FFCP PHASE1:Mm9::chr10:38853856..38853872,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:38853856..38853872,+
|short_description=p3@Tube1
|description=CAGE_peak_3_at_Tube1_5end
|association_with_transcript=27bp_to_ENSMUST00000019991,NM_028006,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71924 | |EntrezGene=71924 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D6T1 | |UniProt=Q9D6T1 | ||
|association_with_transcript=27bp_to_ENSMUST00000019991,NM_028006,uc007evt.1,uc007evu.1,uc007evv.1_5end | |||
|cluster_id=chr10:38853856..38853872,+ | |||
|description=CAGE_peak_3_at_Tube1_5end | |||
|id=chr10:38853856..38853872,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.86e-12,43;UBERON:0002370,4.31e-12,23;UBERON:0000974,4.31e-12,23;UBERON:0004807,4.31e-12,23;UBERON:0005058,4.31e-12,23;UBERON:0003351,4.31e-12,23;UBERON:0009113,4.31e-12,23;UBERON:0003295,4.31e-12,23;UBERON:0009722,4.31e-12,23;UBERON:0005562,4.31e-12,23;UBERON:0007690,4.31e-12,23;UBERON:0006562,2.16e-11,24;UBERON:0003408,2.16e-11,24;UBERON:0001557,2.16e-11,24;UBERON:0001042,2.16e-11,24;UBERON:0008814,2.16e-11,24;UBERON:0009145,2.16e-11,24;UBERON:0004177,4.18e-11,29;UBERON:0005057,4.18e-11,29;UBERON:0007811,1.26e-10,36;UBERON:0000065,8.29e-10,41;UBERON:0000072,1.29e-09,27;UBERON:0001004,1.97e-09,42;UBERON:0000077,2.46e-08,35 | |||
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| ||
|short_description=p3@Tube1 | |||
}} | }} |
Latest revision as of 23:43, 25 September 2015
Short description: | p3@Tube1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tube1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 27bp_to_ENSMUST00000019991, NM_028006, uc007evt.1, uc007evu.1, uc007evv.1_5end |
EntrezGene: | Tube1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.86e-12 | 43 |
thymus | 4.31e-12 | 23 |
neck | 4.31e-12 | 23 |
respiratory system epithelium | 4.31e-12 | 23 |
hemolymphoid system gland | 4.31e-12 | 23 |
pharyngeal epithelium | 4.31e-12 | 23 |
thymic region | 4.31e-12 | 23 |
pharyngeal gland | 4.31e-12 | 23 |
entire pharyngeal arch endoderm | 4.31e-12 | 23 |
thymus primordium | 4.31e-12 | 23 |
early pharyngeal endoderm | 4.31e-12 | 23 |
pharynx | 2.16e-11 | 24 |
gland of gut | 2.16e-11 | 24 |
upper respiratory tract | 2.16e-11 | 24 |
chordate pharynx | 2.16e-11 | 24 |
pharyngeal arch system | 2.16e-11 | 24 |
pharyngeal region of foregut | 2.16e-11 | 24 |
hemopoietic organ | 4.18e-11 | 29 |
immune organ | 4.18e-11 | 29 |
craniocervical region | 1.26e-10 | 36 |
respiratory tract | 8.29e-10 | 41 |
segment of respiratory tract | 1.29e-09 | 27 |
respiratory system | 1.97e-09 | 42 |
mixed endoderm/mesoderm-derived structure | 2.46e-08 | 35 |