FFCP PHASE1:Hg19::chrX:13917521..13917525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:13917521..13917525,- | |||
|coexpression_cluster_id=C4450 | |||
|description=CAGE_peak_at_chrX:13917521..13917525,- | |||
|id=chrX:13917521..13917525,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.72e-65!57;UBERON:0005068!6.72e-65!57;UBERON:0006241!6.72e-65!57;UBERON:0007135!6.72e-65!57;UBERON:0000955!4.61e-55!69;UBERON:0006238!4.61e-55!69;UBERON:0002616!1.22e-54!59;UBERON:0002020!6.98e-53!34;UBERON:0003528!6.98e-53!34;UBERON:0001893!1.15e-52!34;UBERON:0005743!1.90e-51!86;UBERON:0001017!2.65e-51!82;UBERON:0002791!1.08e-49!33;UBERON:0002346!4.55e-49!90;UBERON:0003075!8.66e-49!86;UBERON:0007284!8.66e-49!86;UBERON:0002780!3.62e-47!41;UBERON:0001890!3.62e-47!41;UBERON:0006240!3.62e-47!41;UBERON:0001869!2.94e-46!32;UBERON:0003080!6.33e-46!42;UBERON:0000073!7.66e-46!94;UBERON:0001016!7.66e-46!94;UBERON:0003056!2.51e-38!61;UBERON:0000033!1.72e-35!123;UBERON:0007023!7.43e-35!115;UBERON:0002619!4.12e-34!22;UBERON:0000153!1.90e-33!129;UBERON:0007811!1.90e-33!129;UBERON:0001950!1.62e-32!20;UBERON:0000956!9.47e-30!25;UBERON:0000203!9.47e-30!25;UBERON:0000924!3.05e-27!173;UBERON:0006601!3.05e-27!173;UBERON:0002420!3.10e-27!9;UBERON:0007245!3.10e-27!9;UBERON:0010009!3.10e-27!9;UBERON:0010011!3.10e-27!9;UBERON:0000454!3.10e-27!9;UBERON:0002308!6.34e-27!9;UBERON:0000125!6.34e-27!9;UBERON:0004121!1.74e-26!169;UBERON:0009663!8.91e-20!7;UBERON:0003076!2.27e-19!15;UBERON:0003057!2.27e-19!15;UBERON:0001871!3.11e-17!7;UBERON:0002298!3.69e-17!8;UBERON:0000200!8.38e-16!6;UBERON:0000025!9.40e-16!194;UBERON:0004733!4.40e-15!12;UBERON:0002028!4.40e-15!12;UBERON:0007277!4.40e-15!12;UBERON:0004732!7.65e-14!13;UBERON:0000349!4.24e-13!5;UBERON:0000064!8.15e-13!219;UBERON:0006331!1.39e-12!3;UBERON:0000988!2.21e-12!3;UBERON:0002771!2.58e-12!3;UBERON:0004111!5.56e-12!241;UBERON:0000483!2.47e-11!309;UBERON:0000475!3.65e-11!365;UBERON:0000477!3.67e-11!286;UBERON:0000119!3.90e-11!312;UBERON:0002680!1.17e-10!9;UBERON:0001895!1.17e-10!9;UBERON:0010092!1.17e-10!9;UBERON:0001876!2.26e-09!2;UBERON:0000369!3.03e-09!4;UBERON:0002435!3.03e-09!4;UBERON:0000204!3.03e-09!4;UBERON:0010082!3.03e-09!4;UBERON:0001875!3.51e-09!2;UBERON:0006514!3.51e-09!2;UBERON:0002148!5.21e-09!2;UBERON:0009662!5.21e-09!2;UBERON:0001872!1.14e-07!5;UBERON:0002021!2.91e-07!5;UBERON:0005174!3.31e-07!5;UBERON:0001137!3.31e-07!5;UBERON:0000481!6.83e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;6.30e-26;2!UBERON:0001897;6.30e-26;2!UBERON:0002148;6.30e-26;2!UBERON:0006331;6.30e-26;2!UBERON:0009662;6.30e-26;2!UBERON:0010225;6.30e-26;2!UBERON:0000988;8.69e-18;3!UBERON:0002784;1.06e-13;4!UBERON:0000349;3.10e-11;5!UBERON:0002298;1.38e-09;6!UBERON:0001871;2.11e-08;6!UBERON:0001894;2.11e-08;7!UBERON:0000073;1.18e-07;53!UBERON:0002616;1.18e-07;53!UBERON:0001016;1.82e-07;83!UBERON:0000955;8.04e-07;68!UBERON:0002680;8.14e-07;9!UBERON:0002420;8.14e-07;9!UBERON:0000125;8.14e-07;9!UBERON:0007245;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0010009;8.14e-07;9!UBERON:0001895;8.14e-07;9!UBERON:0010011;8.14e-07;9!UBERON:0000454;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,5.56e-26,2;UBERON:0010225,5.56e-26,2;UBERON:0002148,7.14e-26,2;UBERON:0006331,7.14e-26,2;UBERON:0009662,7.14e-26,2;UBERON:0001876,9.18e-26,2;UBERON:0000988,9.46e-18,3;UBERON:0002784,1.00e-13,4;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0000349,3.60e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0002298,1.44e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0001894,2.03e-08,7;UBERON:0006222,2.03e-08,7;UBERON:0001871,2.35e-08,6;UBERON:0002680,8.37e-07,9;UBERON:0000125,8.37e-07,9;UBERON:0002308,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9;UBERON:0002420,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
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|short_description=p@chrX:13917521..13917525,- | |||
}} |
Latest revision as of 06:12, 1 August 2015
Short description: | p@chrX:13917521..13917525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:13917521..13917525, - |
Coexpression cluster: | C4450_brain_hippocampus_amygdala_spinal_corpus_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 5.56e-26 | 2 |
thalamic complex | 5.56e-26 | 2 |
locus ceruleus | 7.14e-26 | 2 |
brainstem nucleus | 7.14e-26 | 2 |
hindbrain nucleus | 7.14e-26 | 2 |
amygdala | 9.18e-26 | 2 |
pons | 9.46e-18 | 3 |
regional part of diencephalon | 1.00e-13 | 4 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
limbic system | 3.60e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
brainstem | 1.44e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
diencephalon | 2.03e-08 | 7 |
future diencephalon | 2.03e-08 | 7 |
temporal lobe | 2.35e-08 | 6 |
regional part of metencephalon | 8.37e-07 | 9 |
neural nucleus | 8.37e-07 | 9 |
nucleus of brain | 8.37e-07 | 9 |
metencephalon | 8.37e-07 | 9 |
future metencephalon | 8.37e-07 | 9 |
basal ganglion | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |