FFCP PHASE1:Hg19::chr9:26747081..26747110,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:26747081..26747110,+ | |||
|coexpression_cluster_id=C1300 | |||
|description=CAGE_peak_at_chr9:26747081..26747110,+ | |||
|id=chr9:26747081..26747110,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.92e-26!254;CL:0002368!2.18e-17!13;CL:0002076!2.17e-16!43;CL:0002202!2.83e-13!9;CL:0002632!2.83e-13!9;CL:0000223!5.88e-13!59;CL:0000068!1.81e-08!3;CL:0000069!1.81e-08!3;CL:0002328!1.81e-08!3;CL:0000307!1.81e-08!3;CL:0000377!1.81e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002202;6.37e-54;9!CL:0002632;6.37e-54;9!CL:0002368;1.60e-48;13!CL:0000307;4.00e-31;3!CL:0002328;9.48e-31;3!CL:0000159;7.04e-21;2!CL:0002076;3.09e-12;42!CL:0000319;1.78e-11;1!CL:1001319;3.63e-11;1!CL:1000600;3.63e-11;1!CL:0000313;3.63e-11;1!CL:0000082;1.18e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,5.25e-54,9;CL:0002632,5.25e-54,9;CL:0002368,1.42e-48,13;CL:0000068,6.66e-31,3;CL:0000069,6.66e-31,3;CL:0002328,6.66e-31,3;CL:0000307,6.66e-31,3;CL:0000377,6.66e-31,3;CL:0000159,6.37e-21,2;CL:0002076,2.84e-18,42;CL:0000223,6.60e-13,58;CL:0000319,1.78e-11,1;CL:1001319,2.68e-11,1;CL:1000600,2.68e-11,1;CL:0000313,3.28e-11,1;CL:0000066,6.55e-09,253;CL:0000082,1.01e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000377;4.00e-31;3!CL:0000223;7.44e-08;58 | |||
|ontology_enrichment_disease=DOID:305!8.55e-26!106;DOID:0050687!2.14e-20!143;DOID:1749!4.50e-15!14;DOID:162!5.60e-13!235;DOID:14566!1.99e-12!239;DOID:299!8.62e-11!25 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.78e-11;1!DOID:2152;3.63e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.78e-11,1;DOID:2152,3.28e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004815!1.81e-08!3;UBERON:0002031!1.81e-08!3;UBERON:0007196!4.87e-08!14;UBERON:0001558!4.87e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.73e-32;15!UBERON:0001558;3.73e-32;15!UBERON:0004815;9.48e-31;3!UBERON:0002031;9.48e-31;3!UBERON:0002185;9.97e-19;5!UBERON:0003126;1.04e-13;7!UBERON:0001005;1.04e-13;7!UBERON:0000485;1.49e-13;7!UBERON:0005178;5.22e-13;34!UBERON:0002224;5.22e-13;34!UBERON:0005181;9.09e-12;35!UBERON:0004645;3.63e-11;1!UBERON:0004911;3.63e-11;1!UBERON:0004913;3.63e-11;1!UBERON:0003703;3.63e-11;1!UBERON:0001256;3.63e-11;1!UBERON:0001259;3.63e-11;1!UBERON:0001174;3.63e-11;1!UBERON:0004914;3.63e-11;1!UBERON:0002394;8.96e-11;4!UBERON:0003928;8.96e-11;4!UBERON:0000072;1.25e-10;37!UBERON:0000065;7.55e-10;44!UBERON:0000058;2.05e-09;10!UBERON:0004802;1.18e-08;19!UBERON:0000115;1.18e-08;19!UBERON:0002048;1.70e-07;22!UBERON:0004807;1.70e-07;22!UBERON:0000117;1.70e-07;22!UBERON:0000171;1.70e-07;22!UBERON:0000170;1.70e-07;22!UBERON:0000490;7.33e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,3.33e-32,15;UBERON:0001558,3.33e-32,15;UBERON:0004815,6.66e-31,3;UBERON:0002031,6.66e-31,3;UBERON:0002185,8.08e-19,5;UBERON:0000065,5.95e-14,54;UBERON:0005178,7.32e-14,34;UBERON:0002224,7.32e-14,34;UBERON:0003126,1.29e-13,7;UBERON:0001005,1.29e-13,7;UBERON:0005181,1.90e-13,35;UBERON:0000072,8.53e-13,47;UBERON:0008947,2.48e-12,38;UBERON:0003258,2.48e-12,38;UBERON:0004645,2.68e-11,1;UBERON:0001256,2.68e-11,1;UBERON:0001259,2.68e-11,1;UBERON:0004911,3.28e-11,1;UBERON:0004913,4.91e-11,1;UBERON:0003703,4.91e-11,1;UBERON:0001174,4.91e-11,1;UBERON:0004914,4.91e-11,1;UBERON:0000485,1.03e-10,9;UBERON:0001041,4.28e-10,87;UBERON:0001004,7.44e-10,74;UBERON:0000915,8.03e-09,52;UBERON:0004802,1.01e-08,19;UBERON:0000115,1.01e-08,19;UBERON:0004921,1.54e-08,118;UBERON:0002048,1.50e-07,22;UBERON:0000117,1.50e-07,22;UBERON:0000171,1.50e-07,22;UBERON:0000170,1.50e-07,22;UBERON:0005597,1.50e-07,22;UBERON:0000118,1.50e-07,22;UBERON:0002394,1.86e-07,6;UBERON:0003928,1.86e-07,6;UBERON:0004119,4.04e-07,160;UBERON:0000925,4.04e-07,160;UBERON:0006595,4.04e-07,160;UBERON:0001048,4.09e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,1.83884244895785,2.10844143144775,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.414644220061482,0.504641701751257,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.384380134730212,3.44554323735377,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,10.0545341330368,8.71127878890581,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,1.52776196950456,0.358042349351218,0,0,0,0,0,0,0,0,0.174919999992391,0,0.910347586283997,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,3.91758739581955,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.853828638089378,0,0,0.195984794828755,0.34823682632161,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0,0.64127056201227,0,0,0,0,0,0.288109595976299,0.124252535565433,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0.194860308839388,0,0,0,2.45772908753719,0.845248493434508,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,2.65709032145778,0,0,0,0,0,0,0.261906694481422,0,1.18284868973636,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,1.4541206133713,0.294450700845729,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,4.94052820401969,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,1.70946864083046,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr9:26747081..26747110,+ | |||
}} |
Latest revision as of 01:14, 1 August 2015
Short description: | p@chr9:26747081..26747110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:26747081..26747110, + |
Coexpression cluster: | C1300_Tracheal_Bronchial_Small_Keratinocyte_Mammary_bronchial_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 5.25e-54 | 9 |
epithelial cell of lower respiratory tract | 5.25e-54 | 9 |
respiratory epithelial cell | 1.42e-48 | 13 |
duct epithelial cell | 6.66e-31 | 3 |
branched duct epithelial cell | 6.66e-31 | 3 |
bronchial epithelial cell | 6.66e-31 | 3 |
tracheal epithelial cell | 6.66e-31 | 3 |
tracheoblast | 6.66e-31 | 3 |
seromucus secreting cell | 6.37e-21 | 2 |
endo-epithelial cell | 2.84e-18 | 42 |
endodermal cell | 6.60e-13 | 58 |
mucus secreting cell | 1.78e-11 | 1 |
bladder cell | 2.68e-11 | 1 |
lower urinary tract cell | 2.68e-11 | 1 |
serous secreting cell | 3.28e-11 | 1 |
epithelial cell | 6.55e-09 | 253 |
epithelial cell of lung | 1.01e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.78e-11 | 1 |
ovary epithelial cancer | 3.28e-11 | 1 |