FFCP PHASE1:Hg19::chr8:134114866..134114880,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z4L6 | |||
|association_with_transcript=0bp_to_ENST00000521823,ENST00000524345_5end | |||
|cluster_id=chr8:134114866..134114880,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_11_at_SLA_5end | |||
|id=chr8:134114866..134114880,- | |||
|ontology_enrichment_celltype=CL:0000047!3.31e-29!8;CL:0000540!2.64e-22!6;CL:0000031!2.64e-22!6;CL:0000404!2.64e-22!6;CL:0002319!7.13e-09!25;CL:0002583!2.48e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.40e-34;6!CL:0000404;8.40e-34;6!CL:0002319;1.42e-13;25!CL:0000047;1.75e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.45e-44,8;CL:0000540,8.40e-34,6;CL:0000031,8.40e-34,6;CL:0000404,8.40e-34,6;CL:0002319,1.39e-13,25 | |||
|ontology_enrichment_development_v019=CL:0000031;8.40e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.01e-16!82;UBERON:0007029!2.06e-15!1;UBERON:0001882!3.17e-15!1;UBERON:0005403!3.17e-15!1;UBERON:0005743!3.54e-15!86;UBERON:0000073!1.13e-13!94;UBERON:0001016!1.13e-13!94;UBERON:0001950!4.16e-11!20;UBERON:0001869!1.04e-10!32;UBERON:0002791!2.16e-10!33;UBERON:0002619!3.64e-10!22;UBERON:0002020!4.28e-10!34;UBERON:0003528!4.28e-10!34;UBERON:0001893!4.28e-10!34;UBERON:0000956!5.08e-09!25;UBERON:0000203!5.08e-09!25;UBERON:0004121!7.56e-09!169;UBERON:0000924!1.28e-08!173;UBERON:0006601!1.28e-08!173;UBERON:0002780!2.09e-08!41;UBERON:0001890!2.09e-08!41;UBERON:0006240!2.09e-08!41;UBERON:0003080!3.29e-08!42;UBERON:0001871!5.96e-08!7;UBERON:0000955!6.92e-07!69;UBERON:0006238!6.92e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.00e-10;49!UBERON:0001950;4.37e-10;20!UBERON:0002619;2.90e-09;22!UBERON:0002114;1.21e-08;2!UBERON:0000956;2.89e-08;25!UBERON:0000203;2.89e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.52e-17,81;UBERON:0001016,3.87e-15,89;UBERON:0001950,4.44e-10,20;UBERON:0002619,2.95e-09,22;UBERON:0002114,1.21e-08,2;UBERON:0000956,2.93e-08,25;UBERON:0000203,2.93e-08,25;UBERON:0004121,6.98e-08,171;UBERON:0000924,6.98e-08,171;UBERON:0006601,6.98e-08,171;UBERON:0011216,1.33e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7265722329481,18.5589315066647,25.2949560654867,19.7761013012481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.98068990005971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0793470350025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,24.4509545335067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7683198434919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,17.8903783039555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SLA | |||
}} |
Latest revision as of 15:31, 16 September 2015
Short description: | p11@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLA_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000521823, ENST00000524345_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | B7Z4L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.45e-44 | 8 |
neuron | 8.40e-34 | 6 |
neuroblast | 8.40e-34 | 6 |
electrically signaling cell | 8.40e-34 | 6 |
neural cell | 1.39e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.52e-17 | 81 |
nervous system | 3.87e-15 | 89 |
neocortex | 4.44e-10 | 20 |
regional part of cerebral cortex | 2.95e-09 | 22 |
duodenum | 1.21e-08 | 2 |
cerebral cortex | 2.93e-08 | 25 |
pallium | 2.93e-08 | 25 |
ectoderm-derived structure | 6.98e-08 | 171 |
ectoderm | 6.98e-08 | 171 |
presumptive ectoderm | 6.98e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |