FFCP PHASE1:Hg19::chr5:81574161..81574189,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6228 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10410 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9I7,D6RDJ2,D6RD47 | |||
|association_with_transcript=0bp_to_ENST00000507980,ENST00000511844,ENST00000512493_5end | |||
|cluster_id=chr5:81574161..81574189,- | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPS23_5end | |||
|id=chr5:81574161..81574189,- | |||
|ontology_enrichment_celltype=CL:0000542!3.57e-20!53;CL:0000051!3.57e-20!53;CL:0000838!1.31e-19!52;CL:0000003!9.52e-17!722;CL:0000012!1.62e-14!682;CL:0000548!4.38e-13!679;CL:0000004!4.38e-13!679;CL:0000255!4.38e-13!679;CL:0000144!1.76e-12!625;CL:0002087!4.53e-12!119;CL:0000037!5.84e-12!172;CL:0000566!5.84e-12!172;CL:0000988!1.15e-11!182;CL:0000084!2.25e-11!25;CL:0000827!2.25e-11!25;CL:0002032!1.53e-10!165;CL:0000837!1.53e-10!165;CL:0000791!2.73e-10!18;CL:0000789!2.73e-10!18;CL:0002420!2.73e-10!18;CL:0002419!2.73e-10!18;CL:0000790!2.73e-10!18;CL:0002371!2.93e-10!591;CL:0002031!1.27e-09!124;CL:0000945!2.22e-09!24;CL:0000826!2.22e-09!24;CL:0000034!7.35e-09!444;CL:0000236!8.47e-09!14;CL:0000738!1.11e-08!140;CL:0002320!4.95e-08!365;CL:0000048!7.22e-08!430;CL:0000723!7.28e-08!436;CL:0000625!1.79e-07!11;CL:0000063!2.11e-07!578;CL:0000134!5.95e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.35e-12;53!CL:0000084;2.25e-11;25!CL:0000791;2.73e-10;18!CL:0000789;2.73e-10;18!CL:0002419;2.73e-10;18!CL:0000945;2.23e-09;24!CL:0000236;9.28e-09;13!CL:0000625;1.80e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.57e-20,53;CL:0000051,3.57e-20,53;CL:0000838,1.31e-19,52;CL:0002087,2.37e-13,115;CL:0000037,5.65e-13,168;CL:0000988,1.12e-12,177;CL:0002032,1.69e-11,161;CL:0000837,1.69e-11,161;CL:0000084,2.25e-11,25;CL:0000827,2.25e-11,25;CL:0002031,1.09e-10,120;CL:0000791,2.73e-10,18;CL:0000789,2.73e-10,18;CL:0002420,2.73e-10,18;CL:0002419,2.73e-10,18;CL:0000790,2.73e-10,18;CL:0000738,1.33e-09,136;CL:0000945,2.22e-09,24;CL:0000826,2.22e-09,24;CL:0000034,4.09e-09,441;CL:0000236,8.47e-09,14;CL:0002320,1.91e-08,361;CL:0000048,4.15e-08,427;CL:0000723,4.19e-08,433;CL:0000625,1.79e-07,11;CL:0000134,2.47e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.35e-12;53!CL:0000790;2.73e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!3.84e-10!51;DOID:0060083!3.84e-10!51;DOID:1240!1.15e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.84e-10,51;DOID:0060083,3.84e-10,51;DOID:1240,1.15e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.33e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.68e-08,371 | |||
|phase1_expression=995.59751840265,734.364796946072,881.387888812108,1015.74397828427,1297.08109602799,1696.69842937522,1177.84443348264,1326.61173419634,1923.89333732001,1002.59446092616,930.168956907246,839.251751724122,1001.25944935521,1906.74443370248,1655.66128913667,955.374033107973,899.220235811774,901.932961628406,835.340951529348,1162.38590930295,817.022768433233,1056.96932082411,1427.74510380971,823.436541238471,828.581421325698,770.476370156593,711.73000994158,722.250129334321,1335.07835562518,1361.05904565272,853.810920088159,2036.51801222082,824.701805614849,1327.41689649877,2521.40244448766,2005.43919346757,5233.13423070432,1369.4766498908,845.695934981588,756.065873574028,721.455658001036,685.68289096218,607.620764049046,794.165180213982,954.136757814244,649.397531799784,868.819739953449,924.305412273064,953.895622356919,991.963368726775,1281.31585405856,1535.95208312636,1142.83193164189,1229.64832222719,1117.26851440332,959.471204648656,1116.7319660367,1383.1730467595,1235.35458960896,1509.00828531179,1060.02095457481,886.97014620208,1149.90798618871,798.745182498269,1249.35077229605,1163.13971061684,946.066996224278,958.011160623962,1079.46964112982,1459.07465872897,1014.04416691089,1659.82730539595,1669.65555613811,1679.69078146625,1845.83053229651,2267.8775684641,1136.54108994024,1235.9558280856,793.18077035009,2499.84677535449,1701.13542340662,1776.77422366859,6379.86386172295,5551.49898347957,5836.07021459878,5094.30539699896,5474.6143307434,5433.13481488973,5803.3129381783,6860.6005488638,1382.61830196685,1740.57102929546,1606.31210458221,6144.64506563891,6068.06570283811,3174.04160562445,2130.1701005627,1985.49037340878,1481.77000328946,1337.32477663003,4633.63686472975,5750.49704845407,2828.88409648287,989.993319881652,2199.52770520713,2558.93801633541,1798.67926312723,932.632898922641,854.22979477328,1095.15644466048,1553.36344997425,1617.39102148733,3188.45768111062,3612.6038016954,2579.93672750683,1217.05564991456,3980.89448753676,3706.36562697565,2271.86381464312,3944.79552557529,5997.12969347147,5574.40124068971,4175.59862714572,3978.20783451279,3351.89139339944,2970.37062689219,4228.80918414339,2037.8409605156,1327.84057206511,1473.4434851036,292.568239576754,1061.04876005115,1387.05307087862,1248.04939318391,1446.86121009518,1212.79990325898,859.704108762238,868.156608619902,1483.25128130422,1313.96840936315,1025.64679253863,356.656022580271,1007.64076741717,1018.54486432883,773.720986472765,639.578525100208,375.872154386832,2595.01648306643,4284.81387665394,4089.37563213718,1222.38880530524,842.169668608896,925.476577285846,804.433201357866,802.08292203334,1002.25502678767,851.23649870443,1524.65887909904,730.032371033129,795.630896541621,2151.91421199706,1468.08543614245,1191.75502700771,1438.66563339338,967.309485770821,1220.72728564337,941.227130048904,851.905849856333,1042.55313476801,884.715594717496,1062.02050956457,235.886947210553,275.323987545311,1300.43246348904,996.925735100809,1243.51162454617,186.299717404199,247.253167085477,810.062584941047,870.171635420861,1073.89489704083,922.783298628595,667.547670932499,1018.27797017477,1168.26222155189,1236.13611157615,1190.95563590016,567.057865037788,1132.82891881723,1072.48702450356,1352.66000767435,1134.29982240012,1156.90593339904,1089.47690758934,1285.96712473457,1184.61415615469,812.760594728571,766.261842946925,821.173472134087,722.668121378793,847.969407343161,1404.42819871877,661.001140483587,481.814496826994,557.940556139545,1316.97805854839,795.96123608715,1690.36639345063,207.553808492013,1558.11470882027,1453.00511434996,268.881622091624,1411.20133539118,191.942202333994,1046.3489662962,187.848057784529,1296.0096056491,222.646588883309,1383.69407639104,1569.09827354021,171.824642778041,1021.42477183182,978.873299408445,1153.57403253172,894.061783296756,715.864270090954,1103.74006676671,1028.82859147969,1205.97693304273,926.004204452304,1019.12391668666,1407.71767395548,621.104643349369,962.288443536556,817.758734406685,1163.24165972011,1811.91749899066,1034.11973914828,752.562056508646,848.117814159973,963.197263871996,778.047494853982,859.868723658614,1249.88622664472,936.172610113026,986.876457567491,867.332659183962,957.851315077535,1066.38826335966,926.154881728914,344.77369471538,405.90764048786,446.637169451142,1430.34044210347,1237.14070330518,969.014992566072,1005.2028640576,1375.79745987326,1078.57534500439,1855.28726408662,899.882539267117,811.149132518071,903.514201078211,1080.00765274782,664.650618068986,1372.78055176005,1657.95112053684,1184.71260596484,685.897417428651,797.533644586137,449.3460361095,423.079711371742,404.42539258763,1975.90922044126,722.659115511494,1158.86964485927,1313.64441100538,1364.23570738454,1035.13323374607,576.90865157615,507.423125218222,509.405179883677,537.279186338432,437.051304522127,445.882213719611,400.705858410633,676.344670401971,656.918192727188,619.124333566711,709.109959569489,437.886094790046,802.410039575401,894.154101177058,1016.76199462165,1368.21183958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| |||
|short_description=p1@RPS23 | |||
}} |
Latest revision as of 23:59, 18 September 2015
Short description: | p1@RPS23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS23_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000507980, ENST00000511844, ENST00000512493_5end |
EntrezGene: | RPS23 |
HGNC: | 10410 |
UniProt: | D6R9I7D6RDJ2D6RD47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.57e-20 | 53 |
common lymphoid progenitor | 3.57e-20 | 53 |
lymphoid lineage restricted progenitor cell | 1.31e-19 | 52 |
nongranular leukocyte | 2.37e-13 | 115 |
hematopoietic stem cell | 5.65e-13 | 168 |
hematopoietic cell | 1.12e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.69e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-11 | 161 |
T cell | 2.25e-11 | 25 |
pro-T cell | 2.25e-11 | 25 |
hematopoietic lineage restricted progenitor cell | 1.09e-10 | 120 |
mature alpha-beta T cell | 2.73e-10 | 18 |
alpha-beta T cell | 2.73e-10 | 18 |
immature T cell | 2.73e-10 | 18 |
mature T cell | 2.73e-10 | 18 |
immature alpha-beta T cell | 2.73e-10 | 18 |
leukocyte | 1.33e-09 | 136 |
lymphocyte of B lineage | 2.22e-09 | 24 |
pro-B cell | 2.22e-09 | 24 |
stem cell | 4.09e-09 | 441 |
B cell | 8.47e-09 | 14 |
connective tissue cell | 1.91e-08 | 361 |
multi fate stem cell | 4.15e-08 | 427 |
somatic stem cell | 4.19e-08 | 433 |
CD8-positive, alpha-beta T cell | 1.79e-07 | 11 |
mesenchymal cell | 2.47e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.68e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.84e-10 | 51 |
immune system cancer | 3.84e-10 | 51 |
leukemia | 1.15e-07 | 39 |