FFCP PHASE1:Hg19::chr6:123038689..123038700,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5570 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9018 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C010 | |||
|association_with_transcript=-5bp_to_ENST00000354275_5end | |||
|cluster_id=chr6:123038689..123038700,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_8_at_PKIB_5end | |||
|id=chr6:123038689..123038700,+ | |||
|ontology_enrichment_celltype=CL:0000840!3.58e-23!5;CL:0001029!3.58e-23!5;CL:0000990!1.95e-21!8;CL:0000451!1.98e-17!10;CL:0001014!2.84e-12!2;CL:0001016!2.84e-12!2;CL:0000453!2.58e-10!5;CL:0000763!1.18e-08!112;CL:0000049!1.18e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.36e-92;5!CL:0000990;2.13e-61;8!CL:0000451;2.49e-50;10!CL:0001014;2.03e-45;2!CL:0001016;2.03e-45;2!CL:0000453;7.24e-19;5!CL:0000047;3.06e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,8.37e-92,5;CL:0001029,8.37e-92,5;CL:0000990,2.13e-61,8;CL:0000451,2.49e-50,10;CL:0001014,2.04e-45,2;CL:0001016,2.04e-45,2;CL:0000453,7.24e-19,5;CL:0002009,2.36e-17,61;CL:0000557,8.12e-16,67;CL:0000763,9.04e-13,108;CL:0000049,9.04e-13,108;CL:0002194,2.34e-09,59;CL:0000576,2.34e-09,59;CL:0000040,2.34e-09,59;CL:0000559,2.34e-09,59;CL:0002031,7.96e-09,120;CL:0002032,1.66e-08,161;CL:0000837,1.66e-08,161;CL:0000839,2.16e-08,66;CL:0000037,3.86e-08,168;CL:0000738,9.09e-08,136;CL:0000766,1.04e-07,72;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.73e-12!31;DOID:1240!1.33e-09!39;DOID:2531!5.54e-07!51;DOID:0060083!5.54e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.41e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.41e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001042!3.18e-08!10;UBERON:0009145!3.18e-08!10;UBERON:0006562!1.75e-07!11 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.86e-14,76;UBERON:0001474,6.09e-13,82;UBERON:0004765,8.58e-12,90;UBERON:0002405,2.06e-11,93;UBERON:0002390,7.91e-11,98;UBERON:0003061,7.91e-11,98;UBERON:0001434,1.31e-10,100;UBERON:0002193,8.08e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,4.21911611751088,3.65672448328461,5.98310822334893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0.228234679033192,0,0,0,0.321176150207399,0.403599414382095,0,0,1.53620382154229,1.3420566473545,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.64911231275102,9.2856234546954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0,0,0.435433495793923,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PKIB | |||
}} |
Latest revision as of 05:09, 20 September 2015
Short description: | p8@PKIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PKIB_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -5bp_to_ENST00000354275_5end |
EntrezGene: | PKIB |
HGNC: | 9018 |
UniProt: | Q9C010 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 8.37e-92 | 5 |
common dendritic progenitor | 8.37e-92 | 5 |
conventional dendritic cell | 2.13e-61 | 8 |
dendritic cell | 2.49e-50 | 10 |
CD1a-positive Langerhans cell | 2.04e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.04e-45 | 2 |
Langerhans cell | 7.24e-19 | 5 |
macrophage dendritic cell progenitor | 2.36e-17 | 61 |
granulocyte monocyte progenitor cell | 8.12e-16 | 67 |
myeloid cell | 9.04e-13 | 108 |
common myeloid progenitor | 9.04e-13 | 108 |
monopoietic cell | 2.34e-09 | 59 |
monocyte | 2.34e-09 | 59 |
monoblast | 2.34e-09 | 59 |
promonocyte | 2.34e-09 | 59 |
hematopoietic lineage restricted progenitor cell | 7.96e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-08 | 161 |
myeloid lineage restricted progenitor cell | 2.16e-08 | 66 |
hematopoietic stem cell | 3.86e-08 | 168 |
leukocyte | 9.09e-08 | 136 |
myeloid leukocyte | 1.04e-07 | 72 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.86e-14 | 76 |
bone element | 6.09e-13 | 82 |
skeletal element | 8.58e-12 | 90 |
immune system | 2.06e-11 | 93 |
hematopoietic system | 7.91e-11 | 98 |
blood island | 7.91e-11 | 98 |
skeletal system | 1.31e-10 | 100 |
hemolymphoid system | 8.08e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.41e-07 | 31 |