8034845542168,313.084936009922,224.084605402499,217.410685658757,684.267804092708,234.538952301718,193.700057827035,167.369185248154,89.9214026060956,211.41242898166,289.524068010722,85.6875842966154,64.4759566873339,274.229549848019,185.140856745198,120.461320285953,133.972063522276,142.136552361019,176.365599121473,180.166602734715,213.763054361623,114.983341842815,143.444614530353,157.994925512918,102.169879045587,221.568427094296,283.833744679258,129.680740873724,198.79361394355,113.864655712068,887.77915468849,162.801554490455,365.31213958284,349.202647129298,309.546446761484,84.2617057257083,55.7703101315085,46.8869788840188,78.6933251704444,170.590810394814,142.963295533705,156.632885081557,155.525813987015,134.711661269484,400.867070297313,124.100847127467,42.918773502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579547319786 | |||
|short_description=p1@HNRNPH1 | |||
}} |
Latest revision as of 08:40, 17 September 2015
Short description: | p1@HNRNPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRNPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503105, ENST00000504348, ENST00000504779, ENST00000506721, ENST00000513230, ENST00000514332, ENST00000514731, ENST00000519056, ENST00000519455, ENST00000519707, uc003mkf.3, uc003mkg.3_5end |
EntrezGene: | HNRNPH1 |
HGNC: | 5041 |
UniProt: | D6RIT2D6RIU0D6R9D3D6RDU3E5RGV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.28e-32 | 168 |
hematopoietic oligopotent progenitor cell | 2.29e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-29 | 161 |
hematopoietic cell | 3.02e-29 | 177 |
hematopoietic lineage restricted progenitor cell | 4.14e-21 | 120 |
leukocyte | 1.23e-20 | 136 |
nongranular leukocyte | 8.81e-20 | 115 |
myeloid cell | 8.44e-17 | 108 |
common myeloid progenitor | 8.44e-17 | 108 |
classical monocyte | 6.51e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-14 | 42 |
lymphocyte | 4.39e-12 | 53 |
common lymphoid progenitor | 4.39e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-11 | 52 |
granulocyte monocyte progenitor cell | 1.39e-09 | 67 |
defensive cell | 1.85e-09 | 48 |
phagocyte | 1.85e-09 | 48 |
myeloid lineage restricted progenitor cell | 2.69e-09 | 66 |
macrophage dendritic cell progenitor | 1.55e-08 | 61 |
monopoietic cell | 9.32e-08 | 59 |
monocyte | 9.32e-08 | 59 |
monoblast | 9.32e-08 | 59 |
promonocyte | 9.32e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.78e-08 | 98 |
blood island | 1.78e-08 | 98 |
bone element | 1.56e-07 | 82 |
bone marrow | 5.69e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.58e-21 | 235 |
disease of cellular proliferation | 8.32e-20 | 239 |
hematologic cancer | 2.85e-15 | 51 |
immune system cancer | 2.85e-15 | 51 |
leukemia | 1.01e-13 | 39 |
organ system cancer | 6.70e-12 | 137 |
myeloid leukemia | 8.78e-12 | 31 |
cell type cancer | 7.98e-10 | 143 |
carcinoma | 1.86e-08 | 106 |