FFCP PHASE1:Mm9::chr8:88125923..88125936,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=469|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:88125923..88125936,+|id=chr8:88125923..88125936,+|ontology_enrichment_celltype=CL:0000181!5.10e-09!5;CL:0000417!5.10e-09!5;CL:0000668!5.10e-09!5;CL:0000412!5.10e-09!5;CL:0000182!5.10e-09!5|ontology_enrichment_celltype_v019_2=CL:0000182,4.52e-18,5;CL:0000057,5.74e-11,1;CL:0000632,5.74e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.12e-33!22;UBERON:0007499!2.12e-33!22;UBERON:0006925!2.12e-33!22;UBERON:0009497!2.12e-33!22;UBERON:0000015!2.12e-33!22;UBERON:0002423!2.12e-33!22;UBERON:0006235!2.12e-33!22;UBERON:0008835!2.12e-33!22;UBERON:0003894!2.12e-33!22;UBERON:0004161!2.12e-33!22;UBERON:0008836!2.12e-33!22;UBERON:0009854!7.35e-32!23;UBERON:0009856!7.35e-32!23;UBERON:0002365!3.78e-29!25;UBERON:0002330!3.78e-29!25;UBERON:0005256!1.84e-19!47;UBERON:0005172!1.43e-18!49;UBERON:0005173!1.43e-18!49;UBERON:0002417!1.43e-18!49;UBERON:0000916!1.43e-18!49;UBERON:0002368!1.01e-14!60;UBERON:0003914!1.59e-14!47;UBERON:0002530!2.13e-13!65;UBERON:0005057!3.24e-13!51;UBERON:0009569!3.70e-13!66;UBERON:0003929!4.25e-12!55;UBERON:0000949!7.43e-12!72;UBERON:0000490!1.02e-09!66;UBERON:0005177!1.17e-09!85;UBERON:0005911!3.36e-09!69;UBERON:0002405!4.89e-09!70;UBERON:0002100!4.85e-08!98;UBERON:0000466!9.33e-08!79|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-35,22;UBERON:0007499,1.75e-35,22;UBERON:0006925,1.75e-35,22;UBERON:0009497,1.75e-35,22;UBERON:0000015,1.75e-35,22;UBERON:0002423,1.75e-35,22;UBERON:0006235,1.75e-35,22;UBERON:0008835,1.75e-35,22;UBERON:0003894,1.75e-35,22;UBERON:0004161,1.75e-35,22;UBERON:0008836,1.75e-35,22;UBERON:0009854,6.12e-34,23;UBERON:0009856,6.12e-34,23;UBERON:0002365,3.19e-31,25;UBERON:0002330,3.19e-31,25;UBERON:0005256,2.69e-17,45;UBERON:0003914,1.49e-16,47;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003929,4.10e-14,55;UBERON:0002368,6.45e-13,60;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0002530,6.66e-12,65;UBERON:0000490,1.02e-11,66;UBERON:0009569,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0000949,1.02e-10,72;UBERON:0005177,9.73e-10,79;UBERON:0001041,1.30e-09,80;UBERON:0002100,1.67e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0,3.77792234146472,3.89865850468601,2.24013443548668,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,0,1.11642284300551,0.312037673114561,4.2938409251009,11.6608318789243,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:88125923..88125936,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=469 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:88125923..88125936,+ | |||
|description=CAGE_peak_at_chr8:88125923..88125936,+ | |||
|id=chr8:88125923..88125936,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.10e-09!5;CL:0000417!5.10e-09!5;CL:0000668!5.10e-09!5;CL:0000412!5.10e-09!5;CL:0000182!5.10e-09!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.52e-18,5;CL:0000057,5.74e-11,1;CL:0000632,5.74e-11,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.12e-33!22;UBERON:0007499!2.12e-33!22;UBERON:0006925!2.12e-33!22;UBERON:0009497!2.12e-33!22;UBERON:0000015!2.12e-33!22;UBERON:0002423!2.12e-33!22;UBERON:0006235!2.12e-33!22;UBERON:0008835!2.12e-33!22;UBERON:0003894!2.12e-33!22;UBERON:0004161!2.12e-33!22;UBERON:0008836!2.12e-33!22;UBERON:0009854!7.35e-32!23;UBERON:0009856!7.35e-32!23;UBERON:0002365!3.78e-29!25;UBERON:0002330!3.78e-29!25;UBERON:0005256!1.84e-19!47;UBERON:0005172!1.43e-18!49;UBERON:0005173!1.43e-18!49;UBERON:0002417!1.43e-18!49;UBERON:0000916!1.43e-18!49;UBERON:0002368!1.01e-14!60;UBERON:0003914!1.59e-14!47;UBERON:0002530!2.13e-13!65;UBERON:0005057!3.24e-13!51;UBERON:0009569!3.70e-13!66;UBERON:0003929!4.25e-12!55;UBERON:0000949!7.43e-12!72;UBERON:0000490!1.02e-09!66;UBERON:0005177!1.17e-09!85;UBERON:0005911!3.36e-09!69;UBERON:0002405!4.89e-09!70;UBERON:0002100!4.85e-08!98;UBERON:0000466!9.33e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-35,22;UBERON:0007499,1.75e-35,22;UBERON:0006925,1.75e-35,22;UBERON:0009497,1.75e-35,22;UBERON:0000015,1.75e-35,22;UBERON:0002423,1.75e-35,22;UBERON:0006235,1.75e-35,22;UBERON:0008835,1.75e-35,22;UBERON:0003894,1.75e-35,22;UBERON:0004161,1.75e-35,22;UBERON:0008836,1.75e-35,22;UBERON:0009854,6.12e-34,23;UBERON:0009856,6.12e-34,23;UBERON:0002365,3.19e-31,25;UBERON:0002330,3.19e-31,25;UBERON:0005256,2.69e-17,45;UBERON:0003914,1.49e-16,47;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003929,4.10e-14,55;UBERON:0002368,6.45e-13,60;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0002530,6.66e-12,65;UBERON:0000490,1.02e-11,66;UBERON:0009569,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0000949,1.02e-10,72;UBERON:0005177,9.73e-10,79;UBERON:0001041,1.30e-09,80;UBERON:0002100,1.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0,3.77792234146472,3.89865850468601,2.24013443548668,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,0,1.11642284300551,0.312037673114561,4.2938409251009,11.6608318789243,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:88125923..88125936,+ | |||
}} |
Latest revision as of 07:06, 4 August 2015
Short description: | p@chr8:88125923..88125936, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:88125923..88125936, + |
Coexpression cluster: | MCL_coexpression_mm9:469 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.52e-18 | 5 |
fibroblast | 5.74e-11 | 1 |
hepatic stellate cell | 5.74e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.75e-35 | 22 |
epithelial sac | 1.75e-35 | 22 |
digestive gland | 1.75e-35 | 22 |
epithelium of foregut-midgut junction | 1.75e-35 | 22 |
anatomical boundary | 1.75e-35 | 22 |
hepatobiliary system | 1.75e-35 | 22 |
foregut-midgut junction | 1.75e-35 | 22 |
hepatic diverticulum | 1.75e-35 | 22 |
liver primordium | 1.75e-35 | 22 |
septum transversum | 1.75e-35 | 22 |
liver bud | 1.75e-35 | 22 |
digestive tract diverticulum | 6.12e-34 | 23 |
sac | 6.12e-34 | 23 |
exocrine gland | 3.19e-31 | 25 |
exocrine system | 3.19e-31 | 25 |
trunk mesenchyme | 2.69e-17 | 45 |
epithelial tube | 1.49e-16 | 47 |
abdomen element | 7.21e-16 | 49 |
abdominal segment element | 7.21e-16 | 49 |
abdominal segment of trunk | 7.21e-16 | 49 |
abdomen | 7.21e-16 | 49 |
gut epithelium | 4.10e-14 | 55 |
endocrine gland | 6.45e-13 | 60 |
mesenchyme | 1.06e-12 | 61 |
entire embryonic mesenchyme | 1.06e-12 | 61 |
gland | 6.66e-12 | 65 |
unilaminar epithelium | 1.02e-11 | 66 |
subdivision of trunk | 1.02e-11 | 66 |
endo-epithelium | 3.39e-11 | 69 |
endocrine system | 1.02e-10 | 72 |
trunk region element | 9.73e-10 | 79 |
foregut | 1.30e-09 | 80 |
trunk | 1.67e-08 | 90 |